All the results are generated and the files (if any) are written. Here is the java thread dump of the hanging process text file attached). It looks similar for all the models I've tried. Clearly java is waiting for something to clean up and close. I will try Jeremy's suggestion.
Is it possible that it is trying to read/write to a directory to which I don't have access? Charles On Wednesday, March 17, 2021 at 4:50:16 PM UTC-4 se...@tisue.net wrote: > Does it generate results and then hang, or does it hang before any runs > even occur...? > > Seth > -- You received this message because you are subscribed to the Google Groups "netlogo-devel" group. To unsubscribe from this group and stop receiving emails from it, send an email to netlogo-devel+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/netlogo-devel/293ba050-cc07-4956-b17d-cf93d689494fn%40googlegroups.com.
2021-03-18 09:13:54 Full thread dump OpenJDK 64-Bit Server VM (11.0.2+9 mixed mode): Threads class SMR info: _java_thread_list=0x00001555000026e0, length=11, elements={ 0x000015554c4a8800, 0x000015554c4b7000, 0x000015554c4cd800, 0x000015554c4cf800, 0x000015554c4d2000, 0x000015554c4d4000, 0x000015554c562800, 0x000015554c574000, 0x000015554c010000, 0x000015554eecd800, 0x0000155500001800 } "Reference Handler" #2 daemon prio=10 os_prio=0 cpu=3.15ms elapsed=230.95s tid=0x000015554c4a8800 nid=0x8cfc waiting on condition [0x00001555241e5000] java.lang.Thread.State: RUNNABLE at java.lang.ref.Reference.waitForReferencePendingList(java.base@11.0.2/Native Method) at java.lang.ref.Reference.processPendingReferences(java.base@11.0.2/Reference.java:241) at java.lang.ref.Reference$ReferenceHandler.run(java.base@11.0.2/Reference.java:213) Locked ownable synchronizers: - None "Finalizer" #3 daemon prio=8 os_prio=0 cpu=2.60ms elapsed=230.95s tid=0x000015554c4b7000 nid=0x8cfd in Object.wait() [0x0000155513ffe000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(java.base@11.0.2/Native Method) - waiting on <0x00000000c00024b0> (a java.lang.ref.ReferenceQueue$Lock) at java.lang.ref.ReferenceQueue.remove(java.base@11.0.2/ReferenceQueue.java:155) - waiting to re-lock in wait() <0x00000000c00024b0> (a java.lang.ref.ReferenceQueue$Lock) at java.lang.ref.ReferenceQueue.remove(java.base@11.0.2/ReferenceQueue.java:176) at java.lang.ref.Finalizer$FinalizerThread.run(java.base@11.0.2/Finalizer.java:170) Locked ownable synchronizers: - None "Signal Dispatcher" #4 daemon prio=9 os_prio=0 cpu=0.47ms elapsed=230.94s tid=0x000015554c4cd800 nid=0x8cfe runnable [0x0000000000000000] java.lang.Thread.State: RUNNABLE Locked ownable synchronizers: - None "C2 CompilerThread0" #5 daemon prio=9 os_prio=0 cpu=2362.63ms elapsed=230.94s tid=0x000015554c4cf800 nid=0x8cff waiting on condition [0x0000000000000000] java.lang.Thread.State: RUNNABLE No compile task Locked ownable synchronizers: - None "C1 CompilerThread0" #17 daemon prio=9 os_prio=0 cpu=835.88ms elapsed=230.94s tid=0x000015554c4d2000 nid=0x8d00 waiting on