[sage-devel] 90% doctest coverage update for 13 June 2010

2010-06-13 Thread Minh Nguyen
Hi folks, I thought I should share with you that the 90% doctest coverage goal is moving very well. Within days of my report of the current doctest coverage status in Sage 4.4.4.alpha0, we see a number of modules being raised to 100% coverage: * #9214 combinat/lyndon_word.py * #9213 combinat/pose

[sage-devel] remove server/notebook/worksheet.py from Sage library?

2010-06-13 Thread Minh Nguyen
Hi folks, Ticket #3565 [1] aims to bring the doctest coverage of the module server/notebook/worksheet.py up to 100%. As I understand it, this module is no longer maintained nor being worked on because Sage notebook development is now done in the SageNB repository. For any Sage notebook experts out

[sage-devel] Re: Error building Sage 4.4.3 under vanilla Debian lenny amd64: Error while installing flint

2010-06-13 Thread Dima Pasechnik
Hi, is your Debian installation up to date? It could be that an older gcc you have by default is due to this, and if so, there is no telling as to what goes wrong. Just in case you wonder what I mean, you ought to run aptitude update and then aptitude safe-upgrade and see if there are no "held ba

[sage-devel] Re: Error building Sage 4.4.3 under vanilla Debian lenny amd64: Error while installing flint

2010-06-13 Thread Dima Pasechnik
Is your Debian installation up to date? Your old compiler etc might be due to this. If not, please do the usual thing (aptitude update; aptitude safe- upgrade) and see if this helps.. Just in case, Dima On 13 June, 00:46, orca wrote: > Ok Marik > > I checked that the default g++ under lenny is s

[sage-devel] Re: 90% doctest coverage update for 13 June 2010

2010-06-13 Thread Simon King
Hi Minh, On 13 Jun., 12:00, Minh Nguyen wrote: > ... > All of the above tickets have positive review! If anyone has some > time, here are some doctest tickets needing some attention: > > * #9222 databases/conway.py > * #9066 shapes2.py And there is also #8800, which raises the coverage of sage.c

[sage-devel] Re: 90% doctest coverage update for 13 June 2010

2010-06-13 Thread Simon King
Hi Minh, Could be that a preliminary version of this post was already sent by accident -- sorry, if this was the case. On 13 Jun., 12:00, Minh Nguyen wrote: > I thought I should share with you that the 90% doctest coverage goal > is moving very well. Great! >... > All of the above tickets have

[sage-devel] Re: Error building Sage 4.4.3 under vanilla Debian lenny amd64: Error while installing flint

2010-06-13 Thread orca
Dear Kirby and Pasechnik, Sorry for the waste of time: I have now upgraded my Debian lenny system and, as Marik above has stated, it now does have matched 4.3.2 versions of all three compilers (gcc, g++ and gfortran). I am now building Sage from scratch and everything seems to be going fine. I wil

[sage-devel] Try not to cripple performance for everyone

2010-06-13 Thread Dr. David Kirkby
I've just been looking at the atlas package, and see that people have really tried to cripple the performance. 1) Make is unset on all platforms. Would it not be wiser to find out where problems exist, and do things like this for only one platform, or one distribution? It's clear the ATLAS de

[sage-devel] Re: How can this be avoided in future?

2010-06-13 Thread Ben Goodrich
On Jun 12, 8:09 am, David Kirkby wrote: > kir...@sage:~$ /usr/local/bin/sage > -- > | Sage Version 4.4.3, Release Date: 2010-06-04                       | > | Type notebook() for the GUI, and license() for information.        | >

Re: [sage-devel] Try not to cripple performance for everyone

2010-06-13 Thread Dr. David Kirkby
On 06/13/10 03:25 PM, Dr. David Kirkby wrote: Also, the number of threads was set to zero with the option -t 0 when ATLAS was configured. That must hit runtime performance badly. Dave I guess zero threads would have a pretty fatal effect on performance! Threading had been disabled in ATLA

[sage-devel] Re: How can this be avoided in future?

2010-06-13 Thread Ben Goodrich
On Jun 12, 9:07 am, kcrisman wrote: > > 1) Get a list of recommended packages from that version of R - > > preferably in a way that does not require them to be hard-coded in a > > test script, but generated by R. > > Unfortunately, I couldn't find one when I was looking for it. It might > be worth

Re: [sage-devel] Ubuntu 10.4 LTS JMOL applet source is not properly provided

2010-06-13 Thread Cedric Sodhi
Can at least someone confirm that it SHOULD run well in 10.4 LTS and Firefox? It's a pretty big problem not to have any 3d plots at all! On 06/12/2010 03:27 PM, Cedric Sodhi wrote: Hello everyone, this problem has been brought up several times, yet all the threads end without any solution what

Re: [sage-devel] Ubuntu 10.4 LTS JMOL applet source is not properly provided

2010-06-13 Thread Jan Groenewald
Hi On Sun, Jun 13, 2010 at 05:09:54PM +0200, Cedric Sodhi wrote: > Can at least someone confirm that it SHOULD run well in 10.4 LTS and Firefox? > It's a pretty big problem not to have any 3d plots at all! It should. Please check a recent thread about it: http://groups.google.com/group/sage-deve

