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• • [jira] [Commented] (CTAKES-410) Create cTAKES 4.0.0 Release ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-410) Create cTAKES 4.0.0 Release ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-410) Create cTAKES 4.0.0 Release ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-410) Create cTAKES 4.0.0 Release ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-410) Create cTAKES 4.0.0 Release ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-410) Create cTAKES 4.0.0 Release ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-410) Create cTAKES 4.0.0 Release ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-410) Create cTAKES 4.0.0 Release ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-410) Create cTAKES 4.0.0 Release ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-410) Create cTAKES 4.0.0 Release ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-410) Create cTAKES 4.0.0 Release ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-410) Create cTAKES 4.0.0 Release ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-410) Create cTAKES 4.0.0 Release ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-410) Create cTAKES 4.0.0 Release ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-410) Create cTAKES 4.0.0 Release ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-410) Create cTAKES 4.0.0 Release ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-410) Create cTAKES 4.0.0 Release ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-410) Create cTAKES 4.0.0 Release ASF subversion and git services (JIRA)
• [jira] [Updated] (CTAKES-410) Create cTAKES 4.0.0 Release Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-410) Create cTAKES 4.0.0 Release James Joseph Masanz (JIRA)
• Build failed in Jenkins: ctakes-trunk-package #547 Apache Jenkins Server
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• Build failed in Jenkins: ctakes-trunk-package » Apache cTAKES Distribution #547 Apache Jenkins Server
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• [jira] [Resolved] (CTAKES-348) Upgrade to Java 8 Sean Finan (JIRA)
• [jira] [Updated] (CTAKES-348) Upgrade to Java 8 Sean Finan (JIRA)
• [jira] [Resolved] (CTAKES-235) Improve Dictionary Lookup Component Sean Finan (JIRA)
• [jira] [Updated] (CTAKES-235) Improve Dictionary Lookup Component Sean Finan (JIRA)
• [jira] [Commented] (CTAKES-328) Clean up XML Annotator Descriptors Sean Finan (JIRA)
• [jira] [Commented] (CTAKES-155) SimpleSegmentWithTagsAnnotator assumes all section names are 5 characters Sean Finan (JIRA)
• [jira] [Assigned] (CTAKES-188) GSoC: Create an interface for cTAKES Sean Finan (JIRA)
• [jira] [Resolved] (CTAKES-403) Build your own Dictionary not working Sean Finan (JIRA)
• [jira] [Updated] (CTAKES-403) Build your own Dictionary not working Sean Finan (JIRA)
• [jira] [Assigned] (CTAKES-237) Consolidate the rx_norm index lookup into the same umls dictionary Sean Finan (JIRA)
• [jira] [Resolved] (CTAKES-237) Consolidate the rx_norm index lookup into the same umls dictionary Sean Finan (JIRA)
• [jira] [Updated] (CTAKES-237) Consolidate the rx_norm index lookup into the same umls dictionary Sean Finan (JIRA)
• [jira] [Resolved] (CTAKES-236) Use UmlsConcept instead of OntologyConcept for Drugs Sean Finan (JIRA)
• [jira] [Updated] (CTAKES-236) Use UmlsConcept instead of OntologyConcept for Drugs Sean Finan (JIRA)
• [jira] [Resolved] (CTAKES-409) I got AnalysisEngineProcessException, when i tried to convert clinical note to snomed ct using ctakes in multi threaded environment Sean Finan (JIRA)
• [jira] [Commented] (CTAKES-231) missing NEs because of inconsistent chunking for parallel sentence constructions Sean Finan (JIRA)
• [jira] [Commented] (CTAKES-38) Orange Book is not the most recent and lucene index too old Sean Finan (JIRA)
• [jira] [Updated] (CTAKES-38) Orange Book is not the most recent and lucene index too old Sean Finan (JIRA)
• [jira] [Updated] (CTAKES-72) Housekeeping - clean up eclipse launch files Sean Finan (JIRA)
• [jira] [Commented] (CTAKES-72) Housekeeping - clean up eclipse launch files Sean Finan (JIRA)
  • [jira] [Commented] (CTAKES-72) Housekeeping - clean up eclipse launch files ASF subversion and git services (Jira)