condition [0x0000000000000000] java.lang.Thread.State: RUNNABLE No compile task Locked ownable synchronizers: - None "Sweeper thread" #23 daemon prio=9 os_prio=0 cpu=141.36ms elapsed=230.94s tid=0x000015554c4d4000 nid=0x8d01 runnable [0x0000000000000000] java.lang.Thread.State: RUNNABLE Locked ownable synchronizers: - None "Service Thread" #24 daemon prio=9 os_prio=0 cpu=0.11ms elapsed=230.92s tid=0x000015554c562800 nid=0x8d04 runnable [0x0000000000000000] java.lang.Thread.State: RUNNABLE Locked ownable synchronizers: - None "Common-Cleaner" #25 daemon prio=8 os_prio=0 cpu=3.74ms elapsed=230.92s tid=0x000015554c574000 nid=0x8d06 in Object.wait() [0x0000155513559000] java.lang.Thread.State: TIMED_WAITING (on object monitor) at java.lang.Object.wait(java.base@11.0.2/Native Method) - waiting on <no object reference available> at java.lang.ref.ReferenceQueue.remove(java.base@11.0.2/ReferenceQueue.java:155) - waiting to re-lock in wait() <0x00000000c0004dd0> (a java.lang.ref.ReferenceQueue$Lock) at jdk.internal.ref.CleanerImpl.run(java.base@11.0.2/CleanerImpl.java:148) at java.lang.Thread.run(java.base@11.0.2/Thread.java:834) at jdk.internal.misc.InnocuousThread.run(java.base@11.0.2/InnocuousThread.java:134) Locked ownable synchronizers: - None "DestroyJavaVM" #99 prio=5 os_prio=0 cpu=3657.83ms elapsed=226.60s tid=0x000015554c010000 nid=0x8cf5 in Object.wait() [0x0000155555539000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(java.base@11.0.2/Native Method) - waiting on <no object reference available> at java.lang.Thread.join(java.base@11.0.2/Thread.java:1305) - waiting to re-lock in wait() <0x00000000c080b8e0> (a java.util.prefs.FileSystemPreferences$4$1) at java.lang.Thread.join(java.base@11.0.2/Thread.java:1379) at java.lang.ApplicationShutdownHooks.runHooks(java.base@11.0.2/ApplicationShutdownHooks.java:107) at java.lang.ApplicationShutdownHooks$1.run(java.base@11.0.2/ApplicationShutdownHooks.java:46) at java.lang.Shutdown.runHooks(java.base@11.0.2/Shutdown.java:130) at java.lang.Shutdown.shutdown(java.base@11.0.2/Shutdown.java:186) - locked <0x00000000c0825408> (a java.lang.Class for java.lang.Shutdown) Locked ownable synchronizers: - None "Sync Timer Thread" #28 prio=5 os_prio=0 cpu=0.59ms elapsed=226.60s tid=0x000015554eecd800 nid=0x8d9b runnable [0x0000155511f51000] java.lang.Thread.State: RUNNABLE at java.util.prefs.FileSystemPreferences.lockFile0(java.prefs@11.0.2/Native Method) at java.util.prefs.FileSystemPreferences.lockFile(java.prefs@11.0.2/FileSystemPreferences.java:921) at java.util.prefs.FileSystemPreferences.sync(java.prefs@11.0.2/FileSystemPreferences.java:748) - locked <0x00000000c04db088> (a java.io.File) - locked <0x00000000c043df78> (a java.util.prefs.FileSystemPreferences) at java.util.prefs.FileSystemPreferences.flush(java.prefs@11.0.2/FileSystemPreferences.java:843) at java.util.prefs.FileSystemPreferences.syncWorld(java.prefs@11.0.2/FileSystemPreferences.java:483) at