Proposal :)

2007-09-30 Thread David Paleino
Hi all, I have some proposals for Debian-Med :) First of all, why don't we use an IRC channel? I've created #debian-med on OFTC (irc://irc.oftc.net/debian-med), you could join whenever you want :) (and we should promote it in our wiki-pages, in our debian.org/ page and in our debian-med.alioth.deb

Re: Proposal :)

2007-09-30 Thread David Paleino
Il giorno Sun, 30 Sep 2007 14:20:38 +0200 (CEST) Andreas Tille <[EMAIL PROTECTED]> ha scritto: > On Sun, 30 Sep 2007, David Paleino wrote: > > ... > > > I've created #debian-med on OFTC > > (irc://irc.oftc.net/debian-med), you could join whenever you want :) (and we > > should promote it in our

Re: Proposal :)

2007-09-30 Thread David Paleino
Il giorno Sun, 30 Sep 2007 14:54:04 +0200 David Paleino <[EMAIL PROTECTED]> ha scritto: > > ... > > [..] we could, for example, show the group's activity, [..] For example, adding CIA.vc's RSS feeds about our SVN repository: http://cia.vc/stats/project/Debian-Med/.rss David -- . ''`. Debi

Re: Proposal :)

2007-09-30 Thread Andreas Tille
On Sun, 30 Sep 2007, David Paleino wrote: It's the server once named irc.debian.org: most debian channels are there ;) Ahhh, please excuse my ignorance. (thus I'm cutting the rest of the reply ;) ) Well, done. :) I think that a Wiki is kinda "limited". If we do something on that alioth s

Re: Proposal :)

2007-10-01 Thread David Paleino
Il giorno Sun, 30 Sep 2007 22:01:17 +0200 (CEST) Andreas Tille <[EMAIL PROTECTED]> ha scritto: > > ... > > Well, I would love to have other interactive tools and I even have some > ideas how to do this. One ide is to have the web pages on > > http://www.debian.org/devel/debian-med > > wel

Re: Proposal :)

2007-10-01 Thread Andreas Tille
On Mon, 1 Oct 2007, David Paleino wrote: To work with the Debian BTS, we could use its SOAP interface [1], that shouldn't be too much difficult. Any work on this is greatly apreciated. About the dependency thing you're talking about, we could parse the *.changes, or even Packages.gz to get t

Re: Proposal :)

2007-10-01 Thread David Paleino
Il giorno Mon, 1 Oct 2007 09:32:13 +0200 (CEST) Andreas Tille <[EMAIL PROTECTED]> ha scritto: > On Mon, 1 Oct 2007, David Paleino wrote: > > > To work with the Debian BTS, we could use its SOAP interface [1], that > > shouldn't be too much difficult. > > Any work on this is greatly apreciated.

Re: Proposal :)

2007-10-01 Thread Andreas Tille
On Mon, 1 Oct 2007, David Paleino wrote: http://pkg-grass.alioth.debian.org/debiangis-status.html In pkg-perl we have kinda the same thing: http://pkg-perl.alioth.debian.org/qa/versions.html Any source code for this available? Well, parsing the diff.gz is one thing but I think we bett

Re: Proposal :)

2007-10-01 Thread David Paleino
Il giorno Mon, 1 Oct 2007 10:41:43 +0200 (CEST) Andreas Tille <[EMAIL PROTECTED]> ha scritto: > On Mon, 1 Oct 2007, David Paleino wrote: > > > In pkg-perl we have kinda the same thing: > > > > http://pkg-perl.alioth.debian.org/qa/versions.html > > Any source code for this available? Sure, it's

Re: Proposal :)

2007-10-01 Thread Andreas Tille
On Mon, 1 Oct 2007, David Paleino wrote: Sure, it's in pkg-perl's SVN repository, see the scripts in: http://svn.debian.org/wsvn/pkg-perl/scripts/qa/?rev=0&sc=0 Thanks for the link. (I usually use combinations of apt-cache, dpkg, grep and sed to retrieve what I need :) ) Fine. :) I've e

Re: Proposal :)

2007-10-01 Thread David Paleino
Il giorno Mon, 1 Oct 2007 11:29:39 +0200 (CEST) Andreas Tille <[EMAIL PROTECTED]> ha scritto: > > ... > > I don't know if you should subscribe. > ... > it is a really low volume list and sometimes there might spring some good > ideas out of these discussions which are finally asked for by our us

Re: Proposal :)

2007-10-01 Thread Charles Plessy
Le Mon, Oct 01, 2007 at 10:41:43AM +0200, Andreas Tille a écrit : > > >Agreed, but most things already are on the QA page (see backports, wnpp, > >popcon) > > Sure. I do not want to duplicate any code. We might even draw the > information > directly from the QA page or use common code that is

Re: Proposal :)

2007-10-01 Thread David Paleino
Il giorno Tue, 2 Oct 2007 15:44:40 +0900 Charles Plessy <[EMAIL PROTECTED]> ha scritto: > Hi all, Hi Charles, > ... > > I have made a pilot page on the wiki using that kind or URLs: > > http://wiki.debian.org/DebianMedBio Well, I meant to _integrate_ those information on a page of ours (with

