Re: [Jmol-users] Using the sync command for 3D/stereographic visualization (on a GeoWall)

2009-01-12 Thread Angel Herraez
A paper that may be worth reading in this respect: * (2008) Adapting a single-user, single-display molecular visualization application for use in a multi-user, multi-display environment. http://www.cliftonforlines.com/papers/2008_forlines_molvis.pdf (now linked from MultiUser_Jmol and

Re: [Jmol-users] Using the sync command for 3D/stereographic visualization (on a GeoWall)

2008-11-25 Thread Robert Hanson
Dean, try http://chemapps.stolaf.edu/jmol/docs/examples-11/syncstereo.htm I know for your use you need the table cells centered -- some experimentation there will be necessary. The new command is: sync * stereo files are in http://chemapps.stolaf.edu/jmol/docs/examples-11/Jmol-11.zip Bob

Re: [Jmol-users] Using the sync command for 3D/stereographic visualization (on a GeoWall)

2008-11-25 Thread Dean Johnston
You're too fast! I just got my single applet version working (I think - we don't have a GeoWall setup here). Centering/aligning shouldn't be a problem if I can properly detect the window width and position using CSS. Thanks! Dean On Tue, Nov 25, 2008 at 3:16 PM, Robert Hanson [EMAIL

Re: [Jmol-users] Using the sync command for 3D/stereographic visualization (on a GeoWall)

2008-11-24 Thread Robert Hanson
OK, do let me know how that goes. I have a setup here I'm supposed to try Jmol on as well. In the mean time, I'll think about the possibility of using one applet to transmit screen buffers to two different applet windows. Sort of a dummy applet idea. You would do all control on one, but the

Re: [Jmol-users] Using the sync command for 3D/stereographic visualization (on a GeoWall)

2008-11-23 Thread Robert Hanson
Oh, I see. That's easy! Just turn sync off, rotate one model -5 degrees around the Y axis (rotate y -5), and then turn mouse syncing back on. They will now track properly as stereo images. On Sat, Nov 22, 2008 at 9:22 PM, Dean Johnston [EMAIL PROTECTED] wrote: Bob, I guess I was asking if

Re: [Jmol-users] Using the sync command for 3D/stereographic visualization (on a GeoWall)

2008-11-23 Thread Dean Johnston
I'm not sure it's that easy - I agree that rotating one model as you describe would give you stereo perspective initially. But as soon as you rotate the model(s) you destroy the difference in perspective. For example, if I have two parallel lines pointing directly at the viewer, to give

Re: [Jmol-users] Using the sync command for 3D/stereographic visualization (on a GeoWall)

2008-11-22 Thread Robert Hanson
Dean, you need to use stereo, not sync. Sync will certainly drive the viewer nuts -- there will be a slight delay between eyes. George Lisensky has used Jmol with GeoWall -- ask him how he does it. I'm pretty sure you just make the applet or application 2048 pixels wide and then direct the left

Re: [Jmol-users] Using the sync command for 3D/stereographic visualization (on a GeoWall)

2008-11-22 Thread Dean Johnston
Bob, I guess I was asking if the sync command could be modified (feature request!) such that two different perspectives could be shown in two different applets. (I realize that the delay might be an issue, but in my testing on my computer it wasn't noticeable - FYI, I only have syncMouse on. If

[Jmol-users] Using the sync command for 3D/stereographic visualization (on a GeoWall)

2008-11-21 Thread Dean Johnston
Jmol users, I've had a request to make my Jmol pages work with a GeoWall-type setup. (If you're not familiar with GeoWall (www.geowall.org), it's a low-cost stereo projection system. You setup a computer with a dual-head video card, two projectors with polarizing filters, and align the two

Re: [Jmol-users] Using the sync command for 3D/stereographic visualization (on a GeoWall)

2008-11-21 Thread Rzepa, Henry
Jmol users, I've had a request to make my Jmol pages work with a GeoWall-type setup. (If you're not familiar with GeoWall (http://www.geowall.orgwww.geowall.org), it's a low-cost stereo projection system. You setup a computer with a dual-head video card, two projectors with polarizing

Re: [Jmol-users] Using the sync command for 3D/stereographic visualization (on a GeoWall)

2008-11-21 Thread Egon Willighagen
On Sat, Nov 22, 2008 at 8:42 AM, Rzepa, Henry [EMAIL PROTECTED] wrote: I request this occasionally. The dual head video card (NVidia Quadro 5X0) supports the quad buffered stereo openGL standards,but Jmol does not as I understand. There are other alternatives that do, ie Pymol, VMD,