Re: [Dspace-tech] Modifying values exposed via OAI unqualified DC

2009-01-21 Thread Stuart Lewis [sdl]
Hi Mark,

 Claudia,

Thanks for the pointer, but can you tell me where this file should
 be? I've done a find on my server and it's not coming up.

Mark

DSpace 1.5.x:

[dspace-src]/dspace-oai/dspace-oai-api/src/main/java/org/dspace/app/oai/OAID
CCrosswalk.java

DSpace 1.4.x and earlier:

[dspace-src]/src/org/dspace/app/oai/OAIDCCrosswalk.java

Thanks,


Stuart
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Re: [Dspace-tech] HANDLE update issue

2008-12-15 Thread Stuart Lewis [sdl]
Hi Tom,

 

Would you mind trying an experiment for us? If you remove the semicolon
from
[dsapce-src]/dspace-api/src/main/java/org/dspace/handle/UpdateHandlePref
ix.java run mvn package, and ant update, does the script
[dspace]/bin/update-hanmdle-prefix then run OK?

 

I suspect it will fix the problem.

 

If you could confirm this, we'll get it fixed ready for the next release
of DSpace.

 

Thanks,

 

 

Stuart

 

From: McGee, Thomas A. [mailto:thomas.mc...@shu.edu] 
Sent: 15 December 2008 14:56
To: dspace-tech@lists.sourceforge.net
Subject: [Dspace-tech] HANDLE update issue

 

Following up on my question of last week on the failed UPDATE queries
for changing handles on an Oracle database, this is what happened. 

 

Stuart Lewis suggested that the failing query was this: 

UPDATE metadatavalue SET text_value= (SELECT 'http://hdl.handle.net/' ||
handle FROM handle WHERE handle.resource_id=item_id AND

handle.resource_type_id=2) WHERE  text_value LIKE
'http://hdl.handle.net/% http://hdl.handle.net/%25 ';

 

When I ran that in the Oracle SQL Developer application, I got an error
something like no statement at cursor. I simply deleted the semicolon
and ran:

 

UPDATE metadatavalue SET text_value= (SELECT 'http://hdl.handle.net/' ||
handle FROM handle WHERE handle.resource_id=item_id AND

handle.resource_type_id=2) WHERE  text_value LIKE
'http://hdl.handle.net/% http://hdl.handle.net/%25 '

 

Which worked. Could that really be all that it is?

 

_

Tom McGee

Senior Digital Media Specialist

Seton Hall University

400 South Orange Ave., South Orange, NJ 07079

973.275.2992

 

 

 

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Re: [Dspace-tech] LDAP Authentication failure

2008-08-19 Thread Stuart Lewis [sdl]
Hi,

 We are using DSpace 1.4.2; We are facing this problem on a RHEL box.
 
 2008-08-12 15:33:33,847 INFO  org.dspace.eperson*.*PasswordAuthentication @
 anonymous:session_id=86F90023214655DE8C1AA34B81B2B2B5:ip_addr=10.10.3.205:auth
 enticate:attempting
 password auth of [EMAIL PROTECTED]
  2008-08-12 15:33:33,852 INFO
 org.dspace.app.webui.servlet.PasswordServlet @
 anonymous:session_id=86F90023214655DE8C1AA34B81B2B2B5:*ip_addr=10.10.3.205:fai
 led_login:[EMAIL PROTECTED],
 result=4*

The subject of your email suggests that you are wanting to use LDAP to
authenticate your users?

If this is the case it looks like you might not have set it up correctly as
DSpace is still trying to authenticate using its own in-built password
system.

To enable LDAP, do the following in [dspace]/config/dspace.cfg:

 - Set 'ldap.enable' to 'true'
 - Set LDAP as the authentication method:
   - plugin.sequence.org.dspace.eperson.AuthenticationMethod = \
org.dspace.eperson.LDAPAuthentication
 - Set all your LDAP parameters to your local server settings
 - Restart tomcat

 Also, *how to reflect new changes made to any Java file, before
 rebuilding the dspace.war*?

Re-run ant, as follows:

 - ant -D[dspace]/config/dspace.cfg update

Thanks,


Stuart
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Re: [Dspace-tech] DSpace 1.4.2 and LDAP

2008-05-22 Thread Stuart Lewis [sdl]
Hi Darryl,

 I have been trying for some time to wrap my head around how to get LDAP to
 work with DSpace 1.4.2.
 I find it strange because unlike everything else related to DSpace, LDAP is
 not extensively documented and I've seen so many different forums with varying
 views, problems and solutions. Is there anyone who can point me in the right
 direction? Any help would be greatly appreciated.

LDAP settings are always very unique to an institution, so it is hard to
provide very generic documentation and advice.

A few tips though:

 - Out of the box DSpace will only support a flat LDAP structure where are
users are in a single OU. If this is not the case, you'll have to try this
patch, until it becomes a part of core DSpace:
http://sourceforge.net/tracker/index.php?func=detailaid=1597831group_id=19
984atid=319984

 - Try using an LDAP browser (e.g.
http://www-unix.mcs.anl.gov/~gawor/ldap/download.html). Test your settings
in this, and once they work, enter them into the DSpace configuration. The
LDAP browser is a lot easier to use and diagnose connection problems with,
than directly in DSpace.

Thanks,


Stuart
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Re: [Dspace-tech] Tangent: *configuring* user statistics

2008-04-29 Thread Stuart Lewis [sdl]
Hi Mark,

 While we're talking about the bin/stat-* scripts:  they really
 shouldn't be configured in the scripts themselves; the file paths at
 least should be placed in config/dspace.cfg so they don't get blown
 away by code updates.  Shall I cook up a patch, or is someone else
 already working on that?
 
 While I'm at it, I might suggest making the start_year and start_month
 commandline parameters to stat-initial and stat-report-initial.

Some of this has already been done and is in 1.5. See the log for revision
2630 and 2680:

http://dspace.svn.sourceforge.net/viewvc/dspace?view=revrevision=2630
http://dspace.svn.sourceforge.net/viewvc/dspace?view=revrevision=2680

The start month and year are now stored in dstat.cfg rather than in each
script. The scripts have been replaced with Java classes, so that people
running DSpace on windows don't have to worry about installing Perl.

The values for the input and output directories are taken from dspace.cfg,
using the log.dir and report.dir properties.

Does that cover everything you wanted?

Cheers,


Stuart
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Re: [Dspace-tech] DSpace Remote APIs

2008-02-28 Thread Stuart Lewis [sdl]
Hi Robin,

The SWORD project team are hoping to extend SWORD to cover the full CRUD
functionality. APP, upon which SWORD is based, supports this
(http://bitworking.org/projects/atom/draft-ietf-atompub-protocol-09.html
#edit).

The SWORD project has now won further funding, and we will soon start to
investigate it, but our intention is to go along this route.

Thanks,


Stuart

-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Robin
Taylor
Sent: 28 February 2008 09:55
To: 'Mark Diggory'
Cc: dspace-tech@lists.sourceforge.net; [EMAIL PROTECTED]
Subject: Re: [Dspace-tech] DSpace Remote APIs

Hi Mark,

I did post it when it was originally written (Sourceforge patch 1619468)
although I don't have too much confidence in this early version, it has
been
made more robust since then but I never got round to updating the patch.
When it was written there wasn't much going on with regards to ingest
outwith the UI but things are changing. We would prefer to migrate to
something more inline with future development and have been looking at
Sword. Unfortunately we need the 'update' function and Sword only
appears to
provide 'add' at this point in time. If as hoped the central dspace api
becomes a fairly stable entity then it may be that a number of non-UI
interfaces emerge in the same way that there is now the JSP and XML UIs.
It
is an area that is of immediate interest to us so I hope we can
contribute
in some way.

Cheers, Robin.
 

 

-Original Message-
From: Mark Diggory [mailto:[EMAIL PROTECTED] 
Sent: 27 February 2008 19:52
To: [EMAIL PROTECTED]
Cc: 'Rob Hudson'; dspace-tech@lists.sourceforge.net
Subject: Re: [Dspace-tech] DSpace Remote APIs

Robin,

This is interesting... You should post it... Have you seen this patch?

https://sourceforge.net/tracker/index.php? 
func=detailaid=1898241group_id=19984atid=319984

It ends up using ItemExporter for a similar case...

My only problem with this (and I stated it in the referenced ticket) is
that
we are trying to get away from ItemImporter/ItemExporter or at least get
them in line with the Packager framework somehow...  
Right now theres are two completely different implementations used for
ingest and its getting unclear which the community should be more
focused
on.

Cheers,
Mark


On Feb 22, 2008, at 3:46 AM, Robin Taylor wrote:

 Hi Rob,

 We developed a set of web service interfaces based around the batch  
 importer
 and supporting the same functionality (add, delete, update) which  
 we do use
 for one of our installations to import items from an existing research
 database. This was very much a bespoke development but I would happily
 provide the code if you are interested.

 Cheers, Robin.


 -Original Message-
 From: [EMAIL PROTECTED]
 [mailto:[EMAIL PROTECTED] On Behalf Of Rob  
 Hudson
 Sent: 22 February 2008 10:30
 To: dspace-tech@lists.sourceforge.net
 Subject: [Dspace-tech] DSpace Remote APIs

 Hello all,

 I'm trying to find out more information about DSpace remote APIs.  
 I've found
 the following wiki page but the information on it seems out of date:
 http://wiki.dspace.org/index.php/NetworkInterfaces. I spoke to the  
 CARET
 team and they have stated that the LightWeightNetwork interface has  
 taken
 over the main line of development. How actively developed are these
 interfaces? Which are included in the core DSpace (and which are
 extensions)?

 I'm more than happy to update the wiki page if someone can give me  
 more
 information.

 Thanks for any responses

 Rob



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Re: [Dspace-tech] Illegal argument exception

2008-01-23 Thread Stuart Lewis [sdl]
Hi Jose,

 In the last few days I've been getting errors like this:
 
 -- URL Was: http://deepblue.lib.umich.edu/dspace/handle/2027.42/31692
 -- Method: GET
 -- Parameters were:
 
 Exception:
 java.lang.IllegalArgumentException: 2 Dec 2007 03:08:59 GMT
 at
 org.apache.catalina.connector.HttpRequestBase.getDateHeader(HttpRequestB
 ase.java:860)
 at 
 
 I looked at the logs file and I don't see anything out of the normal
 going on.  It looks like crawling from google.  When I try the URL, it
 works fine.  Any ideas what could be causing this?

My guess (and it is only a guess!) is that the date format being sent by the
crawler is incorrect, so Tomcat burps and spits it out.

It works for your browser as your browser is sending a valid date format.

What is being sent is: 2 Dec 2007 03:08:59 GMT

According to RFC 1123 Section 5.2.14, the date stamp is supposed to be
formatted to the RFC 822 date specification (Section 5) except for the use
of a 4 digit year.

So comparing the spec with what was sent, it looks likes it is upset because
there is no 'day' (e.g. Mon / Tue / Wed etc) component. It should perhaps
read: 

Sun 2 Dec 2007 03:08:59 GMT

But as I said, it is only a guess, and I might be way off the mark.

Cheers,


Stuart
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Re: [Dspace-tech] DSpace 1.5 - mvn package trouble

2008-01-14 Thread Stuart Lewis [sdl]
Hi Chad

 I upgraded to Java 1.5 and am getting the exact same results as before.
 
 Is there any more information I can find and provide in order to help track
 down the cause?

Could you run 'javac -version' just to confirm your system is picking up the
new 1.5, rather than the old 1.4 JDK?

I'm pretty sure it is this bit of the maven pom.xml throwing the error:

!-- 
Java 1.5 is our officially endorsed build target
platform.
 --
 plugin
artifactIdmaven-compiler-plugin/artifactId
configuration
   source1.5/source
   target1.5/target
/configuration
 /plugin

Cheers,



Stuart
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Re: [Dspace-tech] DSpace 1.5 - mvn package trouble

2008-01-12 Thread Stuart Lewis [sdl]
Hi Chad,

 I have been trying to build a DSpace 1.5 alpha from the svn repository by
 following the steps at
 http://wiki.dspace.org/index.php/Building_DSpace_From_Source
 However, I have been unsuccessful. On the step that says to type mvn package
 I get the build failure message below. I have java version 1.4.2_15.