java.util.prefs.FileSystemPreferences$4$1.run(java.prefs@11.0.2/FileSystemPreferences.java:461) Locked ownable synchronizers: - None "Attach Listener" #100 daemon prio=9 os_prio=0 cpu=0.64ms elapsed=0.15s tid=0x0000155500001800 nid=0x8f49 waiting on condition [0x0000000000000000] java.lang.Thread.State: RUNNABLE Locked ownable synchronizers: - None "VM Thread" os_prio=0 cpu=125.14ms elapsed=230.95s tid=0x000015554c4a0800 nid=0x8cfb runnable "GC Thread#0" os_prio=0 cpu=33.20ms elapsed=230.98s tid=0x000015554c03b000 nid=0x8cf6 runnable "GC Thread#1" os_prio=0 cpu=42.10ms elapsed=230.06s tid=0x0000155518001000 nid=0x8d0f runnable "GC Thread#2" os_prio=0 cpu=47.34ms elapsed=230.05s tid=0x0000155518002800 nid=0x8d10 runnable "GC Thread#3" os_prio=0 cpu=54.12ms elapsed=230.05s tid=0x0000155518004000 nid=0x8d11 runnable "GC Thread#4" os_prio=0 cpu=47.06ms elapsed=230.05s tid=0x0000155518005800 nid=0x8d12 runnable "GC Thread#5" os_prio=0 cpu=40.68ms elapsed=230.05s tid=0x0000155518007000 nid=0x8d13 runnable "GC Thread#6" os_prio=0 cpu=46.12ms elapsed=230.05s tid=0x0000155518008800 nid=0x8d14 runnable "GC Thread#7" os_prio=0 cpu=54.92ms elapsed=230.05s tid=0x000015551800a800 nid=0x8d15 runnable "GC Thread#8" os_prio=0 cpu=43.19ms elapsed=230.05s tid=0x000015551800c000 nid=0x8d16 runnable "GC Thread#9" os_prio=0 cpu=51.61ms elapsed=230.05s tid=0x000015551800d800 nid=0x8d17 runnable "GC Thread#10" os_prio=0 cpu=56.13ms elapsed=230.05s tid=0x000015551800f000 nid=0x8d18 runnable "GC Thread#11" os_prio=0 cpu=42.12ms elapsed=230.05s tid=0x0000155518010800 nid=0x8d19 runnable "GC Thread#12" os_prio=0 cpu=42.81ms elapsed=230.05s tid=0x0000155518012000 nid=0x8d1a runnable "GC Thread#13" os_prio=0 cpu=49.12ms elapsed=230.05s tid=0x0000155518013800 nid=0x8d1b runnable "GC Thread#14" os_prio=0 cpu=57.79ms elapsed=230.05s tid=0x0000155518015800 nid=0x8d1c runnable "GC Thread#15" os_prio=0 cpu=49.15ms elapsed=230.05s tid=0x0000155518017000 nid=0x8d1d runnable "GC Thread#16" os_prio=0 cpu=49.51ms elapsed=230.05s tid=0x0000155518019000 nid=0x8d1e runnable "GC Thread#17" os_prio=0 cpu=29.33ms elapsed=230.05s tid=0x000015551801a800 nid=0x8d1f runnable "GC Thread#18" os_prio=0 cpu=42.10ms elapsed=230.05s tid=0x000015551801c800 nid=0x8d20 runnable "GC Thread#19" os_prio=0 cpu=48.25ms elapsed=230.05s tid=0x000015551801e000 nid=0x8d21 runnable "GC Thread#20" os_prio=0 cpu=49.91ms elapsed=230.05s tid=0x0000155518020000 nid=0x8d22 runnable "GC Thread#21" os_prio=0 cpu=43.95ms elapsed=230.05s tid=0x0000155518021800 nid=0x8d23 runnable "GC Thread#22" os_prio=0 cpu=42.69ms elapsed=230.05s tid=0x0000155518023000 nid=0x8d24 runnable "GC Thread#23" os_prio=0 cpu=47.03ms elapsed=230.05s tid=0x0000155518025000 nid=0x8d25 runnable "GC Thread#24" os_prio=0 cpu=17.44ms elapsed=228.11s tid=0x0000155518031000 nid=0x8d55 runnable "GC Thread#25" os_prio=0 cpu=47.44ms elapsed=228.11s tid=0x0000155518032800 nid=0x8d56 runnable "GC Thread#26" os_prio=0 cpu=48.87ms elapsed=228.11s tid=0x0000155518034000 nid=0x8d57 runnable "GC