Dear all,
For the error
freeview.bin: error while loading shared libraries: libjpeg.so.62: cannot
open shared object file: No such file or directory
sudo apt-get install libjpeg62
did the trick. Freeview is running fine
For the error
*libGL error: failed to load driver: swrast*
*libGL
Markus,
I have never seen those errors before. But a little googling suggested
perhaps running the program as follows:
~$ LIBGL_DEBUG=verbose ./tkmedit bert orig.mgz
Im a little at a lose at what else to try because we have freesurfer
installed on pretty much stock Ubuntu platforms and it
Dear Zeke,
Thanks for stepping in!
$ LIBGL_DEBUG=verbose tkmedit bert orig.mgz
libGL: OpenDriver: trying /usr/lib/x86_64-linux-gnu/dri/tls/swrast_dri.so
libGL: OpenDriver: trying /usr/lib/x86_64-linux-gnu/dri/swrast_dri.so
libGL error: failed to load driver: swrast
Reading
Dear experts!
I installed freesurfer on a machine running Ubuntu 12.04.
I have got some error messages when testing:
~$ freeview -v $SUBJECTS_DIR/bert/mri/norm.mgz -v
$SUBJECTS_DIR/bert/mri/aseg.mgz:colormap=lut:opacity=0.2 -f
$SUBJECTS_DIR/bert/surf/lh.white:edgecolor=yellow -f
Dear Pedro,
I would like to start with the tutorials but I don't have permission to copy
the data to the subjects directory, how I can change this?
Best regards,
Carolina
2011/2/22 Pedro Paulo de Magalhães Oliveira Junior p...@netfilter.com.br
try the command:
sudo apt-get install tcl
--
try the command:
sudo apt-get install tcl
-- PPJ
Please: cc the freesurfer list when answering
2011/2/22 Carolina Valencia cvalen...@linkdx.com.co
Hi Pedro,
Finally, I could install it with the license file and the environment is
properly set without warnings.
But trying to test it,
Hi Bruce,
I'm experimenting problems with the installation on Ubuntu too.
There's is warning in the welcome message, it seems that something is
missing:
freesurfer-Linux-centos4_x86_64-stable-pub-v5.0.0
Setting up environment for FreeSurfer/FS-FAST (and FSL)
WARNING:
Please send the result of the command:
uname -a
On Mon, Feb 21, 2011 at 10:31, Carolina Valencia cvalen...@linkdx.com.cowrote:
Hi Bruce,
I'm experimenting problems with the installation on Ubuntu too.
There's is warning in the welcome message, it seems that something is
missing:
It seems you are running the 64-bit version of FreeSurfer in a 32-bit OS
2011/2/21 Carolina Valencia cvalen...@linkdx.com.co
Linux cvalencia-Precision-WorkStation-T3400 2.6.35-25-generic-pae
#44-Ubuntu SMP Fri Jan 21 19:01:46 UTC 2011 i686 GNU/Linux
Thanks,
2011/2/21 Pedro Paulo de
run this command
sudo rm -rf $FREESURFER_HOME
2011/2/21 Carolina Valencia cvalen...@linkdx.com.co
Thanks Pedro,
How I uninstall that version to re-install the correct version?
I look for some answers and try
rm -rf $FREESURFER_HOME
It says that I don't have permission,how I can
Hello, Freesurfer experts:
I am new to freesurfer and try to
install the newest version of freesurfer in Ubuntu system. I closely
followed the instructions, and the only difference is that I
installed it in my Documents, instead of local folder.
Below
Hi Jie,
what hardware are you using? Is it a 64 bit operating system?
cheers
Bruce
On Sat, 19 Feb
2011, Liukarl wrote:
Hello, Freesurfer experts:
I am new to freesurfer and try to
install the newest version of freesurfer in Ubuntu system. I closely
followed the instructions, and
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