Re: Proposal :)

2007-10-02 Thread Andreas Tille
On Tue, 2 Oct 2007, Charles Plessy wrote: I do not know how many packages can be incorporated that way, but it easy to construct an URL which create a QA page for everything in our radar. The debtags could be instrumental to this (field::biology plus field::medecine). Example of URL: http://qa

Re: Proposal :)

2007-10-02 Thread Andreas Tille
On Tue, 2 Oct 2007, David Paleino wrote: You're always welcome to join us (me -- I'm currently all alone) on IRC :) Well, I'm technically cut from using IRC during working hours, physically cut from IRC during sleeping hours and most times when I'm sitting on my PC at home I just forget to fir

Re: Proposal :)

2007-10-02 Thread Steffen Moeller
Charles, this is true cool stuff! On Tuesday 02 October 2007 08:44:40 Charles Plessy wrote: > Le Mon, Oct 01, 2007 at 10:41:43AM +0200, Andreas Tille a écrit : > > >Agreed, but most things already are on the QA page (see backports, wnpp, > > >popcon) > > > > Sure. I do not want to duplicate any c

Re: Proposal :)

2007-10-02 Thread Andreas Tille
On Tue, 2 Oct 2007, Steffen Moeller wrote: What should we do with packages that are ambiguous in their assignment to alioth projects? I do only see one pragmatical solution here: The maintainer (in this case you) decides according to his reasons for packaging which packaging team he wants to a

Re: Proposal :)

2007-10-02 Thread David Paleino
Il giorno Sun, 30 Sep 2007 12:17:13 +0200 David Paleino <[EMAIL PROTECTED]> ha scritto: > > ... > > Second, why don't we create something better than a _wiki_ on > http://debian-med.alioth.debian.org ? That's the main page for most of > Alioth's projects. I've actually added a link to redirect p

Re: Proposal :)

2007-10-03 Thread Andreas Tille
On Tue, 2 Oct 2007, David Paleino wrote: What to do: 1) svn co svn+ssh://@svn.debian.org/svn/debian-med/trunk/community/website 2) do whatever you want 3) as soon as "svn commit", the webpage will be updated! Call me stupid but to actually which URL belongs this PHP code? Tests, questions,

Re: Proposal :)

2007-10-03 Thread David Paleino
Il giorno Wed, 3 Oct 2007 22:42:09 +0200 (CEST) Andreas Tille <[EMAIL PROTECTED]> ha scritto: > On Tue, 2 Oct 2007, David Paleino wrote: > > > What to do: > > > > 1) svn co > > svn+ssh://@svn.debian.org/svn/debian-med/trunk/community/website > > 2) do whatever you want > > 3) as soon as "svn comm

Next sprint proposal

2014-02-09 Thread olivier.sal...@codeless.fr
Hi, sorry if mail is a duplicate, I had an issue when I sent my previous mail. After our nice sprint in Stonehaven, I come with a proposal (well ideas in fact) for the next sprint in France. There are several options: 1) in Brittany, in Saint Malo [0]. This is a really nice place (old town from

Re: Next sprint proposal

2014-02-09 Thread Tony Travis
On 09/02/14 15:50, olivier.sal...@codeless.fr wrote: > [...] > 1) in Brittany, in Saint Malo [0]. This is a really nice place (old town > from pirates and corsairs) with beautiful beach. > It needs however a 3 hours train ride from Paris (TGV). There is an > airport near (Dinard, with RyanAir) but

Re: Next sprint proposal

2014-02-09 Thread Sascha Steinbiss
On 09.02.2014 16:50, Tony Travis wrote: > On 09/02/14 15:50, olivier.sal...@codeless.fr wrote: >> [...] 1) in Brittany, in Saint Malo [0]. This is a really nice >> place (old town from pirates and corsairs) with beautiful beach. >> It needs however a 3 hours train ride from Paris (TGV). There is >

Re: Next sprint proposal

2014-02-09 Thread Andreas Tille
On Sun, Feb 09, 2014 at 04:50:06PM +0100, olivier.sal...@codeless.fr wrote: > 1) in Brittany, in Saint Malo [0]. This is a really nice place (old town > from pirates and corsairs) with beautiful beach. > It needs however a 3 hours train ride from Paris (TGV). There is an > airport near (Dinard, wi

DebianMed sprint hotel proposal

2016-12-27 Thread olivier sallou
d not get confirmation)/ This is a proposal, I can still cancel my reservation if needed. If it is ok for you, i suggest you make a reservation at the same place so that we are all in the same location (will be easier to meet and discuss). I have updated wifi with hotel reference for info Olivier

A getData Soc proposal ?