 
 [ERROR] BUILD FAILURE
 [INFO] 
 
 [INFO] Compilation failure
 Failure executing javac, but could not parse the error:
 javac: invalid target release: 1.5

This error says that DSpace requires Java JDK version 1.5 or higher, and
because you are only running 1.4.2, it is not able to compile the code.

If you upgrade to Sun JDK 1.5 or higher, you should find it will compile OK.

Thanks,


Stuart
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Re: [Dspace-tech] Browse by Author and UTF-8

2008-01-11 Thread Stuart Lewis [sdl]
Hi Robin,

This is the exact fix as per the installation instructions:

http://www.dspace.org/index.php?option=com_contenttask=viewid=152

===
You also need to alter Tomcat's default configuration to support searching and 
browsing of multi-byte UTF-8 correctly. You need to add a configuration option 
to the Connector element in [tomcat]/config/server.xml:

URIEncoding=UTF-8e.g. if you're using the default Tomcat config, it should 
read:

!-- Define a non-SSL HTTP/1.1 Connector on port 8080 --Connector port=8080 
  maxThreads=150 minSpareThreads=25 maxSpareThreads=75   
enableLookups=false redirectPort=8443 acceptCount=100   
connectionTimeout=2 disableUploadTimeout=true   
URIEncoding=UTF-8 /
===

So you should be safe.

Cheers,


Stuart
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-Original Message-
From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Robin Taylor
Sent: 11 January 2008 15:45
To: dspace-tech@lists.sourceforge.net
Subject: [Dspace-tech] Browse by Author and UTF-8

Wonder if anyone can help. We have an author whose name contains an umlaut
König. The name displays fine in the list of authors but is displayed
incorrectly when the author is selected - König. The problem appears to
be that the name is passed as a parameter in an encoded URL and is not being
correctly decoded when it reaches the servlet (ItemsByAuthorServlet). I can
fix the problem by adding parameter  URIEncoding=UTF-8 to the correct
place in Tomcat's Server.xml file, but a global change like this leaves me a
bit nervous about what other unforseen effects this may have. This is
happening on Windows and Unix (Solaris), Dspace 1.3.2. I am sure someone
else must have encountered this problem, any advice would be greatly
appreciated.

Thanks, Robin.

 


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Re: [Dspace-tech] Watermarking images on-the-fly

2008-01-11 Thread Stuart Lewis [sdl]
Hi Shane,

 Have there been any projects investigating the potential for
 watermarking images stored in the repository as they are accessed by
 the user?
 
 Here is a quick guide to using PHP and the GD Graphics Library to
 accomplish this, but not within the DSpace environment:
 
 http://www.sitepoint.com/article/watermark-images-php
 
 I'm not sure if something like this could be done within DSpace, but
 it would certainly be helpful for my institution in some cases.

Does the branded image item facility do what you want?

In [dspace-src]/docs/configure.html, look for:

===
Displaying Image Item Preview

For particular types of objects (currently various image formats), a preview
feature can be activated. This provides a branded version of the DSpace
bitstream for display on the Item Display page.

To activate this feature and display a preview image on the item page (all
properties mentioned below are found in dspace.cfg):

 - Uncomment the lines defining the list of configured mediafilters at
plugin.sequence.org.dspace.app.mediafilter.MediaFilter to include
org.dspace.app.mediafilter.BrandedPreviewJPEGFilter.

 - Set the maximum pixel dimensions for the preview image by altering the
webui.preview.maxwidth and webui.preview.maxheight (default is 600) config
items.

 - Set the webui.preview.brand to the text you want to brand the image with.
The brand will appear as white text on a black background strip across the
base of the image. For example you might set the text to the owning
organisation. The handle is also displayed as part of the branding.

 - Set the webui.preview.brand.abbrev. This is an abbreviated form of the
webui.preview.brand text and will be shown where the brand text is longer
than the image width (e.g. for narrow images).

 - Set the webui.preview.brand.height to the height in pixels of the
appended branding (default 20).

 - Set the webui.preview.brand.font to the font for the brand text (default
is SansSerif).

 - Set the webui.preview.brand.fontpoint to the font size for the brand text
(default is 12).

 - Run [dspace]/bin/filter-media to generate the preview images. These will
be stored in a BRANDED_PREVIEW bundle so won't interfere with existing
bundles.

 - Set webui.preview.enabled = true.

 - Set webui.preview.dc if a metadata value is to appear just below the
preview. For example, to highlight item rights you might set
webui.preview.dc = rights or to show the description as part of the preview
set webui.preview.dc = description.abstract. This is disabled by default.

 - Restart Tomcat.
===

Thanks,


Stuart
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Re: [Dspace-tech] Dspace installation on Windows server 2003

2008-01-09 Thread Stuart Lewis [sdl]
Hi Paul,

 Has anyone done the Dspace installation on a Windows 2003 server, I did the
 steps as in the documentation everything goes fine until I ran the Ant Full
 Install, start installing stuff and as the war files is being installed the
 installation stops with this error initialize Database@ Caught exeption:
 Java.SQL.SQLexption: Java Lang.nullpoint.exeption.
  
 I checked thePsql settings the username is ok and password, the service is
 running.
  
 Does anyone have a Idea what causes this error

Could you send the whole output from the ant command so we can see what the
underlying cause of that exception might be?

We (amongst many others) run Dspace instances on Windows Server 2003, so we
should be able to get this sorted for you quite easily.

Thanks,


Stuart
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Re: [Dspace-tech] Eprints to Dspace migration

2007-12-20 Thread Stuart Lewis [sdl]
Hi Pavan,

 Has anybody tried with Eprints to Dspace migration. If Please can u
 send me the steps you followed to migrate . Currently i followed steps
 given in this 
 site(http://rubric.edu.au/techreports/tech_report-eprints_to_dspace.htm).
 But i wasn't able to successfully import , i got some 1000 directories
 created in my output directories which had dublin_core.xml files in
 it.
 I was not able to successfully ingest items. If anybody has
 successfully migrated , can u please list me the steps you followed.

It sounds promising that you are able to create the directories and files to
ingest, hopefully there is something wrong with the DSpace import command
you are using that we can help you with.

1) What command are you running to import the items?

2) What error message is DSpace giving you?

Thanks,


Stuart
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Re: [Dspace-tech] Dspace Documentations

2007-12-14 Thread Stuart Lewis [sdl]
Hi,

 Iam  newbie to Dspace and would like to try to install and configure for our
 Library.I have intermediate level of java programming.Please,can anyone help
 me to point out  tutorials and documentation for the beginners?.

A lot of the documentation is distributed with DSpace in the /docs
directory, and in the help html files.

There is a long list of useful resources on the wiki:

 - http://wiki.dspace.org/DspaceResources

If you have any further questions, please feel free to come back and ask! :)

Thanks,


Stuart
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Re: [Dspace-tech] handle resolution

2007-12-13 Thread Stuart Lewis [sdl]
Hi Kyle,

 Our dspace and handle server (kb.osu.edu) has been migrated to new hardware.
 It retains the same IP address and DNS name. Unfortunately after the IP switch
 our handle (1811) still resolves to the original machine. We have already
 changed the configuration settings in the main dspace config file. I believe
 that we have checked most of the other configuration files as well. Are there
 any other config files that anyone would suggest we take a look at? Has anyone
 run into a similar issue?

We have moved hardware too recently, and did the same as you - took the IP
address to the new machine.

I've had a look at your DSpace installation and it seems to be working now.

However, if you have trouble again in the future, you can always try out the
Handle System Proxy Server that will be running when you start the handle
system:

http://kb.osu.edu:8000/

This will help you interrogate your handle system. For example enter a valid
handle (1811/5859) and tick the 'Don't Redirect to URLs' box. You can then
see what the handle system thinks it should redirect to.
 
 Also a question about the handle system architecture... In our migration
 process, we planed to move the IP address from the old machine to the new one
 with the assumption that, in doing so, we would eliminate the need to make
 changes to the IP address we had on file with handle.net and the dns
 resolution of kb.osu.edu. Are handles resolved through IP address or domain
 name? I would think that IP would make more sense since the whole point of
 handles are to compensate for the possibility of non-stable domains names.

It is based on IP addresses for the reasons you describe.

Thanks,


Stuart
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Re: [Dspace-tech] Development goals (was: ETDs Dspace - BestPractices)

2007-11-13 Thread Stuart Lewis [sdl]
On 13/11/07 23:52, Christian Voelker [EMAIL PROTECTED] wrote:

 I appreciate your comment written with the deep knowledge of a
 long term user but I have a hard time to google all the external
 references to technologies such as Tapir, Researcher Pages, Sword
 an everything else you mention. I would need to know them to
 really understand where you are heading to. Can you gimme a link
 or a hint?

Tapir:
 - http://www.thesesalive.ac.uk/dsp_home.shtml
 - http://wiki.dspace.org/index.php/TapirAddOn

Researcher pages:
 - http://tinyurl.com/yveb2u
 - An example: http://tinyurl.com/yw6sk2

SWORD:
 - http://www.ukoln.ac.uk/repositories/digirep/index/SWORD
 - http://sourceforge.net/projects/sword-app/

I hope they help,


Stuart
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Re: [Dspace-tech] MS - IIS webserver

2007-11-07 Thread Stuart Lewis [sdl]
Hi John,

 Hello, I¹ve been looking for some information regarding the use of MS-IIS web
 server with Dspace but without much luck I¹m afraid.
 We are looking at the possibility of using Dspace and our IT department would
 like to know if we can use MS­IIS.
 If you are using it, would it be possible for you to tell me on which
 platform? Will it only run from a windows machine?

DSpace is a Java web application, so must be run through a Java Web
Application Server. The two most commonly used are Tomcat or Jetty.

IIS is not a Java web application server, so can not natively run DSpace.

Tomcat will run fine on Windows, so you can just use that if you want. A
large percentage run it on unix machines, but there are plenty who use
Windows.

If you want to run DSpace along with other applications (in IIS) on the same
server, this should be possible by running Tomcat and IIS together. You can
set up an ISAPI filter to forward certain paths (e.g. /dspace/) to Tomcat in
the same way that mod_jk works with Apache.

I hope this helps,


Stuart
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Re: [Dspace-tech] Blocking a malicious user

2007-11-01 Thread Stuart Lewis [sdl]
Hi Sue,

pg_hba.conf only controls who can communicate with Postgres, not who can
communicate with DSpace.

Normally it is only 'applications' (e.g. DSpace) that talk to Postgres,
not users.

A user talks to DSpace, who in turn talks to Postgres. Postgres has no
idea or interest in the IP address of the user who is using DSpace, only
that of the DSpace application.

Therefore adding malicious IP address into that config file will sadly
have no effect. You have to block users higher in the stack, either at
the application level (apache or tomcat directives), or at the network
level (firewall changes).

Thanks,


Stuart
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-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of
Thornton, Susan M. (LARC-B702)[NCI INFORMATION SYSTEMS]
Sent: 31 October 2007 17:51
To: Mika Stenberg; dspace-tech@lists.sourceforge.net
Subject: Re: [Dspace-tech] Blocking a malicious user

You can block ip addresses at the postgreSQL level in the pg_hba.conf
file.  Here is a person I blocked by ip address who was sending all
kinds of GET requests to our DSpace server:

hostall all malicious.ip255.255.255.255
reject

Sue Walker-Thornton
NASA Langley Research Center
ConITS Contract
757-224-4074
[EMAIL PROTECTED]

-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Mika
Stenberg
Sent: Wednesday, October 31, 2007 6:00 AM
To: dspace-tech@lists.sourceforge.net
Subject: Re: [Dspace-tech] Blocking a malicious user

We've had problems like that as well. Blocking specific IP's works only
for
a while since many bots and spammers seem to change their IP frequently.
We
didnt come up with a decent solution for this, but  blocking an entire
country of origin for a period of time has been on my mind. Managing the
allowed requests / timeslot for a specific IP might also do the trick.

