by default, macports installs tcl with the +corefoundation variant (see
http://guide.macports.org/#using.variants )
if you do:
sudo port install tcl -corefoundation
that will solve the problem.
-David
On Mon, May 6, 2013 at 8:26 PM, Rhitankar Pal <rhitan...@gmail.com> wrote:
> Dear Thomas,
>
> One more question. When I tried to install pymol using port [ sudo port
> install pymol ] I get the following error message:
>
> Error: org.macports.archivefetch for port pymol returned: tcl must be
> installed without +corefoundation.
>
> Do you have any idea why there is this error message?
>
> Eventually I downloaded the tar.gz and installed it using the setup.py
> inside. Which is apparently not compatible with the Pmw2 and therefore gave
> the error I mentioned in my previous email. Any help would be appreciated
>
> Thanks
> Rhitankar
>
>
>
>
>
> On Mon, May 6, 2013 at 8:20 PM, Rhitankar Pal <rhitan...@gmail.com> wrote:
>
>> Dear Thomas,
>>
>> Now I have installed Pmw.1.3 which should be the one compatible with
>> python2.7 I guess. However I am still getting the same error. I think pymol
>> is trying to use Pmw2 by default. Is there any way we can ask it to use 1.3
>> instead?
>>
>> Thanks for your help
>>
>> Rhitankar
>>
>>
>>
>> On Sat, May 4, 2013 at 6:21 AM, Thomas Holder <
>> thomas.hol...@schrodinger.com> wrote:
>>
>>> Hi Rhitankar,
>>>
>>> looks like you installed the python3 version of Pmw which is not
>>> compatible with python 2.7.
>>>
>>> Cheers,
>>> Thomas
>>>
>>> Rhitankar Pal wrote, On 05/03/13 21:16:
>>> > Dear Pymol developers,
>>> >
>>> > I have recently installed pymol 1.6.x in MAC OS X 10.8.2 and have the
>>> > following error while opening the GUI
>>> >
>>> > Traceback (most recent call last):
>>> > File "/Library/Python/2.7/site-packages/pmg_tk/__init__.py", line 35,
>>> > in run
>>> > PMGApp(pymol_instance,skin).run(poll)
>>> > File "/Library/Python/2.7/site-packages/pmg_tk/PMGApp.py", line 325,
>>> > in __init__
>>> > self.runSkin()
>>> > File "/Library/Python/2.7/site-packages/pmg_tk/PMGApp.py", line 251,
>>> > in runSkin
>>> > self.skin.setup()
>>> > File
>>> > "/Library/Python/2.7/site-packages/pmg_tk/skins/normal/__init__.py",
>>> > line 3661, in setup
>>> > self.createInterface()
>>> > File
>>> > "/Library/Python/2.7/site-packages/pmg_tk/skins/normal/__init__.py",
>>> > line 3634, in createInterface
>>> > self.balloon = Pmw.Balloon(self.root)
>>> > File
>>> > "/Library/Python/2.7/site-packages/Pmw/Pmw_2_0_0/lib/PmwBalloon.py",
>>> > line 28, in __init__
>>> > Pmw.MegaToplevel.__init__(self, parent)
>>> > File
>>> "/Library/Python/2.7/site-packages/Pmw/Pmw_2_0_0/lib/PmwBase.py",
>>> > line 982, in __init__
>>> > super().__init__(parent, tkinter.Toplevel)
>>> > TypeError: super() takes at least 1 argument (0 given)
>>> >
>>> > As a result it never opens the "The Pymol Molecular Graphics System"
>>> > window. Can anyone help to find out what might be wrong.
>>> >
>>> > Thanks
>>> > Rhitankar
>>> >
>>> > --
>>> > Rhitankar Pal
>>> > Postdoctoral Researcher,
>>> > Dept of Chemistry, Yale University
>>> > New Haven, CT 06511
>>>
>>> --
>>> Thomas Holder
>>> PyMOL Developer
>>> Schrödinger Contractor
>>>
>>>
>>> ------------------------------------------------------------------------------
>>> Get 100% visibility into Java/.NET code with AppDynamics Lite
>>> It's a free troubleshooting tool designed for production
>>> Get down to code-level detail for bottlenecks, with <2% overhead.
>>> Download for free and get started troubleshooting in minutes.
>>> http://p.sf.net/sfu/appdyn_d2d_ap2
>>> _______________________________________________
>>> PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
>>> Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
>>> Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
>>>
>>
>>
>>
>> --
>> Rhitankar Pal
>> Postdoctoral Researcher,
>> Dept of Chemistry, Yale University
>> New Haven, CT 06511
>>
>
>
>
> --
> Rhitankar Pal
> Postdoctoral Researcher,
> Dept of Chemistry, Yale University
> New Haven, CT 06511
>
>
> ------------------------------------------------------------------------------
> Learn Graph Databases - Download FREE O'Reilly Book
> "Graph Databases" is the definitive new guide to graph databases and
> their applications. This 200-page book is written by three acclaimed
> leaders in the field. The early access version is available now.
> Download your free book today! http://p.sf.net/sfu/neotech_d2d_may
> _______________________________________________
> PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
> Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
> Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
>
------------------------------------------------------------------------------
Learn Graph Databases - Download FREE O'Reilly Book
"Graph Databases" is the definitive new guide to graph databases and
their applications. This 200-page book is written by three acclaimed
leaders in the field. The early access version is available now.
Download your free book today! http://p.sf.net/sfu/neotech_d2d_may
_______________________________________________
PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net