• [jira] [Resolved] (CTAKES-238) update the umls dictionaries to the latest versions (2013) Sean Finan (JIRA)
• [jira] [Commented] (CTAKES-238) update the umls dictionaries to the latest versions (2013) Sean Finan (JIRA)
• [jira] [Updated] (CTAKES-238) update the umls dictionaries to the latest versions (2013) Sean Finan (JIRA)
• [jira] [Assigned] (CTAKES-238) update the umls dictionaries to the latest versions (2013) Sean Finan (JIRA)
• [jira] [Resolved] (CTAKES-151) LVG is not thread safe for multiple instances inside of a single JVM. Sean Finan (JIRA)
• [jira] [Assigned] (CTAKES-151) LVG is not thread safe for multiple instances inside of a single JVM. Sean Finan (JIRA)
  • [jira] [Assigned] (CTAKES-151) LVG is not thread safe for multiple instances inside of a single JVM. Sean Finan (JIRA)
• [jira] [Reopened] (CTAKES-349) JdbcWriterTemplate does not store rows if there are fewer than 100 per note Sean Finan (JIRA)
• [jira] [Updated] (CTAKES-349) JdbcWriterTemplate does not store rows if there are fewer than 100 per note Sean Finan (JIRA)
• [jira] [Closed] (CTAKES-416) Temporal , Smoking and Side effects Sean Finan (JIRA)
• [jira] [Closed] (CTAKES-391) how to get DrugMention information from CAS object Sean Finan (JIRA)
• [jira] [Updated] (CTAKES-391) how to get DrugMention information from CAS object Sean Finan (JIRA)
• [jira] [Updated] (CTAKES-382) Add ability to easily add extension of UmlsConcept Type to jcas via dictionary lookup Sean Finan (JIRA)
• [jira] [Reopened] (CTAKES-382) Add ability to easily add extension of UmlsConcept Type to jcas via dictionary lookup Sean Finan (JIRA)
• [jira] [Assigned] (CTAKES-410) Create cTAKES 3.2.3 Release Sean Finan (JIRA)
• [jira] [Updated] (CTAKES-410) Create cTAKES 3.2.3 Release Sean Finan (JIRA)
• [jira] [Updated] (CTAKES-373) MaxentParserWrapper can't handle section dividers: "==========" Sean Finan (JIRA)
• [jira] [Reopened] (CTAKES-373) MaxentParserWrapper can't handle section dividers: "==========" Sean Finan (JIRA)
• [jira] [Resolved] (CTAKES-78) Update Chunker unit tests James Joseph Masanz (JIRA)
• [jira] [Resolved] (CTAKES-77) Update POSTagger Unit Tests James Joseph Masanz (JIRA)
• [jira] [Resolved] (CTAKES-275) some of the older junit tests don't have the right Project name in the run configurations James Joseph Masanz (JIRA)
• [jira] [Commented] (CTAKES-74) Tokenizer PennTreeBank breaks with certain apostrophes in tokens. James Joseph Masanz (JIRA)
• [jira] [Closed] (CTAKES-118) Location of CPE Descriptor not changed in 3.1 update Sean Finan (JIRA)
• [jira] [Closed] (CTAKES-120) Inconsistent or missing paths for AE and CPE directories Sean Finan (JIRA)
• [jira] [Closed] (CTAKES-126) On MS command prompt testing different versions with the CPE leads to errors as the first CTAKES_HOME sticks Sean Finan (JIRA)
• [jira] [Closed] (CTAKES-127) Dependency Parser name includes full path in xmls Sean Finan (JIRA)
• [jira] [Closed] (CTAKES-164) UMLS password could not be set in shell as ctakes.umlspw Sean Finan (JIRA)
• [jira] [Resolved] (CTAKES-429) Upgrade all dictionary databases to hsqldb 2.3 James Joseph Masanz (JIRA)
• [jira] [Closed] (CTAKES-349) JdbcWriterTemplate does not store rows if there are fewer than 100 per note Sean Finan (JIRA)
  • [jira] [Closed] (CTAKES-349) JdbcWriterTemplate does not store rows if there are fewer than 100 per note Sean Finan (JIRA)
• [jira] [Assigned] (CTAKES-429) Upgrade all dictionary databases to hsqldb 2.3 Sean Finan (JIRA)
• [jira] [Resolved] (CTAKES-424) Dictionary Creation GUI Sean Finan (JIRA)
• [jira] [Resolved] (CTAKES-425) Ctakes Pipeline Creator GUI Sean Finan (JIRA)
• [jira] [Resolved] (CTAKES-426) simple pipeline description files Sean Finan (JIRA)
• [jira] [Resolved] (CTAKES-430) new coreference annotator using mention-synchronous paradigm James Joseph Masanz (JIRA)
• [jira] [Commented] (CTAKES-430) new coreference annotator using mention-synchronous paradigm ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-430) new coreference annotator using mention-synchronous paradigm ASF subversion and git services (JIRA)
• [jira] [Created] (CTAKES-430) new coreference annotator using mention-synchronous paradigm James Joseph Masanz (JIRA)
• [jira] [Created] (CTAKES-429) Upgrade all dictionary databases to hsqldb 2.3 Sean Finan (JIRA)