2008-03-12 Thread Charles Plessy
r the > better. We don't need a press release to invite the students - from > past experience, they'll come running the moment that applications > open! :-) > > You don't need to be too specific about your proposal(s) anyway, as > they're only going to be guidanc

Aw: Re: Next sprint proposal

2014-02-10 Thread Steffen Möller
> Gesendet: Sonntag, 09. Februar 2014 um 18:31 Uhr > Von: "Sascha Steinbiss" > An: "Tony Travis" , > "olivier.sal...@codeless.fr" , "Tim Booth" > , "Debian Med Project List" > Betreff: Re: Next sprint proposal > >

Re: DebianMed sprint hotel proposal

2016-12-28 Thread Andreas Tille
with sofa where we could > meet and work together if needed in the evening or time where we are not at > the faculty (based on hotel description and photo, could not get > confirmation)/ > > This is a proposal, I can still cancel my reservation if needed. If it is > ok for you,

Re: DebianMed sprint hotel proposal

2016-12-28 Thread olivier sallou
rianon > > Cobalcescu Grigore 9, Sector 1, 010191 Bucarest, Roumanie > > > > There is free wifi and it seems it has some places with sofa where we > could > > meet and work together if needed in the evening or time where we are not > at > > the faculty (based on hotel d

Re: DebianMed sprint hotel proposal

2016-12-28 Thread Sascha Steinbiss
ing or time where we are not at > > the faculty (based on hotel description and photo, could not get > > confirmation)/ > > > > This is a proposal, I can still cancel my reservation if needed. If it is > > ok for you, i suggest you make a reservation at the same p

Re: DebianMed sprint hotel proposal

2016-12-28 Thread Andreas Tille
On Wed, Dec 28, 2016 at 11:44:53AM +0100, Sascha Steinbiss wrote: > > I personnaly took a single room as it is not expensive and paid by my > > institute. > > I have also just booked a room at that hotel. They’re really inexpensive and > it looks like there are still rooms left :) I also tried

Re: DebianMed sprint hotel proposal

2016-12-28 Thread Sascha Steinbiss
Hi Andreas, >> I have also just booked a room at that hotel. They’re really inexpensive and >> it looks like there are still rooms left :) > > I also tried a reservation and while the page lists empty rooms I failed > in registering using their web interface. I've just send an e-mail and > gue

Re: DebianMed sprint hotel proposal

2016-12-28 Thread Olivier Sallou
- Mail original - > De: "Sascha Steinbiss" > À: "Andreas Tille" > Cc: debian-med@lists.debian.org > Envoyé: Mercredi 28 Décembre 2016 12:23:21 > Objet: Re: DebianMed sprint hotel proposal > > Hi Andreas, > > >> I have also just bo

Re: DebianMed sprint hotel proposal

2016-12-28 Thread Andreas Tille
On Wed, Dec 28, 2016 at 04:06:29PM +0100, Olivier Sallou wrote: > > I now have a printed booking confirmation and I hope I will get some keys > > for > > that once I arrive ;) > > > I used booking.com and got no issue Same here now since I took a couple of hours without any response to my e-mai

Re: [RKI-Spam-Verdacht] Proposal :)

2007-09-30 Thread Andreas Tille
On Sun, 30 Sep 2007, David Paleino wrote: First of all, why don't we use an IRC channel? Good question - I was about to ask for this. Personally I'd like to stay away from chatting techniques because I tend to think that it is drawing another chunk of time from your limited amount of time. Bu

Re: A getData Soc proposal ?

2008-03-13 Thread Andreas Tille
On Thu, 13 Mar 2008, Charles Plessy wrote: I am proposing to extend Steffen's getData work into a Google Summer of Code project, but since it would be hijacking, I will retract it if Steffen does not answer positively on this list. I don't think that Steffen will consider this as unfriendly hi

Re: A getData Soc proposal ?

2008-03-16 Thread Charles Plessy
Le Thu, Mar 13, 2008 at 08:05:26AM +0100, Andreas Tille a écrit : > On Thu, 13 Mar 2008, Charles Plessy wrote: > > >I am proposing to extend Steffen's getData work into a Google Summer of > >Code project, but since it would be hijacking, I will retract it if > >Steffen does not answer positively o

Re: A getData Soc proposal ?

2008-03-18 Thread Charles Plessy
No comment? Can I commit this evening (Japan time)? Have a nice day, -- Charles Le Sun, Mar 16, 2008 at 08:54:40PM +0900, Charles Plessy a écrit : > Le Thu, Mar 13, 2008 at 08:05:26AM +0100, Andreas Tille a écrit : > > On Thu, 13 Mar 2008, Charles Plessy wrote: > > > > >I am proposing to extend

Re: A getData Soc proposal ?