-Mika


 If they're nasty enough, though, they'll drown your Apache or Tomcat
 server in replying with 403s. I've had times that I needed to be
 absolutely merciless and block at the firewall level, using iptables;
 then they don't even get as far as userspace.
 
 On Tue, 2007-10-30 at 14:01 -0500, Tim Donohue wrote:
  George,
  
  We had a similar problem to this one in the past (a year or so ago).
I
 
  just flat out blocked the IP altogether (not even specific to 
  /bitstream/) via this Apache configuration:
  
  Location /
   Order Allow,Deny
  
   Deny from {malicious ip}
  
   Allow from all
  /Location
  
  This looks similar to your config though (except it blocks all
access 
  from that IP).
  
  - Tim
  
  George Kozak wrote:
   Hi...
   
   I am having a problem with an IP that keeps sending thousands of
GET
 
   /bitstream/... requests for the same item.
   
   I have placed the following in my Apache.conf file:
   
   Directory /bitstream/
   Options Indexes FollowSymLinks MultiViews
   AllowOverride All
   Order allow,deny
   allow from all
   deny from {malicious ip}
   /Directory
   
   I also placed the following in my server.xml in Tomcat:
   Valve className=org.apache.catalina.valves.RemoteAddrValve 
   deny=xxx\.xxx\.xxx\.xx /
   
   However, this person still seems to be getting through.  My java 
   process is running from 50%-80% CPU usage.  Does anyone have a
good 
   idea on how to shutout a malicious IP in DSpace?
   
   ***
   George Kozak
   Coordinator
   Web Development and Management
   Digital Media Group
   501 Olin Library
   Cornell University
   607-255-8924
   ***
   [EMAIL PROTECTED] 
   
   
  


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Re: [Dspace-tech] LDAP administrator authentication

2007-10-25 Thread Stuart Lewis [sdl]
Hi Pete,

 I am using dspace 1.4.2 and I want to connect it with ldap server.
 The problem is that my ldap server needs userDN  password to make the
 connection.
 On the other hand, DSpace tries to authenticate users anonymously.
 I checked Dspace.org documentation but it has only an anonymous bind example.
 Any ideas about how I can make this work?

Normally LDAP works by using the netid and password of the user to bind to
the LDAP service. If this succeeds, then the password is assumed correct and
the user is logged in.

The problem arises when the userDN is not known in advance, if for example
different types of users are in different parts of the organisational
structure. In this case, trusted user credentials are required to first log
in, locate the correct userDN, and then reconnect to that using the user's
own credentials.

DSpace does not currently support that, but there is a patch that allows
this:

http://sourceforge.net/tracker/index.php?func=detailaid=1597831group_id=19
984atid=319984

Thanks,


Stuart
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Re: [Dspace-tech] Completed install but page cannot be displayed

2007-10-15 Thread Stuart Lewis [sdl]
Hi Peter,

Something to try to see if tomcat really is running:

What happens when you type:

telnet localhost 8080

If you get a message something like 'connection refused' then it sounds like
tomcat either isn't running, or is not listening on port 8080. Have you
looked at 'ps' to see if it is listed as a running process?

If the telnet command does work (you'll not see any output, just a blank
prompt) try typing:

GET / HTTP/1.0

And hit enter twice.

Hopefully this will return some HTML (the tomcat homepage). This would show
that tomcat is working.

If tomcat is working, it might be that your server is firewalled from your
computer running the browser. I don't know what a default Ubuntu firewall
config looks like, but assuming they give you one, it is possible (likely)
that a non-standard port such as 8080 is blocked by default, and you'll need
to unblock it.

Good luck!


Stuart
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On 15/10/07 23:33, Peter Urban [EMAIL PROTECTED] wrote:

 Thanks Christian.
 
 When I run http://ipaddress:8080, I get Internet Explorer cannot display
 the webpage. As best I can tell, Tomcat is running. I don't know much more
 about Tomcat to be able to troubleshoot further on my own. I get no errors
 when I start it using
 
 sudo /etc/init.d/tomcat5.5 start
 
 I installed Tomcat using Ubuntu's tomcat5.5 package. Initially, I had an
 error during installation
 
 * no JDK found - please set JAVA_HOME
 invoke-rc.d: initscript tomcat5.5, action start failed.
 dpkg: error processing tomcat5.5 (--configure):
  subprocess post-installation script returned error exit status 1
 Errors were encountered while processing:
  tomcat5.5
 E: Sub-process /usr/bin/dpkg returned an error code (1)
 
 Then, I realized that I had JRE (j2re1.4), not JDK, so I installed
 sun-java5-jdk package and reinstalled Tomcat. That seemed to work fine. I
 don't see a catalina.sh. I looked for it in /usr/local/tomcat, but I have no
 tomcat folder in local. Did I do the Tomcat installation wrong?
 
 On to your other questions...
 
 Yes ant-optional package is installed.
 
 When I copy the dspace*.war files to the webapps directory, they do not
 unpack. All I see are 2 war files, no dspace directory.
 
 Thanks for your help so far.
 
 -Peter
 
 
 
 -Original Message-
 From: Christian Voelker [mailto:[EMAIL PROTECTED]
 Sent: Monday, October 15, 2007 5:01 PM
 To: Peter Urban
 Cc: dspace-tech@lists.sourceforge.net
 Subject: Re: [Dspace-tech] Completed install but page cannot be displayed
 
 
 Am 15.10.2007 um 21:39 schrieb Peter Urban:
 
 when we launch a browser and try to access the site usinng http://
 ipaddress:8080/dspace, we get a 'page cannot be displayed' message.
 
 What do you get under http://ipaddress:8080 ?
 The Tomcat Homepage? So, is Tomcat actually running?
 If not, stick with this problem. Can you start it manually using
 catalina.sh? If this is not your issue, did you get any error msgs during
 your ant fresh-install? (ant-optional pkg is installed?).
 Does your automatic deployment work properly? So, if you drop your
 dspace.war into the webapps dir, does it get unpacked to a dspace subdir to
 the webapps dir? You are not yet at the point where the trouble with the
 database and the jdbc connector usually starts ;-) - no, sorry, I did not
 say that, I do not want you to shy away. There is really no reason to do so,
 just work through it step by step with getting tomcat up and running being
 the very first of them.
 
 Bye, Christian
 
 
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Re: [Dspace-tech] [Dspace-general] dspace email feature not working

2007-10-11 Thread Stuart Lewis [sdl]
Hi,

 I am using ubuntu 6.06 as operating system, the e mail feature is not working
 in my server the error in the log file is
 
 2007-10-11 11:55:11,915 INFO  org.dspace.app.webui.servlet.RegisterServlet @
 anonymous:session_id=7CBDA8042C27736FF48362A1D1056E8E:ip_addr=
 10.1.1.6:error_emailing:[EMAIL PROTECTED]
 javax.mail.MessagingException: Unknown SMTP host:
 http://mail.vidyaacademy.ac.in  http://mail.vidyaacademy.ac.in ;

It looks like you have set your mail server to be
'http://mail.vidyaacademy.ac.in' in your dspace.cfg file

It should probably just be mail.vidyaacademy.ac.in (remove the http://)

All you need is the DNS name of an SMTP server.

Thanks,


Stuart
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Re: [Dspace-tech] problem with itemimport in .bat file

2007-09-18 Thread Stuart Lewis [sdl]
Hi Wang,

In Windows batch scripts you need to prepend calls to other batch
scripts (dsrun is actually dsrun.bat) with 'call'.

So each line would read:

call dsrun org.dspace.app.itemimport.ItemImport -a -e etc...

I hope that helps,


Stuart
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From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of wang
jiahui
Sent: 18 September 2007 15:38
To: dspace-tech
Subject: [Dspace-tech] problem with itemimport in .bat file

Hi,

I wrote a .bat file to import items to collection. It's just composed of
individual item-import commands like this:

dsrun org.dspace.app.itemimport.ItemImport -a -e
[EMAIL PROTECTED] -c 17 -s I:\aaa\dmcu_data\A000\ACF0 -m ACF0
dsrun org.dspace.app.itemimport.ItemImport -a -e
[EMAIL PROTECTED] -c 18 -s I:\aaa\dmcu_data\A000\ACG0 -m ACG0 
dsrun org.dspace.app.itemimport.ItemImport -a -e
[EMAIL PROTECTED] -c 19 -s I:\aaa\dmcu_data\A000\ACH0 -m ACH0
dsrun org.dspace.app.itemimport.ItemImport -a -e
[EMAIL PROTECTED] -c 20 -s I:\aaa\dmcu_data\A000\ACI0 -m ACI0

But it returned after the first command run, leaving all the others not
run.
I'm sorry not familliar with .bat files, and I tried to google this
problem but 
got no answer.

Is there anyone knows what's wrong with this?

Thanks

Wang Jiahui 

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Re: [Dspace-tech] UTF-8 encoding in search mystery

2007-08-23 Thread Stuart Lewis [sdl]
Hi Steve,

 Can anyone help with this? I¹ve found that, since we moved from Solaris to
 Linux (RHEL), we are unable to search using words with non-ascii characters in
 them.
 
 E. g. the name ³Mühlhäusler² in simple search returns no results.

 The URL produced by the search is
 
 http://digital.library.adelaide.edu.au/dspace/simple-search?query=M%C3%83%C2%B
 Chlh%C3%83%C2%A4usler

 Can anyone offer advice on how to fix this? It is rather embarrassing not
 being able to search non-english words.

Looking at the headers from your server, it says the server is apache 2, so
I am guessing you are using mod_jk?

If so, have you got the following option set?

JkOptions +ForwardURIEscaped

If not, it will likely fix your problem.

Cheers,


Stuart
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Re: [Dspace-tech] Handle Configuration in DSPace 1.4.1/Windows 2003

2007-08-07 Thread Stuart Lewis [sdl]
Hi Jayan,

 (1)  In my repository all items except the single uploaded item (10220/62562)
 are having the default handler (123456789). How to run the
 update-handle-prefix script on Windows? Will this affect the handler service?

You might find it easier to first apply this patch:

http://sourceforge.net/tracker/index.php?func=detailaid=1642563group_id=19
984atid=319984

This uses Java rather than a Unix shell script to make the changes.

It should not affect the service at all - all it does is change the
identifiers in the database to use your new handle value.

(As always - test first on a backup!)
  
 (2) The protocol to be enabled for 2641 port is TCP or UDP?

UDP is better if you can.

Thanks,


Stuart
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Re: [Dspace-tech] Handle Configuration in DSPace 1.4.1/Windows 2003

2007-08-07 Thread Stuart Lewis [sdl]
Hi Jayan,

 For starting the handle server at the command prompt
 E:\DSpace\bindsrun -Dlog4j.configuration=log4j-handle-plugin.properties
 net.han
 dle.server.Main E:\dspace\handle-server
  
 In this case I need to leave the command line window open for the handle
 server to function. If I close the command line window, handle server stops.
 Is there a way to use ³javaw² to run the handle so that the process runs at
 the background. 

For a possible solution, take a look at:

http://cadair.aber.ac.uk/dspace/handle/2160/318

(See slides number 4  5)

Cheers,


Stuart
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Re: [Dspace-tech] Search result numbers

2007-08-07 Thread Stuart Lewis [sdl]
Hi Jayan,

 In the dspace repository after a search for a keyword, the log file (given
 below) returns ³results=(0,0,3)².  ³3² indicates the no of matches for the
 keyword. Please suggest regarding the other two digits (0,0,3) in the result.
  
 2007-08-08 11:57:30,506 INFO  org.dspace.search.DSQuery @ Final query string:
 mass communciation
 2007-08-08 11:57:30,617 INFO org.dspace.app.webui.servlet.SimpleSearchServlet
 @ 
 anonymous:session_id=7D5D46E1E11876318DDF688844913828:ip_addr=127.0.0.1:search
 :query=mass communciation,results=(0,0,3)

They refer to:

 1) The number of Community hits
 2) The number of Collection hits
 3) The number of Item hits

So if you tried the following query:

http://cadair.aber.ac.uk/dspace/simple-search?query=information

(As it stands at 8/8/2007)

You would get the numbers (2,4,131)

The code that produces the log line can be found on lines 291-294 of
org.dspace.ap.webui.servlet.SimpleSearchServlet:

// Log
   
log.info(LogManager.getHeader(context, search, logInfo + query=\

+ query + \,results=( + resultsCommunities.length + ,

+ resultsCollections.length + , + resultsItems.length + )));

Hope that helps,


Stuart
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Re: [Dspace-tech] Problem with new submission

2007-07-31 Thread Stuart Lewis [sdl]
Hi Daniel,

 When trying to make a new submission, after the first four steps (Describe,
 Describe, Describe, Upload) the Verify page shows almost all data as null
 values. Does somebody know how this can be possible or how can I solve it?

