Bob,
I tried that, and it works with mouse control on my desktop, but the iPad has a
problem.
For the desktop/mouse, I can bind _rotateSelected to LEFT, and pick up the
click/select of a model with a hover call back. Binding LEFT to _rotateSelected
evidently loses the original click select of
why isn't it just
bind "LEFT" "_rotateSelected"
?
On Wed, Feb 20, 2013 at 9:46 AM, Otis Rothenberger wrote:
> Bob,
>
> To set up rotation of selected models on an iPad, I have to bind "LEFT" to
> the rotation so that I can eliminate the need for a modifier key. I'm using
> the following bindin
Hi,
I finally got time to test it and it works like a charm. Thank you Bob!
Alex
- Ursprüngliche Mail -
> Von: "Robert Hanson"
> An: jmol-users@lists.sourceforge.net
> Gesendet: Dienstag, 9. November 2010 14:24:26
> Betreff: Re: [Jmol-users] rotate selected atoms
Curious about the "set picking dragmolecule" and the "compare" commands, I have
just made some tests with the latest jmol.jar file from Bob's repository
(12.1.22_dev).
I used a beta globin and an alpha globin pdb files, loaded in 2 different frames
the "set picking dragmolecule" command works fi
ailto:osrot...@chemagic.com>>
> An: jmol-users@lists.sourceforge.net
<mailto:jmol-users@lists.sourceforge.net>
> Gesendet: Dienstag, 9. November 2010 06:06:00
> Betreff: Re: [Jmol-users] rotate selected atoms using the mouse
> Hi Alexander and Bob-
&g
on does not matter. Pick/drag the
>> protein chain a moves just the protein chain a. Pick/drag plm moves the
>> protein chain a and all bond non protein molecules, including plm. This is
>> asymmetric, is there a rationale for that? Actually I do not mind, I just
>> want a wa
rotate, translate) only selected atoms using the mouse.
>
>
>
> - Ursprüngliche Mail -
> > Von: "Otis Rothenberger"
> > An: jmol-users@lists.sourceforge.net
> > Gesendet: Dienstag, 9. November 2010 06:06:00
> > Betreff: Re: [Jmol-users] rotate selecte
-
> Von: "Otis Rothenberger"
> An: jmol-users@lists.sourceforge.net
> Gesendet: Dienstag, 9. November 2010 06:06:00
> Betreff: Re: [Jmol-users] rotate selected atoms using the mouse
> Hi Alexander and Bob-
>
> I'm going to go out on a limb here and say that
Oh my. I had forgotten about this. If you actually open Bob's Jmol model
kit mode, turn the substrate pink:
set modelKitMode;set selectHetero on;select hetero;color pink
and use the drag (shift to rotate) commands to move the substrate
slightly out of place, then the drag/minimize command will
Hi Alexander and Bob-
I'm going to go out on a limb here and say that I think Alexander wants
to do something that's not as complex as it seems. While my description
below uses the links on my page, I am really just using Jmol's model kit
mode commands.
I'll use lactose permease (courtesy of
That's going to rotate the atoms about a specific molecular axis. Do you
want it to rotate about a specific window axis, regardless of how the model
is oriented? Is that the problem? There might be a way of doing that with
quaternions.
On Mon, Nov 8, 2010 at 12:39 PM, Alexander Rose wrote:
> Hi
Alexander,
I'm still a little confused about your objective. Try this. Go to:
http://chemagic.com/web_molecules/script_page_large.aspx
Click the Molecular Editor link. Click "duplicate." There are now two
models in the window. Click "move." After you click "move," either model
can be click/dr
Hi Otis,
Am 08.11.2010 um 20:22 schrieb Otis Rothenberger:
> Hi Alexander-
>
> I'm not sure exactly what you want to do, but if you want to
> independently translate or rotate non-bonded models, or rotate about a
> given bond (i.e. conformation rotation), then there is a really simple
> way t
Hi Alexander-
I'm not sure exactly what you want to do, but if you want to
independently translate or rotate non-bonded models, or rotate about a
given bond (i.e. conformation rotation), then there is a really simple
way to do either of these.
1) With one or more models in the same window, the
I really just want to use it as a quick and dirty way of editing
molecules without having to script each change -- especially for
macromolecules where the general shape can be more important for
visualisation than precise bond angles. It's certainly a niche feature
and if it's not intended to b
ah, ok. I see. Hard to believe this is going to be useful, considering the
degrees of freedom. How do you figure it will be used?
On Thu, Apr 30, 2009 at 9:26 AM, Chris Foley wrote:
> I'm afraid not. It appeared to work when the water molecule was selected.
> But all the atoms of HOH were selec
I'm afraid not. It appeared to work when the water molecule was
selected. But all the atoms of HOH were selected. When I tried
selecting a methyl group (select c13,h16,h17,h18) the whole caffeine
molecule was rotated.
In case it helps, I used Windows XP, Sun Java plugin 1.6.0_13 on
Internet Ex
Did it work at http://chemapps.stolaf.edu/jmol/docs/examples-11/new.htm
# 30?
On Thu, Apr 30, 2009 at 5:54 AM, Chris Foley wrote:
> Thanks for the reply Robert. I downloaded 11.7.33 but unfortunately I
> can't get the rotation to work. I can translate the atoms as you describe
> but can't rot
Thanks for the reply Robert. I downloaded 11.7.33 but unfortunately I
can't get the rotation to work. I can translate the atoms as you
describe but can't rotate them.
Also, is it possible to change the point the atoms rotate around? The
kind of thing I want to do is rotate a group around the a
It's in there, at least for Jmol 11.7. See
http://chemapps.stolaf.edu/jmol/docs/examples-11/new.htm
30. selective atom rotation and translation
# Using set dragSelected in Jmol 11.7.25 you can move selected atoms around,
translating them with ALT-SHIFT-LEFT mouse and rotating them around their
ge
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