2008-03-18 Thread Andreas Tille
On Tue, 18 Mar 2008, Charles Plessy wrote: No comment? Can I commit this evening (Japan time)? You probably will not make it in the morning Japan time (damn, I've lost my time travel device) - so try evening. ;-)) Thanks for your effort Andreas. -- http://fam-tille.de -- To UNSUB

Re: Aw: Re: Next sprint proposal

2014-02-10 Thread Tim Booth
on: "Sascha Steinbiss" > > An: "Tony Travis" , > > "olivier.sal...@codeless.fr" , "Tim Booth" > > , "Debian Med Project List" > > Betreff: Re: Next sprint proposal > > > > On 09.02.2014 16:50, Tony Travis wrote:

Re: Aw: Re: Next sprint proposal

2014-02-10 Thread Jorge Sebastião Soares
; > > > An: "Tony Travis" , " > olivier.sal...@codeless.fr" , "Tim Booth" < > tbo...@ceh.ac.uk>, "Debian Med Project List" > > > Betreff: Re: Next sprint proposal > > > > > > On 09.02.2014 16:50, Tony Travi

Re: Aw: Re: Next sprint proposal

2014-02-10 Thread Mathieu Malaterre
"Sascha Steinbiss" >> > > An: "Tony Travis" , >> > > "olivier.sal...@codeless.fr" , "Tim Booth" >> > > , "Debian Med Project List" >> > > >> > > Betreff: Re: Next sprint proposal >> >

Re: Aw: Re: Next sprint proposal

2014-02-10 Thread Jorge Sebastião Soares
;> TIM > >> > >> ps. I've not forgotten finishing the meeting report - just been really > >> busy all last week. > >> > >> On Mon, 2014-02-10 at 09:11 +, "Steffen Möller" wrote: > >> > > >> > > Gesende

Proposal: New /etc/alternatives/www-browser*

2002-06-27 Thread Tille, Andreas
[Sorry for list-crossposting. Please continue the discussion at debian-devel because the intent was just to *inform* users in debian-{med,jr} not to discuss there because /etc/alternatives is a general development topic.] Hello, while discussing about Debian Internal Projects with Ben Armstron

Please review "Bits from Debian Med" proposal

2012-03-13 Thread Andreas Tille
Hi, I keep some planned Bits mail since two weeks in my draft box and I think it is time for a review now. Just have a look into svn://svn.debian.org/debian-med/trunk/community/bits/2012-03_bits Thanks in advance for any commitment Andreas. -- http://fam-tille.de -- To UNSUBSCRIBE

Proposal for Registry-display on task pages

2017-10-09 Thread Steffen Möller
Hi Andreas, here some R/Python/PHP-mix pseudocode idea for getting the registry links displayed on the task page: registry_prefix={ "bio.tools"=>"https://bio.tools/";, "RRID" => "http://identifiers.org/rrid/RRID:";, "SciCrunch" => "http://identifiers.org/rrid/RRID:";, "OMICtools" => "https

Re: Proposal: New /etc/alternatives/www-browser*

2002-06-27 Thread Eduard Bloch
Moin Tille,! Tille, Andreas schrieb am Thursday, den 27. June 2002: > /etc/alternatives/[www-]browser > /etc/alternatives/[www-]browser-text > /etc/alternatives/[www-]browser-graphical > /etc/alternatives/[www-]browser-frame-enabled > /etc/alternatives/[www-]browser-java-enabled Basically a good

New use of task files (Was: Proposal :))

2007-10-08 Thread Andreas Tille
[Some interested CDD-Ians in CC because this in principle should go to the debian-custom list but I'm afraid it would miss some people in Debian-Med that are deeply involved. I'll post a summary there once discussion is settled down.] Hi, over night I had another idea how we could get a bett

Project proposal for the Debian Med group

2021-10-02 Thread Guido Rovera
Dear Debian Med members, my name is Guido Rovera and I am a medical doctor but also a linux user and an enthusiast developer. I was referenced to the Debian Med group by a member of the debian-devel IRC channel. *I would like to submit a project proposal to the Debian Med group.* I have recently

patch proposal for bug 588278 in sofa-framework

2011-12-29 Thread olivier.sallou
Hi, I just sent a patch for the sofa-framework issue #588278. It seems to work on my side. I did not updated SVN as I am not the maintainer of the software and it seems that Andreas is working on package (as per a previous email). Olivier -- To UNSUBSCRIBE, email to debian-med-requ...@lists.d

Re: Please review "Bits from Debian Med" proposal

2012-03-13 Thread Olivier Sallou
- Mail original - > De: "Andreas Tille" > À: "Debian Med Project List" > Envoyé: Mardi 13 Mars 2012 15:03:52 > Objet: Please review "Bits from Debian Med" proposal > Hi, > > I keep some planned Bits mail since two weeks in my draft bo

Re: Please review "Bits from Debian Med" proposal

2012-03-13 Thread Thorsten Alteholz
On Tue, 13 Mar 2012, Andreas Tille wrote: Thanks in advance for any commitment I am mentioned at the beginning, so everything is perfect :-). Thorsten -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debia

Re: Proposal 212 - Debian Med BoF (Andreas Tille)

2015-07-04 Thread Andreas Tille
Hi, On Fri, Jun 19, 2015 at 11:32:54PM +0200, Maximiliano Curia wrote: > In previous DebConfs there have been many events called "BoFs" that were > actually presentations of one speaker in the front, sometimes with slides, > usually held in the same big rooms as the other talks. > > In DebConf15,