Is this happening on a fresh install of the software, or have you made any
modifications?

Thanks,


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Re: [Dspace-tech] i18n configurable multilingualism support

2007-07-25 Thread Stuart Lewis [sdl]
Hi Marcelo,

 Has anyone tried this patch:  SF Patch #1450491
 https://sourceforge.net/tracker/index.php?func=detailaid=1450491group_id=19
 984atid=319984  i18n configurable multilingualism support
 
 For what I've read, it seems to be an excellent addition to Dspace!!

It is indeed! It has recently been added to the core code and is available
from SVN trunk, and will be in version 1.5 which is scheduled to be released
later this year.

 In the meantime, i would like to have a simple dropdown list (or links) that
 allow a user to change the language. But i could not found any info on this,
 on the multilanguage-packs page.
 
 Is it made with javascript? Any ideas?

See the SourceForge patch:

 - [ 1759438 ] Multilingualism Language Switch - DSpace Header

It sounds like this is what you are requesting. A demo is online at
http://rspdspace.aber.ac.uk/dspace/

Thanks,


Stuart
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Re: [Dspace-tech] 1.4.2 installation problem

2007-07-11 Thread Stuart Lewis [sdl]
Hi Glen,

 After doing the preliminaries when I do ant fresh_install in the
dspace
 source directory I get the following error message:
 
 No supported regular expression matcher found

This usually means you have to install an extra package for ant which
contains the regular expression dependencies - often called something
like 'ant-optional' or 'ant-apache-regexp'.

Thanks,


Stuart
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Re: [Dspace-tech] input-forms.xml : including a url in the submissionsform

2007-07-11 Thread Stuart Lewis [sdl]
Hi,

 Has anyone succeeded in including a live link in the submissions form?  I can
 get the url to display as text, but it will not work as a link.  I know of one
 other person who has tried this and has had difficulty.

Do you mean in the 'hint' section?

If so, you can do it by using html codes. E.g.:

hintEnter the full bibliographic details of the item to be deposited, in
Harvard APA 5th edition format (guidance is available on the lt;a
href=http://www.port.ac.uk/departments/studentsupport/library/supportandadv
ice/Informationstudyskillssupportmaterial/harvardapaformat/
target=_newgt;Portsmouth University library sitelt;/agt;)/hint

Thanks,


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Re: [Dspace-tech] New users not seeing items in task pool

2007-06-07 Thread Stuart Lewis [sdl]
Hi Donna,

 If a new e-person is created after items have been submitted to the
 workflow, then the items don't display in their list of Tasks in the
 Pool. The older workflow items only display if they are accepted by
 another e-person and returned to the task pool.
 
 Does anybody know how to fix this problem?

As far as I know, this is a limitation in DSpace. If you have the resources,
you would be more than welcome to fix the issue and submit a patch, or you
could submit it as a feature request (
http://sourceforge.net/tracker/?group_id=19984atid=369984)

Thanks,


Stuart
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Re: [Dspace-tech] Validation and accents

2007-06-07 Thread Stuart Lewis [sdl]
Hi Luis,

 I have two problems.
 
 - I have a function to validate. I would like to know where do i have to put
 this function in the DSpace
 code. 
 Just for filtering the registrion for new users to people that does not
 belong to the university.
 
 boolean Función_Validar(String Usuario, String Clave)

You could have a look at the following patch which might do what you want:

http://sourceforge.net/tracker/index.php?func=detailaid=1642336group_id=19
984atid=319984

This patch has been included in the latest build of DSpace - 1.4.2.

It adds a new configuration option:

 PasswordAuthentication options 
# Only emails ending in the following domains are allowed to self-register
# Example - example.com domain : @example.com
# Example - MIT domain and all .ac.uk domains: @mit.edu, .ac.uk
# authentication.password.domain.valid = example.com

If you wanted to use your own version, your code would need to go inside:

org.dspace.eperson.PasswordAuthentication.canSelfRegister()

Thanks,


Stuart
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Re: [Dspace-tech] Fwd: Problem with Data Provider Validation

2007-06-06 Thread Stuart Lewis [sdl]
Hi Jodi / Keith,

 However this request returns error code=badArgument.
 http://dspace.udel.edu:8080/dspace-oai/request?verb=ListIdentifiers

The 'badArgument' occurs because you need to specify which format you want
the metadata in.

So the following works:

http://dspace.udel.edu:8080/dspace-oai/request?verb=ListIdentifiersmetadata
Prefix=oai_dc

However This still suffers from the problem of no records being returned
when no dates are specified.

As you have noticed, if you add a 'from' records are returned. (Not so if
you just add a 'to').

What should be happening, is OAICat passes a 'null' for 'to' and 'from' to
org.dspace.search.Harvest.java If it receives null values, it should not do
any date filtering on the select query. Something must be going wrong here.
To debug this, we need to see what queries are being run.

Can you:

1) Upgrade your logging output to DEBUG (change 'INFO' to 'DEBUG' in
[dspace]/conf/log4j.properties an then restart tomcat).

2) Watch you [dspace]/log/dspace.log file as you call the ListIdentifiers
URL which is returning an empty result set.

The debug output should show the output that OAICat is passing to
Harvest.java, and should show the corresponding query that Harvest.java
calls.

If you can send these to the list, we can look into the problem further.

Thanks,


Stuart
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Re: [Dspace-tech] dsrun data register trouble

2007-06-06 Thread Stuart Lewis [sdl]
Hi Horii,

 We have a memory problem and we can not register our repository data properly.
  If somebody knows anything about the similar problem, please let us know.
 The problem is as follows.
 During the data registration using dsrun utility, the memory resource is
  constantly consumed and finally the process stops because of the out of
  memory.It happens even if the data is only about several thousand.
 But our collection is up to hundred thousand or mor.
 We use Dspace Ver1.4.

Which dsrun script are you running? What is the full command you use?

Thanks,


Stuart
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Re: [Dspace-tech] Accented char in filename problem

2007-06-06 Thread Stuart Lewis [sdl]
Hi Mike,

On 1/6/07 14:04, Michael White [EMAIL PROTECTED] wrote:

 Hi,
  
 It has just been brought to my attention that an item in our repository that
 contains an accented character in the filename is not accessible in our
 repository because the char/url is being mangled when the link to the
 bitstream is clicked - http://dspace.stir.ac.uk/dspace/handle/1893/50.
  
 Does anyone have any suggestions as to the best way to fix this?
  
 I've had a few thoughts but also have concerns and definitely don't want to
 totally mangle my repository!!

 2) Add another copy of the bitstream to the item, without the accented char in
 the filename, using the Add Bitstream functionality and Remove the bitstream
 that has the dodgy title - not sure though if the Remove function will also
 fail because of the accented char(?)

To me, this seems the best option. The old file should delete cleanly as I
suspect (although haven't looked) that it uses its ID rather than its
filename to identify it in the delete request.

Thanks,


Stuart
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Re: [Dspace-tech] Fwd: Problem with Data Provider Validation

2007-06-06 Thread Stuart Lewis [sdl]
Hi Keith,

Any chance you could install this patch, and try again:

http://sourceforge.net/tracker/index.php?func=detailaid=1659868group_id=19
984atid=319984

The patch gives better database debugging, as it replaces the '?' in the log
file with the actual values given. We can then see the actual queries being
run, and you can try them by hand to see what is being returned.

Thanks,


Stuart
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On 6/6/07 20:20, Keith Jones [EMAIL PROTECTED] wrote:

 
 Thanks for the additional input.  I turned on debug and here is what
 output I am getting in the log file.
 
 2007-06-06 14:47:48,393 INFO  org.dspace.app.oai.DSpaceOAICatalog @
 anonymous:no
 _context:oai_request:verb=listIdentifiers,from=0001-01-01T00:00:00Z,until=
 -1
 2-31T23:59:59Z,set=null,metadataPrefix=oai_dc
 2007-06-06 14:47:49,008 DEBUG org.dspace.search.Harvest @
 anonymous::harvest SQL
 :SELECT handle.handle, handle.resource_id, item.withdrawn,
 item.last_modified FR
 OM handle, item WHERE handle.resource_type_id=2 AND
 handle.resource_id=item.item
 _id  AND item.last_modified = ?  AND item.last_modified = ?  ORDER BY
 handle.r
 esource_id
 2007-06-06 14:47:49,009 DEBUG org.dspace.storage.rdbms.DatabaseManager @
 Running
   query SELECT handle.handle, handle.resource_id, item.withdrawn,
 item.last_modi
 fied FROM handle, item WHERE handle.resource_type_id=2 AND
 handle.resource_id=it
 em.item_id  AND item.last_modified = ?  AND item.last_modified = ?
 ORDER BY h
 andle.resource_id
 2007-06-06 14:47:49,782 INFO  org.dspace.app.oai.DSpaceOAICatalog @
 anonymous:no
 _context:oai_error:no_items_match
 
 
 
 On Wed, 6 Jun 2007, Stuart Lewis [sdl] wrote:
 
 Hi Jodi / Keith,
 
 However this request returns error code=badArgument.
 http://dspace.udel.edu:8080/dspace-oai/request?verb=ListIdentifiers
 
 The 'badArgument' occurs because you need to specify which format you want
 the metadata in.
 
 So the following works:
 
 http://dspace.udel.edu:8080/dspace-oai/request?verb=ListIdentifiersmetadata
 Prefix=oai_dc
 
 However This still suffers from the problem of no records being returned
 when no dates are specified.
 
 As you have noticed, if you add a 'from' records are returned. (Not so if
 you just add a 'to').
 
 What should be happening, is OAICat passes a 'null' for 'to' and 'from' to
 org.dspace.search.Harvest.java If it receives null values, it should not do
 any date filtering on the select query. Something must be going wrong here.
 To debug this, we need to see what queries are being run.
 
 Can you:
 
 1) Upgrade your logging output to DEBUG (change 'INFO' to 'DEBUG' in
 [dspace]/conf/log4j.properties an then restart tomcat).
 
 2) Watch you [dspace]/log/dspace.log file as you call the ListIdentifiers
 URL which is returning an empty result set.
 
 The debug output should show the output that OAICat is passing to
 Harvest.java, and should show the corresponding query that Harvest.java
 calls.
 
 If you can send these to the list, we can look into the problem further.
 
 Thanks,
 
 
 Stuart
 _
 
 Datblygydd Cymwysiadau'r WeWeb Applications Developer
 Gwasanaethau Gwybodaeth  Information Services
 Prifysgol Cymru Aberystwyth   University of Wales Aberystwyth
 
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 Ffon / Tel: (01970) 622860
 _
 
 
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Re: [Dspace-tech] Servlet exception when sending mail

2007-06-06 Thread Stuart Lewis [sdl]
Hi Jason,

It sounds like tomcat might be suffering from a clash of jar files proving
email handling, and is using the GNU mail.jar rather than the one provided
with DSpace. Might be worth looking around and seeing if there is another
one sitting around which might be being used instead.

Thanks,


Stuart
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Prifysgol Cymru Aberystwyth   University of Wales Aberystwyth

E-bost / E-mail: [EMAIL PROTECTED]
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_



On 6/6/07 19:13, Jason Nugent [EMAIL PROTECTED] wrote:

 Hi folks,
 
 Something one of my users noticed today.  Our DSpace instance (latest
 version) is throwing an exception when ever a servlet tries to send
 mail.  In this case, the exception was generated when someone tried to
 reset a forgotten password, but it happens in all email cases.  My mail
 server is set to localhost, and I can send mail from the box just fine
 with the mail and sendmail commands.
 