Thread#27" os_prio=0 cpu=48.37ms elapsed=228.11s tid=0x0000155518035800 nid=0x8d58 runnable "GC Thread#28" os_prio=0 cpu=39.22ms elapsed=228.11s tid=0x0000155518037000 nid=0x8d59 runnable "GC Thread#29" os_prio=0 cpu=37.25ms elapsed=228.11s tid=0x0000155518038800 nid=0x8d5a runnable "GC Thread#30" os_prio=0 cpu=39.75ms elapsed=228.11s tid=0x000015551803a000 nid=0x8d5b runnable "GC Thread#31" os_prio=0 cpu=34.26ms elapsed=228.11s tid=0x000015551803b800 nid=0x8d5c runnable "GC Thread#32" os_prio=0 cpu=42.36ms elapsed=228.11s tid=0x000015551803d800 nid=0x8d5d runnable "GC Thread#33" os_prio=0 cpu=49.99ms elapsed=228.11s tid=0x000015551803f000 nid=0x8d5e runnable "GC Thread#34" os_prio=0 cpu=24.54ms elapsed=227.52s tid=0x0000155518045800 nid=0x8d72 runnable "GC Thread#35" os_prio=0 cpu=24.31ms elapsed=227.52s tid=0x0000155518047000 nid=0x8d73 runnable "GC Thread#36" os_prio=0 cpu=24.18ms elapsed=227.52s tid=0x0000155518048800 nid=0x8d74 runnable "GC Thread#37" os_prio=0 cpu=22.53ms elapsed=227.52s tid=0x000015551804a000 nid=0x8d75 runnable "GC Thread#38" os_prio=0 cpu=29.60ms elapsed=227.52s tid=0x000015551804b800 nid=0x8d76 runnable "GC Thread#39" os_prio=0 cpu=19.97ms elapsed=227.52s tid=0x000015551804d000 nid=0x8d77 runnable "GC Thread#40" os_prio=0 cpu=31.85ms elapsed=227.52s tid=0x000015551804e800 nid=0x8d78 runnable "GC Thread#41" os_prio=0 cpu=32.84ms elapsed=227.52s tid=0x0000155518050000 nid=0x8d79 runnable "GC Thread#42" os_prio=0 cpu=24.11ms elapsed=227.52s tid=0x0000155518051800 nid=0x8d7a runnable "G1 Main Marker" os_prio=0 cpu=3.27ms elapsed=230.98s tid=0x000015554c058800 nid=0x8cf7 runnable "G1 Conc#0" os_prio=0 cpu=6.91ms elapsed=230.98s tid=0x000015554c05a800 nid=0x8cf8 runnable "G1 Conc#1" os_prio=0 cpu=6.09ms elapsed=230.04s tid=0x0000155528001000 nid=0x8d26 runnable "G1 Conc#2" os_prio=0 cpu=5.89ms elapsed=230.04s tid=0x0000155528003000 nid=0x8d27 runnable "G1 Conc#3" os_prio=0 cpu=6.16ms elapsed=230.04s tid=0x0000155528004800 nid=0x8d28 runnable "G1 Conc#4" os_prio=0 cpu=5.24ms elapsed=230.04s tid=0x0000155528006000 nid=0x8d29 runnable "G1 Conc#5" os_prio=0 cpu=6.24ms elapsed=230.04s tid=0x0000155528007800 nid=0x8d2a runnable "G1 Conc#6" os_prio=0 cpu=6.17ms elapsed=230.04s tid=0x0000155528009000 nid=0x8d2b runnable "G1 Conc#7" os_prio=0 cpu=6.30ms elapsed=230.04s tid=0x000015552800b000 nid=0x8d2c runnable "G1 Conc#8" os_prio=0 cpu=4.62ms elapsed=230.04s tid=0x000015552800c800 nid=0x8d2d runnable "G1 Conc#9" os_prio=0 cpu=5.00ms elapsed=230.04s tid=0x000015552800e800 nid=0x8d2e runnable "G1 Conc#10" os_prio=0 cpu=5.54ms elapsed=230.04s tid=0x0000155528010000 nid=0x8d2f runnable "G1 Refine#0" os_prio=0 cpu=0.33ms elapsed=230.96s tid=0x000015554c43a000 nid=0x8cf9 runnable "G1 Young RemSet Sampling" os_prio=0 cpu=54.93ms elapsed=230.96s tid=0x000015554c43c000 nid=0x8cfa runnable "VM Periodic Task Thread" os_prio=0 cpu=99.30ms elapsed=230.92s tid=0x000015554c565000 nid=0x8d05 waiting on condition JNI global refs: 32, weak refs: 0