Re: Proposal for Registry-display on task pages

2017-10-09 Thread Andreas Tille
Hi Steffen, On Mon, Oct 09, 2017 at 04:10:59PM +0200, Steffen Möller wrote: > Hi Andreas, > here some R/Python/PHP-mix pseudocode idea for getting > the registry links displayed on the task page: > > registry_prefix={ > "bio.tools"=>"https://bio.tools/";, > "RRID" => "http://identifiers.org/r

Re: Proposal for Registry-display on task pages

2017-10-11 Thread Steffen Möller
Hi Andreas, On 09.10.17 16:34, Andreas Tille wrote: > Hi Steffen, > > On Mon, Oct 09, 2017 at 04:10:59PM +0200, Steffen Möller wrote: >> Hi Andreas, >> here some R/Python/PHP-mix pseudocode idea for getting >> the registry links displayed on the task page: >> >> registry_prefix={ >> "bio.tools"=

Re: Proposal for Registry-display on task pages

2017-10-11 Thread Andreas Tille
On Wed, Oct 11, 2017 at 06:20:59PM +0200, Steffen Möller wrote: > > One question regarding the 'NA' values. I'd consider it more readable > > if we would just print nothing if there is no entry available. Or am I > > missing something? > > I put them down internally to record that one of us had

Re: Proposal for Registry-display on task pages

2017-10-12 Thread Steffen Möller
On 11.10.17 21:29, Andreas Tille wrote: > On Wed, Oct 11, 2017 at 06:20:59PM +0200, Steffen Möller wrote: >>> One question regarding the 'NA' values. I'd consider it more readable >>> if we would just print nothing if there is no entry available. Or am I >>> missing something? >> I put them down

Re: Proposal for Registry-display on task pages

2017-10-18 Thread Andreas Tille
Hi Steffen, I'm working on some test implementation On Mon, Oct 09, 2017 at 04:10:59PM +0200, Steffen Möller wrote: > > registry_prefix={ > "bio.tools"=>"https://bio.tools/";, > "RRID" => "http://identifiers.org/rrid/RRID:";, > "SciCrunch" => "http://identifiers.org/rrid/RRID:";, How come

Re: Proposal for Registry-display on task pages

2017-10-18 Thread Andreas Tille
On Mon, Oct 09, 2017 at 04:10:59PM +0200, Steffen Möller wrote: > > registry_prefix={ > "bio.tools"=>"https://bio.tools/";, > "RRID" => "http://identifiers.org/rrid/RRID:";, > "SciCrunch" => "http://identifiers.org/rrid/RRID:";, > "OMICtools" => "https://duckduckgo.com/?q=\\"; (a single ba

Re: Proposal for Registry-display on task pages

2017-10-18 Thread Andreas Tille
On Mon, Oct 09, 2017 at 04:10:59PM +0200, Steffen Möller wrote: > "OMICtools" => "https://duckduckgo.com/?q=\\"; (a single backslash at the > end is what I want) The link https://duckduckgo.com/?q=\OMIC_6 should lead to something related to abyss but it does not. :-( Kind regards

Re: Proposal for Registry-display on task pages

2017-10-18 Thread Andreas Tille
On Thu, Oct 19, 2017 at 08:29:15AM +0200, Andreas Tille wrote: > On Mon, Oct 09, 2017 at 04:10:59PM +0200, Steffen Möller wrote: > > "OMICtools" => "https://duckduckgo.com/?q=\\"; (a single backslash at the > > end is what I want) > > The link > > https://duckduckgo.com/?q=\OMIC_6 > >

Re: Proposal for Registry-display on task pages

2017-10-18 Thread Andreas Tille
Hi again, On Thu, Oct 19, 2017 at 08:32:23AM +0200, Andreas Tille wrote: > On Thu, Oct 19, 2017 at 08:29:15AM +0200, Andreas Tille wrote: > > On Mon, Oct 09, 2017 at 04:10:59PM +0200, Steffen Möller wrote: > > > "OMICtools" => "https://duckduckgo.com/?q=\\"; (a single backslash at > > > the end

Re: Proposal for Registry-display on task pages

2017-10-19 Thread Andreas Tille
On Mon, Oct 09, 2017 at 04:10:59PM +0200, Steffen Möller wrote: > registry_prefix={ > "bio.tools"=>"https://bio.tools/";, This entry does not work with your algorithm: bowtie| bio.tools | http://bio.tools/tool/DebianMed/bowtie/1.1.1 I've removed this entry from debian/upstream/metad

Re: Proposal for Registry-display on task pages

2017-10-19 Thread Andreas Tille
On Thu, Oct 19, 2017 at 08:22:34AM +0200, Andreas Tille wrote: > On Mon, Oct 09, 2017 at 04:10:59PM +0200, Steffen Möller wrote: > > > > registry_prefix={ > > "bio.tools"=>"https://bio.tools/";, > > "RRID" => "http://identifiers.org/rrid/RRID:";, > > "SciCrunch" => "http://identifiers.org/rr