 The full stack trace is:
 
 Jun 6, 2007 3:08:37 PM org.apache.catalina.core.StandardWrapperValve invoke
 SEVERE: Servlet.service() for servlet forgot threw exception
 java.lang.ClassCastException: gnu.mail.handler.TextPlain
  at 
 javax.activation.MailcapCommandMap.getDataContentHandler(MailcapCommandMap.jav
 a:596)
  at 
 javax.activation.MailcapCommandMap.createDataContentHandler(MailcapCommandMap.
 java:550)
  at 
 javax.activation.DataHandler.getDataContentHandler(DataHandler.java:611)
  at javax.activation.DataHandler.writeTo(DataHandler.java:315)
  at 
 javax.mail.internet.MimeUtility.getEncoding(MimeUtility.java:248)
  at 
 javax.mail.internet.MimeBodyPart.updateHeaders(MimeBodyPart.java:1268)
  at 
 javax.mail.internet.MimeMessage.updateHeaders(MimeMessage.java:2012)
  at 
 javax.mail.internet.MimeMessage.saveChanges(MimeMessage.java:1980)
  at javax.mail.Transport.send(Transport.java:97)
  at org.dspace.core.Email.send(Email.java:330)
  at 
 org.dspace.eperson.AccountManager.sendEmail(AccountManager.java:294)
  at 
 org.dspace.eperson.AccountManager.sendInfo(AccountManager.java:254)
  at 
 org.dspace.eperson.AccountManager.sendForgotPasswordInfo(AccountManager.java:1
 19)
  at 
 org.dspace.app.webui.servlet.RegisterServlet.processEnterEmail(RegisterServlet
 .java:406)
  at 
 
org.dspace.app.webui.servlet.RegisterServlet.doDSPost(RegisterServlet.java:209
)
  at 
 org.dspace.app.webui.servlet.DSpaceServlet.processRequest(DSpaceServlet.java:1
 47)
  at 
 org.dspace.app.webui.servlet.DSpaceServlet.doPost(DSpaceServlet.java:105)
  at javax.servlet.http.HttpServlet.service(HttpServlet.java:710)
  at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
  at 
 org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFi
 lterChain.java:269)
  at 
 org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChai
 n.java:188)
  at 
 org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java
 :210)
  at 
 org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java
 :174)
  at 
 org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
  at 
 org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:117)
  at 
 org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:1
 08)
  at 
 org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:151)
  at 
 org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:870)
  at 
 org.apache.coyote.http11.Http11BaseProtocol$Http11ConnectionHandler.processCon
 nection(Http11BaseProtocol.java:665)
  at 
 org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:
 528)
  at 
 org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWork
 erThread.java:81)
 
 Ideas appreciated.
 
 Thanks,
 Jason


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Re: [Dspace-tech] Problem with Data Provider Validation

2007-05-29 Thread Stuart Lewis [sdl]
Hi Keith,

Can we see the repository, to see what errors it gives us?

Thanks,


Stuart
_

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On 29/5/07 16:20, Keith Jones [EMAIL PROTECTED] wrote:

 
 Hi Claudia,
 
 Yes,
 
 I used both sites and both are reporting and error in the XML returned.
 
 The VlaidateSite failed on the return of the ?verb=Identify call.
 
 And the explorer site returned and error for all the test.
 
 
 
 On Tue, 29 May 2007, Claudia Jürgen wrote:
 
 Hi Keith,
 
 did you use the OAI Validation tool:
 http://www.openarchives.org/Register/ValidateSite
 
 or the repository explorer http://re.cs.uct.ac.za/ ?
 
 Claudia
 
 
 Keith Jones schrieb:
 Hello,
 
We are running DSpace version 1.4.1, and we want to register our
 repository as a OAI data provider.  I went to register but am unable to
 because of the following error:
 
 Malformed response: mismatched tag at line 11, column 62, byte 1114
 
 We are sending back malformed XML when requests are being made.
 
 Any help with this would be appreciated.
 
 Thanks
 Keith
 
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Re: [Dspace-tech] Problem with Data Provider Validation

2007-05-29 Thread Stuart Lewis [sdl]
Hi Keith,

 Thanks for the help. Currently my initial problem originated because I did
 not specify the correct base url.  Since correcting that problem the
 repository is not pass the ListIdentifiers test.
 
 The base url is:
 http://dspace.udel.edu:8080/dspace-oai/request

Weird!

http://dspace.udel.edu:8080/dspace-oai/request?verb=ListIdentifiersmetadata
Prefix=oai_dc

suggests that you have no records, but your repository has plenty!

It is talking to your database OK:

http://dspace.udel.edu:8080/dspace-oai/request?verb=ListSets

Do your log files ([dspace]/log/) show anything? If you turn logging up to
DEBUG, they might show something, and will show the calls being made to the
database.

Thanks,


Stuart
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Re: [Dspace-tech] Out of Memory error

2007-05-16 Thread Stuart Lewis [sdl]

On 16/5/07 19:56, Jeffrey Trimble [EMAIL PROTECTED] wrote:

 I've got this error all of a sudden:
 
 java.lang.OutOfMemoryError
 
 What caused this?

What were you doing when the error occurred? Was it from Tomcat and the web
application, or (more likely) from a command line tool?

Thanks,


Stuart
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Re: [Dspace-tech] [Dspace-general] How enable full-text searching.(Newbie)

2007-04-25 Thread Stuart Lewis [sdl]
Hi Anny,

 Does it mean i have to run bin/filter-media manually every time when I add a
 pdf  file? 

People tend to run this periodically, for example once a night. This can be
enabled via a cron job or scheduled task (unix or windows). See:

http://www.dspace.org/technology/system-docs/install.html#advancedinstall
 
 Is it possible by altering the Media Filter plugins (through PluginManager) in
 the dspace.cfg file?

Those settings are used to enable or disable different filters. For example,
you might decide that you want to enable full text searching of PDF files,
but not MS Word documents, in which case you can edit the settings. Or, you
might decide to write a filter to extract text from a different file format,
and you can add that there.

Thanks,


Stuart

P.S. - I have copied this to the dspace-tech (
https://lists.sourceforge.net/lists/listinfo/dspace-tech) email list as it
is probably better suited there
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Re: [Dspace-tech] [Dspace-general] How enable full-textsearching.(Newbie)

2007-04-25 Thread Stuart Lewis [sdl]
Hi Anny,

 Why not execute the mediafilter (such as creating index for the pdf
 file, creating thumbnail and so on) immediately once add a new item?I feel it
 will be better.

This would have to happen in a separate thread to the main web response so
as to not delay the web interface if a large file was uploaded.

With the proposed new messaging system that will be making it's way into a
future DSpace release, this sort of thing might be easier as it can pass
messages to other parts of DSpace (such as the media-filter, browse indexer
etc) to notify them about new jobs to do.

Thanks,


Stuart
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Re: [Dspace-tech] ldap dspace

2007-04-18 Thread Stuart Lewis [sdl]
Hi Susan,

 I started receiving the following messages in my dspace log today:
 
 2007-04-17 15:29:25,244 WARN  org.dspace.app.webui.servlet.LDAPServlet @
 anonymous:session_id=7EFF45148568493C0EB81D2E82FDCF62:ip_addr=128.172.144.44:l
 dap_authentication:type=failed_auth
 javax.naming.AuthenticationException: [LDAP: error code 49 - NDS error:
 failed authentication (-669)]

I'm guessing you are authenticating against Novell? The standard LDAP error
code 49, and Novell's error code -669 just mean bad username or password,
so aren't very helpful.

One little tool that is very useful in debugging LDAP problems is the 'LDAP
Browser'.

http://www-unix.mcs.anl.gov/~gawor/ldap/

You can give this the same information that you used to configure LDAP in
DSpace, and see if it lets you in. If it does, the problem will be with
DSpace (although you say you have changed anything so hopefully it is fine),
or if it doesn't, the problem will be with the LDAP service.

If it does also fail, it gives you a nice tool to take to the LDAP
administrators to show that connections are not working. They should be able
to turn on tracing to watch authentication attempts to their LDAP service to
see what is happening.

Good luck!


Stuart
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Re: [Dspace-tech] DSpace Statistics general report

2007-04-13 Thread Stuart Lewis [sdl]
Hi Gary,

 So can you tell me how the ³Most recent general report² is generated? Are the
 numbers compiled from the dspace-log-general-%DATE%.dat files or the
 dspace-log-monthly-%DATE%.dat files? (Or some other way?)
  
 I take it the ³stat-report-general² generates this report?

Running stat-general creates to relevant .dat file. Running
stat-report-general renders this file into the HTML page you see.

I've had a look at the code, and it appears that running stat-general uses
the .log files, rather than the .dat files to do the analysis. Therefore if
your log files are reaching the limit set in log4j.properties (500) and are
rolling over, then stat-general will be losing data.

So, in a nutshell, the general reports are compiled from the raw .log files.

Have you got backups of the old log files which you can restore (and
renumber), and then increase the log4j.appender.A1.MaxBackupIndex to make
sure you don't lose them again?

Hope this helps,


Stuart
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Re: [Dspace-tech] customize the interface?

2007-04-13 Thread Stuart Lewis [sdl]
Hi Pan,

 I'd like to customize DSpace by replacing the texts
 DSpace TM  About DSpace Software on the upper
 left and DSpace Software Copyright ... down below
 by the texts describing my institution and my project.
 Could someone please show me where in the html/java
 code under which directories that I can make these
 changes?

These values are held in
[dspace-src]/config/language-packs/Messages.properties

So you can change values such as:

jsp.layout.footer-default.text = a target=_blank
href=http://www.dspace.org/;DSpace Software/a
Copyrightnbsp;copy;nbsp;2002-2006nbsp;a target=_blank
href=http://web.mit.edu/;MIT/anbsp;andnbsp;a target=_blank
href=http://www.hp.com/;Hewlett-Packard/a


jsp.layout.footer-default.feedback = Feedback

Once you have changed this file, you will need to recompile and redeploy
DSpace.

I hope this helps,


Stuart
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Re: [Dspace-tech] Migration (1.3x to 1.4x) questions

2007-04-13 Thread Stuart Lewis [sdl]
Hi Russell,

 First of all, should we go from our current install (1.3.2, I think) to 1.4
 or 1.4.1?

You would be best off going for 1.4.1 as this contains a lot of bug fixes to
1.4

You do not need to go 1.3.2 - 1.4 - 1.4.1, you can go straight to 1.4.1
 
 Next, how much time should I allow for the migration (assuming everything
 goes smoothly)?

It depends on the size of your database, and the availability of a test
machine.

In theory, on a medium-sized database such as yours (only a few thousand
items), it should take less than an hour. If you have a test machine, you
can test it all first, and then do it on your production machine.

You can get the code on the machine and compiled in advance. All you then
have to do is to stop tomcat, backup your database, run the database upgrade
scripts, update your dspace.cfg file, and deploy the new DSpace code to
tomcat. If things mess up (which they shouldn't!) then you have a backup of
your database which you can restore, and roll back to 1.3.2

The tricky part will be if you have any customisations to the code or to the
pages. If you have a test machine, you can test these in 1.4.1, but if you
don't you'll have to give yourself more time to test them once you upgrade.

If you don't have a test machine, another option you have is to run the two
versions simultaneously by changing the names of the war files (e.g.
dspace141 and dspace-oai141 and pointing them at a second copy of your
database. You can then make sure you are happy with 1.4.1 whilst still
running 1.3.2, and then change over one day by upgrading the 1.3.2 live
database and changing the war file names back.

I hope this helps,


Stuart
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Re: [Dspace-tech] dc.contributor.advisor and dc.contributor.author looks like all of them are authors

2007-04-12 Thread Stuart Lewis [sdl]
Hi Tonny.

