Hi, thank you so much, now it's working! I have deleted the "%" from the path (moving the files), and now it's ok. Thank you again,
C. On Tue, Jun 11, 2013 at 5:43 PM, Bruce Fischl <fis...@nmr.mgh.harvard.edu>wrote: > Hi clelia > > can you ls that file and confirm that exists? And check the permissions? > Also, note that even if it had found it you didn't tell it to do anything. > You probably want to specify -all on the recon-all command line as well. > > cheers > Bruce > > > On Tue, 11 Jun 2013, clelia pellicano wrote: > > Dear all, >> >> I'm trying to import my data in Freesurfer. I have it on a folder on my >> desktop. I set my SUBJECTS_DIR variable to my subjects directory (other >> folder on my desktop). When I run recon-all -i paths_to_myimputfiles >> -subjid >> my_sub_name, I got: >> >> [cpellica@wmen-ps2208 freesurfer]$ recon-all -i >> /home/cpellica/Desktop/MRIs%**201-5/001/IM-0003-0001.dcm -subjid 001 >> ERROR: cannot find /home/cpellica/Desktop/MRIs%** >> 201-5/001/IM-0003-0001.dcm >> Linux wmen-ps2208 2.6.32-358.11.1.el6.x86_64 #1 SMP Wed May 15 10:48:38 >> EDT >> 2013 x86_64 x86_64 x86_64 GNU/Linux >> >> recon-all -s exited with ERRORS at Tue Jun 11 17:24:51 BST 2013 >> >> I don't understand why it is not finding my data since they are on my >> desktop. >> Could you help me? >> >> >> Thanks >> >> >> C. >> >> >> > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/**complianceline<http://www.partners.org/complianceline>. > If the e-mail was sent to you in error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. >
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