Re: Proposal for Registry-display on task pages

2017-10-19 Thread Dylan Aïssi
Hi Andreas, 2017-10-19 8:29 GMT+02:00 Andreas Tille : > On Mon, Oct 09, 2017 at 04:10:59PM +0200, Steffen Möller wrote: >> "OMICtools" => "https://duckduckgo.com/?q=\\"; (a single backslash at the >> end is what I want) > > The link > > https://duckduckgo.com/?q=\OMIC_6 > > should lead

Re: Proposal for Registry-display on task pages

2017-10-19 Thread Andreas Tille
Hi Dylan, On Thu, Oct 19, 2017 at 12:26:44PM +0200, Dylan Aïssi wrote: > Hi Andreas, > > 2017-10-19 8:29 GMT+02:00 Andreas Tille : > > On Mon, Oct 09, 2017 at 04:10:59PM +0200, Steffen Möller wrote: > >> "OMICtools" => "https://duckduckgo.com/?q=\\"; (a single backslash at the > >> end is what

Re: Proposal for Registry-display on task pages

2017-10-20 Thread Dylan Aïssi
Hi Andreas, 2017-10-19 12:40 GMT+02:00 Andreas Tille : > > Well, it might be that we have some typos in our data but this > duckduckgo.com detour seems very suspicious to me and I would love to > avoid this. > The solution will come from OMICtools, they will provide an API that will permit to dir

Re: Proposal for Registry-display on task pages

2017-10-20 Thread Andreas Tille
On Thu, Oct 19, 2017 at 12:26:44PM +0200, Dylan Aïssi wrote: > > > > https://duckduckgo.com/?q=\OMIC_6 > > > > should lead to something related to abyss but it does not. :-( > > > > It's normal, the OMICtools ID here is incorrect, the correct ID is > OMICS_6 with a "S". We started to c

Re: Proposal for Registry-display on task pages

2017-10-20 Thread Steffen Möller
On 19.10.17 08:04, Andreas Tille wrote: > Hi Steffen, > > I'm working on some test implementation Great! > On Mon, Oct 09, 2017 at 04:10:59PM +0200, Steffen Möller wrote: >> registry_prefix={ >> "bio.tools"=>"https://bio.tools/";, >> "RRID" => "http://identifiers.org/rrid/RRID:";, >> "SciCru

Re: Proposal for Registry-display on task pages

2017-10-20 Thread Steffen Möller
On 19.10.17 08:32, Andreas Tille wrote: > On Thu, Oct 19, 2017 at 08:29:15AM +0200, Andreas Tille wrote: >> On Mon, Oct 09, 2017 at 04:10:59PM +0200, Steffen Möller wrote: >>> "OMICtools" => "https://duckduckgo.com/?q=\\"; (a single backslash at the >>> end is what I want) >> The link >> >>

Re: New use of task files (Was: Proposal :))

2007-10-12 Thread David Paleino
Il giorno Tue, 9 Oct 2007 07:58:30 +0200 (CEST) Andreas Tille <[EMAIL PROTECTED]> ha scritto: > [Some interested CDD-Ians in CC because this in principle should go to > the debian-custom list but I'm afraid it would miss some people in > Debian-Med that are deeply involved. I'll post a summar

Re: New use of task files (Was: Proposal :))

2007-10-12 Thread Andreas Tille
On Fri, 12 Oct 2007, David Paleino wrote: http://svn.debian.org/wsvn/cdd/projects/med/trunk/debian-med/tasks/ We should standardize in some way the "Why" field, if we want to keep it in our online pages (well, we could take and show it as-is, but it would be better to organize everything).

Proposal of two new programs: FinchTV and TraceEdit

2011-02-14 Thread Tomasz Makarewicz
Hi, There are two free of charge (unfortunately not open source) programs for Linux which I found very usefull in analysing DNA sequence from chromatogram. The first one is FinchTV: http://www.geospiza.com/Products/finchtv.shtml And the second one is: Ridom TraceEdit: http://www.ridom.de/traceedit/

Proposal of two new programs: FinchTV and TraceEdit

2011-02-14 Thread Tomasz Makarewicz
Hi, There are two free of charge (unfortunately not open source) programs for Linux which I found very usefull in analysing DNA sequence from chromatogram. The first one is FinchTV: http://www.geospiza.com/Products/finchtv.shtml And the second one is: Ridom TraceEdit: http://www.ridom.de/traceedit/

Re: Project proposal for the Debian Med group

2021-10-02 Thread Andreas Tille
gt; IRC channel. > *I would like to submit a project proposal to the Debian Med group.* > I have recently developed a linux-native open-source software called > "TechneNotes" (https://grovera.gitlab.io/technenotes/ - see details below) > that can greatly help medical d