• Build failed in Jenkins: ctakes-trunk-package » Apache cTAKES Distribution #542 Apache Jenkins Server
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• Build failed in Jenkins: ctakes-trunk-package » Apache cTAKES Temporal Information Extraction #541 Apache Jenkins Server
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• [jira] [Commented] (CTAKES-424) Dictionary Creation GUI ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-424) Dictionary Creation GUI ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-424) Dictionary Creation GUI ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-424) Dictionary Creation GUI ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-424) Dictionary Creation GUI ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-424) Dictionary Creation GUI ASF subversion and git services (JIRA)
• [jira] [Resolved] (CTAKES-138) Remove 3rd party jars from our SVN James Joseph Masanz (JIRA)
• [jira] [Commented] (CTAKES-138) Remove 3rd party jars from our SVN ASF subversion and git services (JIRA)
• [jira] [Commented] (CTAKES-76) get third party dependencies into Maven Central ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-76) get third party dependencies into Maven Central James Joseph Masanz (JIRA)
  • [jira] [Commented] (CTAKES-76) get third party dependencies into Maven Central James Joseph Masanz (JIRA)
• [jira] [Closed] (CTAKES-46) ctakes running problem (run cvd - ClassNotFoundException) James Joseph Masanz (JIRA)
• [jira] [Closed] (CTAKES-96) Update Dependency Parser and Semantic Role Labeler - Thanks Jinho Choi and Lee Beecker James Joseph Masanz (JIRA)
• [jira] [Closed] (CTAKES-220) some named entities not found, e.g."coronary artery disease" (chunker not labeling chunks correctly) James Joseph Masanz (JIRA)
• [jira] [Closed] (CTAKES-264) chunk adjuster iterates inefficiently James Joseph Masanz (JIRA)
• [jira] [Closed] (CTAKES-25) retrain rest of models using OpenNLP 1.5 James Joseph Masanz (JIRA)
• [jira] [Created] (CTAKES-428) Improve timeline visualization tool that is in sandbox and release it James Joseph Masanz (JIRA)
• [jira] [Closed] (CTAKES-82) Add ctakes-temporal module James Joseph Masanz (JIRA)
• Build failed in Jenkins: ctakes-trunk-compiletest #988 Apache Jenkins Server
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• Build failed in Jenkins: ctakes-trunk-compiletest » Apache cTAKES Temporal Information Extraction #988 Apache Jenkins Server
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• [jira] [Reopened] (CTAKES-302) Element type "hibernate-mapping" must be followed by either attribute specifications, ">" or "/>". James Joseph Masanz (JIRA)
• [jira] [Created] (CTAKES-427) Improve the newer Sentence Detector (SentenceDetectorAnnotatorBIO) James Joseph Masanz (JIRA)
• [jira] [Resolved] (CTAKES-380) New Sentence Detector James Joseph Masanz (JIRA)
• [jira] [Updated] (CTAKES-380) New Sentence Detector James Joseph Masanz (JIRA)
• [jira] [Commented] (CTAKES-380) Placeholder - New Sentence Detector ASF subversion and git services (JIRA)
• [jira] [Updated] (CTAKES-380) Placeholder - New Sentence Detector James Joseph Masanz (JIRA)
• Build failed in Jenkins: ctakes-trunk-package » Apache cTAKES YTEX UIMA #536 Apache Jenkins Server
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• [jira] [Updated] (CTAKES-165) no maven profiles for running via maven other than mvn -PrunCPE and mvn -RrunCVD which are in ctakes-clinical-pipeline James Joseph Masanz (JIRA)
• [jira] [Commented] (CTAKES-165) no maven profiles for running via maven other than mvn -PrunCPE and mvn -RrunCVD which are in ctakes-clinical-pipeline James Joseph Masanz (JIRA)
• [jira] [Closed] (CTAKES-59) Add cTAKES GUI (web interface) James Joseph Masanz (JIRA)
• [jira] [Closed] (CTAKES-421) Incorporate dictionary builder GUI into cTAKES James Joseph Masanz (JIRA)
• [jira] [Updated] (CTAKES-39) Upgrade LVG to a later version James Joseph Masanz (JIRA)
• [jira] [Resolved] (CTAKES-39) Upgrade LVG to a later version James Joseph Masanz (JIRA)
• [jira] [Resolved] (CTAKES-417) Update OpenNLP to 1.7.2 James Joseph Masanz (JIRA)
• Build failed in Jenkins: ctakes-trunk-package » Apache cTAKES YTEX #535 Apache Jenkins Server