You should be able to change this by editing [dspace]/config/dspace.cfg
and restarting tomcat Look for the following section:

# Customise the DC metadata fields to show in the default simple item
view.
# 
# The form is schema prefix.element[.qualifier|.*][(date)|(link)],
...
#
# For example:
#dc.title   = Dublin Core element 'title' (unqualified)
#dc.title.alternative   = DC element 'title', qualifier
'alternative'
#dc.title.* = All fields with Dublin Core element
'title' 
# (any or no qualifier)
#dc.identifier.uri(link) = DC identifier.uri, render as a link
#dc.date.issued(date)   = DC date.issued, render as a date
#
# If an item has no value for a particular field, it won't be displayed.
# The name of the field for display will be drawn from the current UI
# dictionary, using the key:
#
# metadata.field
#
# e.g.   metadata.dc.title
#metadata.dc.contributor.* 
#metadata.dc.date.issued
#
#webui.itemdisplay.default = dc.title, dc.title.alternative,
dc.contributor.*, \
#dc.subject, dc.date.issued(date),
dc.publisher, \
#dc.identifier.citation,
dc.relation.ispartofseries, \
#dc.description.abstract, dc.description, \
#dc.identifier.govdoc,
dc.identifier.uri(link), \
#dc.identifier.isbn, dc.identifier.issn, \
#dc.identifier.ismn, dc.identifier

By default, dc.contributor.* metadata values are bunched together, you
need to separate them out.

I hope this helps,


Stuart
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-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Tonny H.
Laursen
Sent: 12 April 2007 09:08
To: [EMAIL PROTECTED]
Subject: [Dspace-tech] dc.contributor.advisor and dc.contributor.author
looks like all of them are authors

Hi,

If you look at this page: http://rudar.ruc.dk/handle/1800/2366
You will see eight authors, but actually one of them are an advisor -
you can see the metadata it if you click on show full item I want the
page to show seven authors and one advisor.

is this a bug or do i have to change something in the code for DSpace?

Thanks,
Tonny



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Re: [Dspace-tech] DSpace OAI-PMH

2007-04-12 Thread Stuart Lewis [sdl]
Hi Jayan,

 Any instructions are there on the web for using DSpace OAI-PMH. Please suggest
 how to set it up?

Normally there is no setting up required. All you have to do is to make sure
that you copy dspace-oai.war to your [tomcat]/webapps/ directory as well as
dspace.war

To test it, try:

http://dspace.example.com/dspace-oai/request?verb=Identify

You can try it out online using something like the repository explorer:
http://re.cs.uct.ac.za/

For DSpace your 'base URL' is http://dspace.example.com/dspace-oai/request

I hope this helps,


Stuart
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Re: [Dspace-tech] 2 Tier Dspace Implementation

2007-03-26 Thread Stuart Lewis [sdl]
Hi Jayan.
 
Take a look at the line that says:
 
[java] org.postgresql.util.PSQLException: Connection refused. Check that
the hostname and port are correct and that the postmaster is accepting
TCP/IP connections.

To do this:

1) Check that postmaster is accepting incoming connections on the
correct port. You can test this by using 'telnet
dspace.student.main.ntu.edu.sg:5432' and seeing if you get a response.
 
2) Take a look at [postgres]/data/pg_hba.conf to make sure that you have
allowed connections for the dspace user to postgres from dspaceweb1.
That file contains comments about how to configure access.
 
Hope this helps,
 
 
Stuart
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From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Jayan
Chirayath Kurian
Sent: 26 March 2007 10:00
To: Stuart Lewis [sdl]
Cc: dspace-tech@lists.sourceforge.net
Subject: [Dspace-tech] 2 Tier Dspace Implementation



Hi! Stuart,

 

(1) Postgresql 8.2.1-1 was installed on the DB server,
dspace.student.main.ntu.edu.sg. 

(2) JDK 1.6.0 and Tomact 6.0 was installed on the Client
dspaceweb1.student.main.ntu.edu.sg

(3) Dspace 1.4.1 was extracted to the client dspaceweb1.

a.   The postgresql-8.2-504.jdbc2.jar  file was copied from the DB
server to the client's lib folder

b.In the client, DSpace config file is modified as db.url =
jdbc:postgresql://dspace.student.main.ntu.edu.sg:5432/dspace

c.The JDBC Driver (db.driver = org.postgresql.Driver) and Database
username and password (db.username = dspace, db.password = dspace) was
not modified.

 

While giving ant fresh_install from the client dspaceweb1 (Dspace
source), database connectivity error from the server is given and build
is unsuccessful. I pinged from the client to the server which is fine. 

 

Please suggest where I have gone wrong. The error list is given below.

 

Thanks,

Jayan

 

 

 

Database connectivity error:-

 

Buildfile: build.xml

 

compile:

 

install_code:

 

build_wars:

 

init_configs:

 

setup_database:

 [java] 2007-03-26 16:35:24,862 INFO
org.dspace.storage.rdbms.InitializeDatabase @ Initializing Database

 [java] 2007-03-26 16:35:24,878 INFO
org.dspace.core.ConfigurationManager @ DSpace logging installed using
log4j.properties

 [java] 2007-03-26 16:35:27,018 FATAL
org.dspace.storage.rdbms.InitializeDatabase @ Caught exception:

 [java] org.postgresql.util.PSQLException: Connection refused. Check
that the hostname and port are correct and that the postmaster is
accepting TCP/IP connections.

 [java] Exception: java.net.ConnectException: Connection refused:
connect

 [java] Stack Trace:

 [java] java.net.ConnectException: Connection refused: connect

 [java]at java.net.PlainSocketImpl.socketConnect(Native
Method)

 [java]at
java.net.PlainSocketImpl.doConnect(PlainSocketImpl.java:333)

 [java]at
java.net.PlainSocketImpl.connectToAddress(PlainSocketImpl.java:195)

 [java]at
java.net.PlainSocketImpl.connect(PlainSocketImpl.java:182)

 [java]at
java.net.SocksSocketImpl.connect(SocksSocketImpl.java:366)

 [java]at java.net.Socket.connect(Socket.java:519)

 [java]at java.net.Socket.connect(Socket.java:469)

 [java]at java.net.Socket.init(Socket.java:366)

 [java]at java.net.Socket.init(Socket.java:179)

 [java]at
org.postgresql.core.PGStream.init(PGStream.java:59)

 [java]at
org.postgresql.core.v3.ConnectionFactoryImpl.openConnectionImpl(Connecti
onFactoryImpl.java:77)

 [java]at
org.postgresql.core.ConnectionFactory.openConnection(ConnectionFactory.j
ava:66)

 [java]at
org.postgresql.jdbc2.AbstractJdbc2Connection.init(AbstractJdbc2Connect
ion.java:125)

 [java]at
org.postgresql.jdbc2.Jdbc2Connection.init(Jdbc2Connection.java:24)

 [java]at
org.postgresql.Driver.makeConnection(Driver.java:382)

 [java]at org.postgresql.Driver.connect(Driver.java:260)

 [java]at
java.sql.DriverManager.getConnection(DriverManager.java:582)

 [java]at
java.sql.DriverManager.getConnection(DriverManager.java:185)

 [java]at
org.apache.commons.dbcp.DriverManagerConnectionFactory.createConnection(
DriverManagerConnectionFactory.java:48)

 [java]at
org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableCon
nectionFactory.java:290)

 [java

Re: [Dspace-tech] styles.css.jsp

2007-03-19 Thread Stuart Lewis [sdl]
Hi Susan,

You should be able to edit styles.css.jsp 'live'. You can edit it in:

[tomcat]/dspace/styles.css.jsp

JSPs usually automatically compile whenever they are changed, you don't need
to worry about editing them in [dspace-src] and then recompiling and
redeploying DSpace.

The only caveat is to remember to copy your final version back into
[dspace-src] so you don't loose your changes.

Hope this helps,


Stuart

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On 19/3/07 17:11, Susan Teague Rector [EMAIL PROTECTED] wrote:

 Has anyone else removed their css styles from a .jsp file yet? I'm
 getting ready to do this (I don't like having to recompile each time I
 change a style) and wanted to see if there were any gotchas.
 
 Is there a central location that I change the path from .jsp to .css?
 
 Thanks in advance!
 


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Re: [Dspace-tech] styles.css.jsp

2007-03-19 Thread Stuart Lewis [sdl]
Hi Susan,

...but to answer your first question, edit:

[dspace-src]/jsp/layout/header-default.jsp (about line 72)

Thanks,


Stuart

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On 19/3/07 21:18, Stuart Lewis [sdl] [EMAIL PROTECTED] wrote:

 Hi Susan,
 
 You should be able to edit styles.css.jsp 'live'. You can edit it in:
 
 [tomcat]/dspace/styles.css.jsp
 
 JSPs usually automatically compile whenever they are changed, you don't need
 to worry about editing them in [dspace-src] and then recompiling and
 redeploying DSpace.
 
 The only caveat is to remember to copy your final version back into
 [dspace-src] so you don't loose your changes.
 
 Hope this helps,
 
 
 Stuart
 
 _
 
 Datblygydd Cymwysiadau'r WeWeb Applications Developer
 Gwasanaethau Gwybodaeth  Information Services
 Prifysgol Cymru Aberystwyth   University of Wales Aberystwyth
 
 E-bost / E-mail: [EMAIL PROTECTED]
  Ffon / Tel: (01970) 622860
 _
 
 
 
 On 19/3/07 17:11, Susan Teague Rector [EMAIL PROTECTED] wrote:
 
 Has anyone else removed their css styles from a .jsp file yet? I'm
 getting ready to do this (I don't like having to recompile each time I
 change a style) and wanted to see if there were any gotchas.
 
 Is there a central location that I change the path from .jsp to .css?
 
 Thanks in advance!
 
 
 
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Re: [Dspace-tech] OAI-PMH and Oracle

2007-03-14 Thread Stuart Lewis [sdl]
Hi Rafa,

AbstractCatalog.granularity is used by the OAICAT toolkit which we use to 
generate the OAI-PMH responses. However it seems that it only affects the 
granularity-MM-DD/granularity in the Identify response. It does not 
affect the datestamps in other verb responses.

The way I read it, the spec does not specify whether if you set the granularity 
to YYY-MM-DD all responses must be in to the same granularity. So it seems that 
either oaicat is wrong, OAIster is wrong, or the spec does not specify, in 
which case we are all right! :)

I have sent an email to the OAI-implementers list to get some guidance.

In the mean time, I'm afraid I've not got access to Oracle at present so I 
can't look into the ORA-01858 error.

Thanks,


Stuart
_

Datblygydd Cymwysiadau'r WeWeb Applications Developer
Gwasanaethau Gwybodaeth  Information Services
Prifysgol Cymru Aberystwyth   University of Wales Aberystwyth

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 Ffon / Tel: (01970) 622860
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-Original Message-
From: Rafa [mailto:[EMAIL PROTECTED] 
Sent: 13 March 2007 13:08
To: Stuart Lewis [sdl]
Cc: dspace-tech@lists.sourceforge.net
Subject: Re: [Dspace-tech] OAI-PMH and Oracle

Hi,

Unfortunately, it doesn´t work for me. Seems that it has no effect since I get 
the same ORA-01858 error. The strange thing is that the harvesting works well 
when I set the granularity of the system from -MM-DDTHH:MM:SSZ to 
-MM-DD. It seems that the problem is in the time part of the timestamp. 
What's the connection between the property AbstractCatalog.granularity 
(oaicat.properties file) and this error? 
I've been looking into the code in Harvest.java and other files, but I can´t 
see the exact place where is this property read.

Thanks,

Rafa





Stuart Lewis [sdl] escribió:
 Hi Rafa,

 A patch has just been uploaded by Michael Judd which might solve your 
 problem, could you give it a go?

 https://sourceforge.net/tracker/?func=detailatid=319984aid=1678708g
 roup_id=19984

 Thanks,


 Stuart
 _

 Datblygydd Cymwysiadau'r WeWeb Applications Developer
 Gwasanaethau Gwybodaeth  Information Services
 Prifysgol Cymru Aberystwyth   University of Wales Aberystwyth

 E-bost / E-mail: [EMAIL PROTECTED]
  Ffon / Tel: (01970) 622860
 _
   

 -Original Message-
 From: [EMAIL PROTECTED] 
 [mailto:[EMAIL PROTECTED] On Behalf Of Rafa
 Sent: 12 March 2007 08:38
 To: dspace-tech@lists.sourceforge.net
 Subject: Re: [Dspace-tech] DSpace-tech Digest, Vol 11, Issue 28

 Hi,

 Dspace 1.4.1.

