Dear all, I'm trying to import my data in Freesurfer. I have it on a folder on my desktop. I set my SUBJECTS_DIR variable to my subjects directory (other folder on my desktop). When I run recon-all -i paths_to_myimputfiles -subjid my_sub_name, I got:
[cpellica@wmen-ps2208 freesurfer]$ recon-all -i /home/cpellica/Desktop/MRIs%201-5/001/IM-0003-0001.dcm -subjid 001 ERROR: cannot find /home/cpellica/Desktop/MRIs%201-5/001/IM-0003-0001.dcm Linux wmen-ps2208 2.6.32-358.11.1.el6.x86_64 #1 SMP Wed May 15 10:48:38 EDT 2013 x86_64 x86_64 x86_64 GNU/Linux recon-all -s exited with ERRORS at Tue Jun 11 17:24:51 BST 2013 I don't understand why it is not finding my data since they are on my desktop. Could you help me? Thanks C.
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