Dear all,
I'm trying to import my data in Freesurfer. I have it on a folder on my
desktop. I set my SUBJECTS_DIR variable to my subjects directory (other
folder on my desktop). When I run recon-all -i paths_to_myimputfiles
-subjid my_sub_name, I got:
[cpellica@wmen-ps2208 freesurfer]$ recon-all -
Clelia,
Ide be willing to bet the error has something to do with the "%" sign in
the path to the data file. Would it be possible for you to place the
file somewhere such the the absolute path does not contain a "%" sign?
-Zeke
On 06/11/2013 12:37 PM, clelia pellicano wrote:
> Dear all,
>
> I'm
Hi clelia
can you ls that file and confirm that exists? And check the permissions?
Also, note that even if it had found it you didn't tell it to do anything.
You probably want to specify -all on the recon-all command line as well.
cheers
Bruce
On Tue, 11 Jun 2013, clelia pellicano wrote:
D
Hi,
thank you so much, now it's working! I have deleted the "%" from the path
(moving the files), and now it's ok.
Thank you again,
C.
On Tue, Jun 11, 2013 at 5:43 PM, Bruce Fischl wrote:
> Hi clelia
>
> can you ls that file and confirm that exists? And check the permissions?
> Also, note that
thanks Zeke!
Bruce
On Tue, 11 Jun 2013, clelia pellicano wrote:
Hi,
thank you so much, now it's working! I have deleted the "%" from the path
(moving the files), and now it's ok.
Thank you again,
C.
On Tue, Jun 11, 2013 at 5:43 PM, Bruce Fischl
wrote:
Hi clelia
can you ls that