Re: Project proposal for the Debian Med group

2021-11-17 Thread Guido Rovera
; my name is Guido Rovera and I am a medical doctor but also a linux user > and an enthusiast developer. > I was referenced to the Debian Med group by a member of the debian-devel > IRC channel. > *I would like to submit a project proposal to the Debian Med group.* > I have recently

Re: Project proposal for the Debian Med group

2021-11-17 Thread Tony Travis
On 17/11/2021 08:49, Guido Rovera wrote: Dear Debian Med members, I hope this email finds you well, and that your projects are running smoothly. Since I haven't heard back from you, I would like to know if there is anyone interested in the "TechneNotes" project (https://grovera.gitlab.io/techn

Re: Project proposal for the Debian Med group

2021-11-17 Thread Andrius Merkys
Hi Guido, Debian maintainer for CherryTree here. On 2021-11-17 10:49, Guido Rovera wrote: > Since I haven't heard back from you, I would like to know if there is > anyone interested in the "TechneNotes" project > (https://grovera.gitlab.io/technenotes/ > )

Re: Project proposal for the Debian Med group

2021-12-05 Thread Andrius Merkys
Dear Guido, On 2021-12-05 09:35, Guido Rovera wrote: > I kindly ask for your feedback on my previous email, when you have time. Thanks for pinging again. I have somehow skipped your previous email. I will reply to it in a couple of days, sorry. Best, Andrius

Re: patch proposal for bug 588278 in sofa-framework

2011-12-29 Thread Andreas Tille
On Thu, Dec 29, 2011 at 10:00:23AM +0100, olivier.sallou wrote: > I just sent a patch for the sofa-framework issue #588278. Cool, thanks. > It seems to work on my side. > > I did not updated SVN as I am not the maintainer of the software and it > seems that Andreas is working on package (as per

Re: patch proposal for bug 588278 in sofa-framework

2011-12-29 Thread Olivier Sallou
Le 12/29/11 10:30 AM, Andreas Tille a écrit : > On Thu, Dec 29, 2011 at 10:00:23AM +0100, olivier.sallou wrote: >> I just sent a patch for the sofa-framework issue #588278. > Cool, thanks. > >> It seems to work on my side. >> >> I did not updated SVN as I am not the maintainer of the software a

Re: patch proposal for bug 588278 in sofa-framework

2011-12-29 Thread Olivier Sallou
Le 12/29/11 10:30 AM, Andreas Tille a écrit : > On Thu, Dec 29, 2011 at 10:00:23AM +0100, olivier.sallou wrote: >> I just sent a patch for the sofa-framework issue #588278. > Cool, thanks. > >> It seems to work on my side. >> >> I did not updated SVN as I am not the maintainer of the software a

Re: Proposal of two new programs: FinchTV and TraceEdit

2011-02-14 Thread Andreas Tille
On Mon, Feb 14, 2011 at 09:16:01PM +0100, Tomasz Makarewicz wrote: > There are two free of charge (unfortunately not open source) programs for > Linux which I found very usefull in analysing DNA sequence from > chromatogram. > The first one is FinchTV: http://www.geospiza.com/Products/finchtv.shtml

Proposal to start link time optimisation for Debian Med packages

2016-03-30 Thread Steffen Möller
Hello, I had started this friendly and constructive thread on Debian Devel on link time optimisation https://lists.debian.org/debian-devel/2016/03/msg00399.html and my personal consensus is that we should possibly start with the most rewarding scientific packages of ours to see how it goes. What

Re: Proposal to start link time optimisation for Debian Med packages

2016-03-30 Thread Sascha Steinbiss
Hi Steffen, […] > * minimal impact on regular packaging - maintainers should not need to > worry unless they do want to learn about it. To be achieved by changes > to debhelper and the sharing of our packaging in our source code > repositories. > > * LTO flags should be optionally excluded from t

Re: Proposal to start link time optimisation for Debian Med packages

2016-03-30 Thread Charles Plessy
Le Wed, Mar 30, 2016 at 01:36:58PM +0200, Steffen Möller a écrit : > > I had started this friendly and constructive thread on Debian Devel on > link time optimisation > > https://lists.debian.org/debian-devel/2016/03/msg00399.html > > and my personal consensus is that we should possibly start wi

Re: Proposal to start link time optimisation for Debian Med packages

2016-03-31 Thread Fabian Klötzl
Hi all, On 30.03.2016 22:28, Sascha Steinbiss wrote: >> The promotion of this enhancement I consider to be exceptionally >> important, especially so if we can tie this up with the continuous >> integration testing and some benchmarking. For all the folks that wait >> over some NGS data set to be a

Re: Proposal to start link time optimisation for Debian Med packages

2016-03-31 Thread Steffen Möller
On 31/03/16 02:34, Charles Plessy wrote: > Le Wed, Mar 30, 2016 at 01:36:58PM +0200, Steffen Möller a écrit : >> I had started this friendly and constructive thread on Debian Devel on >> link time optimisation >> >> https://lists.debian.org/debian-devel/2016/03/msg00399.html >> >> and my personal