 Thanks


 [EMAIL PROTECTED] escribió:
   
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  dspace-tech@lists.sourceforge.net

 To subscribe or unsubscribe via the World Wide Web, visit
  https://lists.sourceforge.net/lists/listinfo/dspace-tech
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 When replying, please edit your Subject line so it is more specific 
 than Re: Contents of DSpace-tech digest...


 Today's Topics:

1. Re: OAI-PMH and Oracle (Stuart Lewis [sdl])


 -
 -

 Message: 1
 Date: Sat, 10 Mar 2007 21:16:51 +
 From: Stuart Lewis [sdl] [EMAIL PROTECTED]
 Subject: Re: [Dspace-tech] OAI-PMH and Oracle
 To: Rafa [EMAIL PROTECTED],dspace-tech@lists.sourceforge.net
 Message-ID: [EMAIL PROTECTED]
 Content-Type: text/plain;charset=ISO-8859-1

 Hi Rafa,

 Which version of DSpace do you use? The reason I ask is that the code 
 which generates the relevant SQL query for your OAI-PMH request 
 changed dramatically between 1.3.* and 1.4, and I don't know what 
 tests were run on the 1.4 version (there was a small bug which 
 slipped through with the postgres version of date handling in OAI-PMH 
 which got fixed in 1.4.1, so a similar small bug may have slipped through 
 the net with Oracle).

 If you can tell me, then we can look into finding the problem. My 
 guess would be the method in Harvest.java which converts datestamps for the 
 SQL.

 Thanks,


 Stuart
 _

 Datblygydd Cymwysiadau'r WeWeb Applications Developer
 Gwasanaethau Gwybodaeth  Information Services
 Prifysgol Cymru Aberystwyth   University of Wales Aberystwyth

 E-bost / E-mail: [EMAIL PROTECTED]
  Ffon / Tel: (01970) 622860 
 _

 On 6/3/07 08:29, Rafa [EMAIL PROTECTED] wrote

Re: [Dspace-tech] Fwd: how to restore database?

2007-03-14 Thread Stuart Lewis [sdl]
Hi Rudra,
 
The restore procedure will depend on which method you used to backup the
data. How did you back it up?

Postgres documentation about this can be found at:

http://www.postgresql.org/docs/8.1/static/backup.html (8.1)
http://www.postgresql.org/docs/8.0/static/backup.html (8.0)
http://www.postgresql.org/docs/7.4/static/backup.html (7.4)

(Choose an appropriate version according to your version of postgres)

Thanks,


Stuart
_

Datblygydd Cymwysiadau'r WeWeb Applications Developer
Gwasanaethau Gwybodaeth  Information Services
Prifysgol Cymru Aberystwyth   University of Wales Aberystwyth

E-bost / E-mail: [EMAIL PROTECTED]
 Ffon / Tel: (01970) 622860
_
  

-- Forwarded message --
From: rudra chandana [EMAIL PROTECTED]
Date: Mar 12, 2007 4:02 PM 
Subject: how to restore database?
To: dspace-tech@lists.sourceforge.net


I ve installed dspace1.3.2 on server(CENT os).It is working fine.But my
problem is already i hve databse of our institution which i previously
backed up and stored . now i need to restore into my dspace databse .How
do i do it.Please let me know the procedure , how to restore the
previous databse to the new one.
 
I ve done some stuff but it did not work.
using pg_restore command.

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Re: [Dspace-tech] OAI-PMH and Oracle

2007-03-12 Thread Stuart Lewis [sdl]
Hi Rafa,

A patch has just been uploaded by Michael Judd which might solve your problem, 
could you give it a go?

https://sourceforge.net/tracker/?func=detailatid=319984aid=1678708group_id=19984

Thanks,


Stuart
_

Datblygydd Cymwysiadau'r WeWeb Applications Developer
Gwasanaethau Gwybodaeth  Information Services
Prifysgol Cymru Aberystwyth   University of Wales Aberystwyth

E-bost / E-mail: [EMAIL PROTECTED]
 Ffon / Tel: (01970) 622860
_
  

-Original Message-
From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Rafa
Sent: 12 March 2007 08:38
To: dspace-tech@lists.sourceforge.net
Subject: Re: [Dspace-tech] DSpace-tech Digest, Vol 11, Issue 28

Hi,

Dspace 1.4.1.

Thanks


[EMAIL PROTECTED] escribió:
 Send DSpace-tech mailing list submissions to
   dspace-tech@lists.sourceforge.net

 To subscribe or unsubscribe via the World Wide Web, visit
   https://lists.sourceforge.net/lists/listinfo/dspace-tech
 or, via email, send a message with subject or body 'help' to
   [EMAIL PROTECTED]

 You can reach the person managing the list at
   [EMAIL PROTECTED]

 When replying, please edit your Subject line so it is more specific 
 than Re: Contents of DSpace-tech digest...


 Today's Topics:

1. Re: OAI-PMH and Oracle (Stuart Lewis [sdl])


 --

 Message: 1
 Date: Sat, 10 Mar 2007 21:16:51 +
 From: Stuart Lewis [sdl] [EMAIL PROTECTED]
 Subject: Re: [Dspace-tech] OAI-PMH and Oracle
 To: Rafa [EMAIL PROTECTED], dspace-tech@lists.sourceforge.net
 Message-ID: [EMAIL PROTECTED]
 Content-Type: text/plain; charset=ISO-8859-1

 Hi Rafa,

 Which version of DSpace do you use? The reason I ask is that the code 
 which generates the relevant SQL query for your OAI-PMH request 
 changed dramatically between 1.3.* and 1.4, and I don't know what 
 tests were run on the 1.4 version (there was a small bug which slipped 
 through with the postgres version of date handling in OAI-PMH which 
 got fixed in 1.4.1, so a similar small bug may have slipped through the net 
 with Oracle).

 If you can tell me, then we can look into finding the problem. My 
 guess would be the method in Harvest.java which converts datestamps for the 
 SQL.

 Thanks,


 Stuart
 _

 Datblygydd Cymwysiadau'r WeWeb Applications Developer
 Gwasanaethau Gwybodaeth  Information Services
 Prifysgol Cymru Aberystwyth   University of Wales Aberystwyth

 E-bost / E-mail: [EMAIL PROTECTED]
  Ffon / Tel: (01970) 622860 
 _

 On 6/3/07 08:29, Rafa [EMAIL PROTECTED] wrote:

   
 Hi,

 testing dspace-oai my dspace does something strange. It works with 
 some particular verbs such as Identify, ListSets or Listmetada, but 
 not with GetRecord or ListRecords. When I try these two I get an 
 Oracle error
 (ORA-01858 - a non-numeric character was found where a numeric was 
 expected). But, if I modify the granularity in 
 [dspace]/config/oaicat.properties (via
 [dspace]/config/templates/oaicat.properties) from 
 AbstractCatalog.granularity=-MM--DDThh:mm:ssZ to 
 AbstractCatalog.granularity=-MM-DD it works well! What's the 
 problem then? Just when I try to make my dspace pass the oaister 
 register tests, it informs that the granularity isn?t correct:

 'Datestamp in GetRecord response (2007-02-21T10:17:00Z) is not 
 consistent with the days granularity specified in the Identify response'



 Any idea? TIA


 Rafa Carreres
 University of Alicante
 Spain



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 End

Re: [Dspace-tech] OAI-PMH and Oracle

2007-03-10 Thread Stuart Lewis [sdl]
Hi Rafa,

Which version of DSpace do you use? The reason I ask is that the code which
generates the relevant SQL query for your OAI-PMH request changed
dramatically between 1.3.* and 1.4, and I don't know what tests were run on
the 1.4 version (there was a small bug which slipped through with the
postgres version of date handling in OAI-PMH which got fixed in 1.4.1, so a
similar small bug may have slipped through the net with Oracle).

If you can tell me, then we can look into finding the problem. My guess
would be the method in Harvest.java which converts datestamps for the SQL.

Thanks,


Stuart
_

Datblygydd Cymwysiadau'r WeWeb Applications Developer
Gwasanaethau Gwybodaeth  Information Services
Prifysgol Cymru Aberystwyth   University of Wales Aberystwyth

E-bost / E-mail: [EMAIL PROTECTED]
 Ffon / Tel: (01970) 622860
_

On 6/3/07 08:29, Rafa [EMAIL PROTECTED] wrote:

 Hi,
 
 testing dspace-oai my dspace does something strange. It works with some
 particular verbs such as Identify, ListSets or Listmetada, but not with
 GetRecord or ListRecords. When I try these two I get an Oracle error
 (ORA-01858 - a non-numeric character was found where a numeric was
 expected). But, if I modify the granularity in
 [dspace]/config/oaicat.properties (via
 [dspace]/config/templates/oaicat.properties) from
 AbstractCatalog.granularity=-MM--DDThh:mm:ssZ to
 AbstractCatalog.granularity=-MM-DD it works well! What's the problem
 then? Just when I try to make my dspace pass the oaister register tests,
 it informs that the granularity isn´t correct:
 
 'Datestamp in GetRecord response (2007-02-21T10:17:00Z) is not consistent
 with the days granularity specified in the Identify response'
 
 
 
 Any idea? TIA
 
 
 Rafa Carreres
 University of Alicante
 Spain
 
 
 
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Re: [Dspace-tech] How to upgrade databse?

2007-02-26 Thread Stuart Lewis [sdl]
Hi Rudra,
 
First you need to move your old database data onto your new server. See
the following webpage for how to do this:

http://www.postgresql.org/docs/8.1/static/backup.html

The you need to upgrade the database from 1.3.2 to 1.4.

Instructions for how to do this can be found in
[dspace-src]/docs/update.html which says:

===
For PostgreSQL 
[dspace-1.4.x-source]/etc/database_schema_13-14.sql contains the SQL
commands to achieve this for PostgreSQL. To apply the changes, go to the
source directory, and run:

psql -f etc/database_schema_13-14.sql [DSpace database name] -h
localhost
===

I hope this helps,


Stuart
_

Datblygydd Cymwysiadau'r WeWeb Applications Developer
Gwasanaethau Gwybodaeth  Information Services
Prifysgol Cymru Aberystwyth   University of Wales Aberystwyth

E-bost / E-mail: [EMAIL PROTECTED]
 Ffon / Tel: (01970) 622860
_
  



From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of rudra
chandana
Sent: 26 February 2007 03:04
To: dspace-tech@lists.sourceforge.net
Subject: [Dspace-tech] How to upgrade databse?


Hello sir,
   I have collection of database of an institution all ready loaded
in dspace1.3.2.. Now i need to upgrade this to dspace1.4. 
So for this, i ve taken a new system and inserted prequistes to the
system. How should i load that databse to the present system. 
 Could u help me .



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Re: [Dspace-tech] Dspace and Oracle Application Server 10g

2007-02-16 Thread Stuart Lewis [sdl]
Hi José,
 
You should be able to do this quite easily by adding the following to:

[dspace-src]/etc/dspace-web.xml

Add these into the relevant sections:

 context-param
param-nameproperties/param-name
param-value@@dspace.dir@@/config/oaicat.properties/param-value
description
  The location of the oaicat.properties file containing
  datapairs used to initialize the OAI repository software.
/description
  /context-param

 servlet
servlet-nameoai-handler/servlet-name
servlet-classORG.oclc.oai.server.OAIHandler/servlet-class
  /servlet

  servlet-mapping
servlet-nameoai-handler/servlet-name
url-pattern/request/url-pattern
  /servlet-mapping

You can then just recompile, and deploy dspace.war.

Your base URL for OAI-PMH will then be:

www.example.com/dspace/request

Rather than

www.example.com/dspace-oai/request as documented.

Thanks,


Stuart
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Datblygydd Cymwysiadau'r WeWeb Applications Developer
Gwasanaethau Gwybodaeth  Information Services
Prifysgol Cymru Aberystwyth   University of Wales Aberystwyth

E-bost / E-mail: [EMAIL PROTECTED]
 Ffon / Tel: (01970) 622860
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From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of José A. Rubio
Sent: 16 February 2007 10:35
To: dspace-tech@lists.sourceforge.net
Subject: [Dspace-tech] Dspace and Oracle Application Server 10g


Hi,

Nowadays, I am trying to run DSpace 1.4.1 on Oracle Application Server 10g, and 
I have an initial
doubt in this matter. When we create the DSpace binaries, with ant, we obtain 
two WAR files, dspace.war and dspace-oai.war, which are necessary to deploy the 
application in Tomcat.
But, when I try to deploy the application on Oracle Application Server, I can 
only select a WAR file.