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• [jira] [Commented] (CTAKES-330) runctakesCVD.sh autoload pipeline ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-330) runctakesCVD.sh autoload pipeline James Joseph Masanz (JIRA)
  • [jira] [Commented] (CTAKES-330) runctakesCVD.sh autoload pipeline ASF subversion and git services (JIRA)
• [jira] [Commented] (CTAKES-178) parsing of medication strength does not verify a number was discovered (strength value includes both the dosage and strength value in some cases) ASF subversion and git services (JIRA)
• [jira] [Resolved] (CTAKES-178) parsing of medication strength does not verify a number was discovered (strength value includes both the dosage and strength value in some cases) James Joseph Masanz (JIRA)
• [jira] [Closed] (CTAKES-122) include LVG with a future version of cTAKES? James Joseph Masanz (JIRA)
• [jira] [Assigned] (CTAKES-39) Upgrade LVG to a later version James Joseph Masanz (JIRA)
• [jira] [Resolved] (CTAKES-423) Remove redundant entries from pom.xml James Joseph Masanz (JIRA)
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• [jira] [Commented] (CTAKES-39) Upgrade LVG to a later version ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-39) Upgrade LVG to a later version ASF subversion and git services (JIRA)
• [jira] [Commented] (CTAKES-425) Ctakes Pipeline Creator GUI Brian Wilson (JIRA)
• [jira] [Created] (CTAKES-426) simple pipeline description files Sean Finan (JIRA)
• [jira] [Created] (CTAKES-425) Ctakes Pipeline Creator GUI Sean Finan (JIRA)
• [jira] [Created] (CTAKES-424) Dictionary Creation GUI Sean Finan (JIRA)
• [jira] [Updated] (CTAKES-371) update PTB tokenization logic in fast dictionary module James Joseph Masanz (JIRA)
• [jira] [Updated] (CTAKES-364) Dictionary-Lookup-Fast will fail with URI is not Hierarchical James Joseph Masanz (JIRA)
• [jira] [Updated] (CTAKES-387) Upgrade gov.nih.nlm.nls lvg artifact across the codebase James Joseph Masanz (JIRA)
• [jira] [Commented] (CTAKES-417) Update OpenNLP to 1.7.2 ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-417) Update OpenNLP to 1.7.2 ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-417) Update OpenNLP to 1.7.2 ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-417) Update OpenNLP to 1.7.2 ASF subversion and git services (JIRA)
• [jira] [Commented] (CTAKES-355) Upgrade to UIMA 2.9 ASF subversion and git services (JIRA)
• [jira] [Resolved] (CTAKES-282) Dirty on check-out in Eclipse James Joseph Masanz (JIRA)
• [jira] [Closed] (CTAKES-282) Dirty on check-out in Eclipse James Joseph Masanz (JIRA)
• [jira] [Updated] (CTAKES-417) Update OpenNLP to 1.7.2 James Joseph Masanz (JIRA)
  • [jira] [Updated] (CTAKES-417) Update OpenNLP to 1.7.2 James Joseph Masanz (JIRA)
• [jira] [Assigned] (CTAKES-417) Update OpenNLP to 1.7.2 James Joseph Masanz (JIRA)
• [jira] [Reopened] (CTAKES-191) Update Apache OpenNLP dependency to 1.5.3 James Joseph Masanz (JIRA)
• [jira] [Updated] (CTAKES-355) Upgrade to UIMA 2.9 James Joseph Masanz (JIRA)
• [jira] [Assigned] (CTAKES-355) Upgrade to UIMA 2.9 James Joseph Masanz (JIRA)
• [jira] [Resolved] (CTAKES-355) Upgrade to UIMA 2.7.x James Joseph Masanz (JIRA)
• [jira] [Commented] (CTAKES-423) Remove redundant entries from pom.xml ASF subversion and git services (JIRA)
• [jira] [Created] (CTAKES-423) Remove redundant entries from pom.xml James Joseph Masanz (JIRA)
• [jira] [Commented] (CTAKES-191) Update Apache OpenNLP dependency to 1.5.3 ASF subversion and git services (JIRA)
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• [jira] [Commented] (CTAKES-355) Upgrade to UIMA 2.7.x ASF subversion and git services (JIRA)
• [jira] [Created] (CTAKES-422) Correct username and password but getting error Unknown host exception: uts-ws.nlm.nih.gov Vandana (JIRA)
• [jira] [Commented] (CTAKES-312) upgrade uimafit ASF subversion and git services (JIRA)
• [jira] [Reopened] (CTAKES-389) cTAKES dictionary lookup missed word starting string bug James Joseph Masanz (JIRA)
• [jira] [Updated] (CTAKES-389) cTAKES dictionary lookup missed word starting string bug James Joseph Masanz (JIRA)
  • [jira] [Updated] (CTAKES-389) cTAKES dictionary lookup missed word starting string bug James Joseph Masanz (JIRA)
• [jira] [Updated] (CTAKES-418) Exception: java.io.FileNotFoundException: ctakes-temporal/data/misc/{various} James Joseph Masanz (JIRA)

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