Re: Proposal to start link time optimisation for Debian Med packages

2016-03-31 Thread Petter Reinholdtsen
[Steffen Möller] > @Petter, Holger: For packages featuring LTO, would you consider it > reasonable to run those twice in the CI, i.e. with and without the LTO > optimisation? I doubt ci.debian.net is the right tool for this, as it is supposed to run tests on the installed packages, not during buil

Please check implementation (Was: Proposal for Registry-display on task pages)

2017-10-19 Thread Andreas Tille
Hi, I've posted a set of questions today to this list and they are remaining **open**. So those who feel able to answer the questions please check out this thread. Despite the open questions I tried an example implementation: https://blends.debian.org/med/tasks/bio To mark different reposit

Re: [proposal] Simplified junior tags & debtags-based replacement for metapackages (fwd)

2006-02-24 Thread Andreas Tille
: Fri, 24 Feb 2006 07:32:50 -0400 From: Ben Armstrong <[EMAIL PROTECTED]> To: Custom Debian Distributions Cc: "debtags-devel@lists.alioth.debian.org" , Debian Junior Subject: Re: [proposal] Simplified junior tags & debtags-based replacement for metapackages Resent-

Packaging TechneNotes [Was: Re: Project proposal for the Debian Med group]

2021-12-08 Thread Andrius Merkys
Dear Guido, On 2021-11-20 13:48, Guido Rovera wrote: > According to the wiki page that you linked, the only "upstream" tasks > that I would need to perform are: > - Create an official tarball > - Add licence details to the repo Yes, these are absolutely necessary requirements for the source packa

FWD: [Release goal proposal: Archive-wide build-arch and build-indep support]

2011-11-05 Thread Charles Plessy
goal proposal: Archive-wide build-arch and build-indep support Message-Id: <2005202219.be91c2000a...@thykier.net> -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Hi, I would like to propose the goal of getting archive-wide support for the optional debian/rules targets "build-arch&

Re: [Release goal proposal: Archive-wide build-arch and build-indep support]

2011-11-06 Thread Mathieu Malaterre
Charles, On Sun, Nov 6, 2011 at 12:56 AM, Charles Plessy wrote: > The Debian Med packages that would need to be corrected are the following: > Debian Med Packaging Team [...] >   dicomscope Will do. Thanks for the reminder. -- Mathieu -- To UNSUBSCRIBE, email to debian-med-requ...@lists.deb

Re: Packaging TechneNotes [Was: Re: Project proposal for the Debian Med group]

2021-12-08 Thread Andreas Tille
Hi, Am Wed, Dec 08, 2021 at 04:21:30PM +0200 schrieb Andrius Merkys: > Dear Guido, > > On 2021-11-20 13:48, Guido Rovera wrote: > ... ... all well said. > You may start from Debian packaging portal [1], but I cannot seem to > find it presenting the modern tools which highly simplify packaging >

Re: Packaging TechneNotes [Was: Re: Project proposal for the Debian Med group]

2021-12-08 Thread Andrius Merkys
Hello, On 2021-12-08 17:15, Andreas Tille wrote: > Am Wed, Dec 08, 2021 at 04:21:30PM +0200 schrieb Andrius Merkys: >> On 2021-11-20 13:48, Guido Rovera wrote: >> You may start from Debian packaging portal [1], but I cannot seem to >> find it presenting the modern tools which highly simplify packa

Debian-Med policy proposal: 64-bit & little-endian only* for new packages

2024-03-28 Thread Michael R. Crusoe
y of bringing up new architectures: 1. This is an aspect of Debian I find to be really impressive! I'm very grateful for it, and I have seen how other packaging systems struggle when they have to add a new architecture for the first time. 2. Note that this policy proposal is not "

Re: FWD: [Release goal proposal: Archive-wide build-arch and build-indep support]

2011-11-06 Thread Andreas Tille
Hi, On Sun, Nov 06, 2011 at 08:56:45AM +0900, Charles Plessy wrote: > The Debian Med packages that would need to be corrected are the following: > ... > (list of packages which are not using short dh or cdbs) I'd strongly vote for using either short dh notation (prefered) or cdbs because when doi

GSoC 2015 - should there be a Debian Med / Blend proposal separate from Debian?

2014-10-07 Thread Steffen Möller
Hello, The projects of Debian for the Google Summer of Code http://www.google-melange.com/gsoc/homepage/google/gsoc2015 have their focus on the Debian infrastructure. It was quite some earning experience for me, but eventually I have grasped that this was a good thing. However, my personal ambit

Any volunteer for Sprint organisation (Was: Proposal for Registry-display on task pages)

2017-10-20 Thread Andreas Tille
Hi folks, up to now nobody volunteered for Sprint organisation. I think we should be quick to make up our minds to organise traveling. So, is there any volunteer? Kind regards Andreas. On Fri, Oct 20, 2017 at 09:34:31AM +0200, Dylan Aïssi wrote: > Hi Andreas, > > 2017-10-19 12:40 G

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