So, could I join both WAR files in only one without problems?, has anybody had 
this problem?

Many thanks.
  


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Re: [Dspace-tech] Statistics from 1.3.2 and migrating to 1.4x

2007-02-09 Thread Stuart Lewis [sdl]
Hi Jeffrey,

1.4 suffers from this problem, but it was fixed in 1.4.1. So as long as
you upgrade to 1.4.1 you should be fine.

No logs were ever lost, it was just a problem of parsing the log files
because the format changed slightly between 1.3.2 and 1.4.

Thanks,


Stuart
_

Datblygydd Cymwysiadau'r WeWeb Applications Developer
Gwasanaethau Gwybodaeth  Information Services
Prifysgol Cymru Aberystwyth   University of Wales Aberystwyth

E-bost / E-mail: [EMAIL PROTECTED]
 Ffon / Tel: (01970) 622860
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-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Jeffrey
Trimble
Sent: 08 February 2007 20:53
To: dspace-tech@lists.sourceforge.net
Subject: [Dspace-tech] Statistics from 1.3.2 and migrating to 1.4x

I believe I remember someone mentioning that the current logs used for
1.3.2 do not
work with version 1.4.x   That said, what is the workaround, short 
of  printing off the
last report of statistics under 1.3.2 and starting over with 1.4x?

TIA,




Jeffrey A. Trimble
Systems Librarian
Youngstown State University
Youngstown, OH
[EMAIL PROTECTED]
(330) 941-2483
http://digital.maag.ysu.edu
http://www.maag.ysu.edu
http://jupiter.ysu.edu





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Re: [Dspace-tech] LDAP for DSpace 1.4.1

2007-02-09 Thread Stuart Lewis [sdl]
Hi Jayan,
 
To get LDAP to work, not only do you have to set 'ldap.enable' to true,
you also have to configure the authentication plugins.

In your dspace.cfg you will find a line like:

plugin.sequence.org.dspace.eperson.AuthenticationMethod = \
org.dspace.eperson.PasswordAuthentication 

Change this to:

plugin.sequence.org.dspace.eperson.AuthenticationMethod = \
org.dspace.eperson.LDAPAuthentication

You also asked about privileges for new users. When new users are
auto-created when they first log in via LDAP, they will have no submit
privileges. An administrator will have to grant them appropriate
permissions.

I hope this helps,


Stuart
_

Datblygydd Cymwysiadau'r WeWeb Applications Developer
Gwasanaethau Gwybodaeth  Information Services
Prifysgol Cymru Aberystwyth   University of Wales Aberystwyth

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 Ffon / Tel: (01970) 622860
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From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Jayan
Chirayath Kurian
Sent: 09 February 2007 08:03
To: dspace-tech@lists.sourceforge.net
Subject: [Dspace-tech] LDAP for DSpace 1.4.1



I have installed Dspace 1.4.1 on windows 2003 server. We are trying to
use Windows Active directory ldap authentication for logging to Dspace
using domain supplied user ID/Password from within and outside the
campus.

 

The Dspace LDAP Authentication Configuration Settings are:

 

ldap.enable = true

ldap.provider_url = ldap://X.Y.ntu.edu.sg/o=ntu.edu.sg

ldap.id_field = uid

ldap.object_context = ou= X.Y,o=ntu.edu.sg

ldap.search_context = ou= X.Y

ldap.email_field = mail

ldap.surname_field = sn

ldap.givenname_field = givenName

ldap.phone_field = telephoneNumber

 

When a valid user log in to Dspace through the myDspace option, the
following error message is received from the log file.

 

2007-02-09 13:09:01,655 INFO  org.dspace.eperson.PasswordAuthentication
@
anonymous:session_id=3557F0C69F8F0BEA409C2835BBA20BDC:ip_addr=155.69.24.
193:authenticate:attempting password auth of [EMAIL PROTECTED]

2007-02-09 13:09:01,655 INFO
org.dspace.app.webui.servlet.PasswordServlet @
anonymous:session_id=3557F0C69F8F0BEA409C2835BBA20BDC:ip_addr=155.69.24.
193:failed_login:email= [EMAIL PROTECTED], result=4

 

The LDAPServlet.java file was modified to include 

 

env.put(javax.naming.Context.PROVIDER_URL, ldap://X.Y.ntu.edu.sg;);

env.put(javax.naming.Context.SECURITY_AUTHENTICATION, simple);

env.put(javax.naming.Context.SECURITY_PRINCIPAL,
[EMAIL PROTECTED]);

env.put(javax.naming.Context.SECURITY_CREDENTIALS, );

 

Still it gives the same error mentioned above. I just tried logging
directly using 

 

http://dspacedev1:8080/dspace/ldap-login; and gave a user name and
password registered with the domain. It created the user with no
submission privileges. But this user cannot login from the main
myDspace option. From the log file, it seems the user is automatically
registered and ldap has failed.  

 

2007-02-09 15:48:01,797 WARN  org.dspace.app.webui.servlet.LDAPServlet @
anonymous:session_id=C5DBB32D95BF99F2B0C8908D0F202FF6:ip_addr=155.69.104
.75:ldap_attribute_lookup:type=failed_search
javax.naming.NamingException: [LDAP: error code 1 - 20D6: SvcErr:
DSID-031006CC, problem 5012 (DIR_ERROR), data 0

 ]; remaining name 'ou=X,ou=Y'

2007-02-09 15:48:01,797 INFO  org.dspace.app.webui.servlet.LDAPServlet @
anonymous:session_id=C5DBB32D95BF99F2B0C8908D0F202FF6:ip_addr=155.69.104
.75:autoregister:[EMAIL PROTECTED]

2007-02-09 15:48:01,813 INFO  org.dspace.eperson.EPerson @
anonymous:session_id=C5DBB32D95BF99F2B0C8908D0F202FF6:ip_addr=155.69.104
.75:create_eperson:eperson_id=44

2007-02-09 15:48:01,844 INFO  org.dspace.eperson.EPerson @
anonymous:session_id=C5DBB32D95BF99F2B0C8908D0F202FF6:ip_addr=155.69.104
.75:update_eperson:eperson_id=44

2007-02-09 15:48:01,906 INFO  org.dspace.app.webui.servlet.LDAPServlet @
[EMAIL PROTECTED]:session_id=C5DBB32D95BF99F2B0C8908D0F202FF6:
ip_addr=155.69.104.75:login:type=ldap-login

2007-02-09 15:48:01,906 INFO
org.dspace.app.webui.servlet.MyDSpaceServlet @
[EMAIL PROTECTED]:session_id=C5DBB32D95BF99F2B0C8908D0F202FF6:ip_addr
=155.69.104.75:view_mydspace:

 

Could any one please help regarding this. Is there any other file that
needs to be modified to make LDAP work and access Dspace from the
myDSpace option.

 

Thanks,

Jayan


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Re: [Dspace-tech] dspace-oai not returnning records

2007-02-09 Thread Stuart Lewis [sdl]
If you increase the level of log4j (set to DEBUG in
[dspace]/config/log4j.properties), what do you see going on in
[dspace]/log/dspace.log?

You should see the queries that are being executed, and you can try
these by hand to see what results you get back.


Stuart 

-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Jose
Blanco
Sent: 09 February 2007 14:39
To: Stuart Lewis [sdl]; dspace-tech@lists.sourceforge.net
Subject: Re: [Dspace-tech] dspace-oai not returnning records

Yea, I checked this file and don't see anything different from it was
running.  Here is a URL:

http://deepblue.lib.umich.edu/dspace-oai/request?verb=ListIdentifiersme
tada
taPrefix=oai_dc


Thanks!

-Original Message-
From: Stuart Lewis [sdl] [mailto:[EMAIL PROTECTED]
Sent: Friday, February 09, 2007 4:10 AM
To: Jose Blanco; dspace-tech@lists.sourceforge.net
Subject: RE: [Dspace-tech] dspace-oai not returnning records

Hi Jose,
 
All configuration for the OAI-PMH interface is in
[dspace]/config/oaicat.properties. However there is not much in there
that normally needs changing and could stop it working. 

Have you got some URLs we could look at?

Thanks,


Stuart
_

Datblygydd Cymwysiadau'r WeWeb Applications Developer
Gwasanaethau Gwybodaeth  Information Services
Prifysgol Cymru Aberystwyth   University of Wales Aberystwyth

E-bost / E-mail: [EMAIL PROTECTED]
 Ffon / Tel: (01970) 622860
_
  



From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Jose
Blanco
Sent: 08 February 2007 22:10
To: dspace-tech@lists.sourceforge.net
Subject: [Dspace-tech] dspace-oai not returnning records



I recently upgraded to 1.4.1 and now it seems like ListRecords is not
working in production, but it is in my dev.  It must be some config
change I missed.  Any one have something obvious they think I should
check?






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Re: [Dspace-tech] New logging system (Google Analytics)

2007-02-07 Thread Stuart Lewis [sdl]
Robert Tansley wrote:

 (Shameless plug) you could do worse than Google Analytics
 Stuart Lewis has used this, so maybe he can speak to how well this
works.

If you are interested, there is a short presentation given at a recent
UK  Ireland DSpace user group meeting available at:

http://hdl.handle.net/2160/281 (See: Thanks Google)

or audio:

http://hdl.handle.net/2160/290 

Or feel free to ask questions.

Cheers,


Stuart
_

Datblygydd Cymwysiadau'r WeWeb Applications Developer
Gwasanaethau Gwybodaeth  Information Services
Prifysgol Cymru Aberystwyth   University of Wales Aberystwyth

E-bost / E-mail: [EMAIL PROTECTED]
 Ffon / Tel: (01970) 622860
_
  

-
Using Tomcat but need to do more? Need to support web services, security?
Get stuff done quickly with pre-integrated technology to make your job easier.
Download IBM WebSphere Application Server v.1.0.1 based on Apache Geronimo
http://sel.as-us.falkag.net/sel?cmd=lnkkid=120709bid=263057dat=121642
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Re: [Dspace-tech] Registration with DSpace

2007-01-16 Thread Stuart Lewis [sdl]
Hi Inna,
 
See the following line dspace.cfg:

# Specify the number of the store to use for new bitstreams with this
property
# The default is 0 (zero) which corresponds to the 'assetstore.dir'
above
# assetstore.incoming = 1

Change this to:

assetstore.incoming = 2

Hope this helps,


Stuart
_

Datblygydd Cymwysiadau'r WeWeb Applications Developer
Gwasanaethau Gwybodaeth  Information Services
Prifysgol Cymru Aberystwyth   University of Wales Aberystwyth

E-bost / E-mail: [EMAIL PROTECTED]
 Ffon / Tel: (01970) 622860
_
  



From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Inna
Klimbovskaia
Sent: 16 January 2007 15:30
To: dspace-tech@lists.sourceforge.net
Subject: [Dspace-tech] Registration with DSpace



Hi, 
I am trying to register some images with DSpace.  I want them to belong
to assetstore 2.
Assetstore 1 is already used by something else.

dspace.cfg contains the following:
assetstore.dir = /apps/dspace/assetstore
assetstore.dir.1 =
/mnt/wshare/ovcPathoImages/B1-Anomalies/import_anomalies
assetstore.dir.2 =
/mnt/wshare/ovcPathoImages/B2-Metabolic/import_metabolic
I restarted tomcat...
However, when I run import assetstore 1 is used instead of assetstore 2.
I run import using:
./dsrun org.dspace.app.itemimport.ItemImport --add
[EMAIL PROTECTED]  --collection=123456789/6
--source=/mnt/wshare/ovcPathoImages/B2-Metabolic/import_metabolic
--mapfile=B2-Metabolic

How do I specify assetstore number during import?

Thank you for any help,
Inna



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