[sage-devel] Re: Ubuntu 10.04, JMOL, Java

2010-06-13 Thread ManDay
I too haven't got JMol to work in the NB, although it works fine as the standalone application when run from the commandline. I don't see how the site you mentioned would help. Installing JAVA was no problem and it works just fine, including JMol applets on the jmol.sourceforge site. This is most l

Re: [sage-devel] Re: Ubuntu 10.04, JMOL, Java

2010-06-13 Thread Paulo César Pereira de Andrade
2010/6/13 ManDay : > I too haven't got JMol to work in the NB, although it works fine as > the standalone application when run from the commandline. I don't see > how the site you mentioned would help. Installing JAVA was no problem > and it works just fine, including JMol applets on the jmol.sourc

[sage-devel] Re: Ubuntu 10.4 LTS JMOL applet source is not properly provided

2010-06-13 Thread Adam Webb
On Jun 13, 5:09 pm, Cedric Sodhi wrote: > Can at least someone confirm that it SHOULD run well in 10.4 LTS and Firefox? > It's a pretty big problem not to have any 3d plots at all! > Hi, I didn't want to just say "works for me" but I guess since you asked: I am running Ubuntu 10.04 x86_64, Fi

[sage-devel] Re: Error building Sage 4.4.3 under vanilla Debian lenny amd64: Error while installing flint

2010-06-13 Thread orca
Hi there, The build process completed SUCCESSFULLY! Everything seems to be working fine! Thank you all again!! On Jun 13, 10:59 am, orca wrote: > Dear Kirby and Pasechnik, > > Sorry for the waste of time: I have now upgraded my Debian lenny > system and, as Marik above has stated, it now does h

[sage-devel] Re: Ubuntu 10.04, JMOL, Java

2010-06-13 Thread ManDay
Hello Paulo, firstly, I've tried both, Sun from the Partner repositories and OpenJDK with IcedTea and none of them works. Currently I'm using Sun's JAVA, that is where I get these exact errors in the console. I've tried both with Firefox - I've even never heard of Chromium (only Google Chrome) Ada

Re: [sage-devel] Call for vote: make top-level identity_matrix and zero_matrix constructors return mutable matrices again

2010-06-13 Thread John Cremona
Yes. John -- To post to this group, send an email to sage-devel@googlegroups.com To unsubscribe from this group, send an email to sage-devel+unsubscr...@googlegroups.com For more options, visit this group at http://groups.google.com/group/sage-devel URL: http://www.sagemath.org

[sage-devel] Re: Call for vote: make top-level identity_matrix and zero_matrix constructors return mutable matrices again

2010-06-13 Thread Georg S. Weber
Yes. Cheers, Georg -- To post to this group, send an email to sage-devel@googlegroups.com To unsubscribe from this group, send an email to sage-devel+unsubscr...@googlegroups.com For more options, visit this group at http://groups.google.com/group/sage-devel URL: http://www.sagemath.org

Re: [sage-devel] Call for vote: make top-level identity_matrix and zero_matrix constructors return mutable matrices again

2010-06-13 Thread William Stein
On Saturday, June 12, 2010, Jason Grout wrote: > On 6/12/10 6:22 PM, Jason Grout wrote: > > > 3. It breaks consistency with the 4 M's, which all return mutable > matrices from the top-level identity matrix constructor. > > > Correction: Maple identity matrices are immutable.  However, Magma, > Ma

[sage-devel] Re: release of NZMATH 1.0 (system for number theory)

2010-06-13 Thread William Stein
On Tue, Jun 8, 2010 at 6:55 AM, Alexander R. Povolotsky wrote: > Hi, > > http://groups.google.com/group/sci.math.symbolic/browse_thread/thread/eed8d297c7c37ca7/b49f8fccb5ca2aaf?hl=en#b49f8fccb5ca2aaf > Mathematica/WolframAlpha and  Derive 6.10 > could handle well the below identity which I came ac

Re: [sage-devel] Re: release of NZMATH 1.0 (system for number theory)

2010-06-13 Thread Mike Hansen
On Sun, Jun 13, 2010 at 4:37 PM, William Stein wrote: > Here's what you can do in Sage (or Maxima): > Unfortunately, just doing > > sage: var('n') > n > sage: sum((4/(8*n+1)-2/(8*n+4)-1/(8*n+5)-1/(16*n+12)-1/(16*n+14)), n, 0,oo) > > in sage leads to: > > TypeError: unable to make sense of Maxima e

[sage-devel] 90% doctest coverage update: 14 June 2010

2010-06-13 Thread Minh Nguyen
Hi folks, In a recent thread [1] on sage-notebook, it was suggested that files under the component sage/server need not contribute to the total doctest coverage. Taking a cue from that, today's coverage update [2] contains good news. I have blacklisted everything under sage/server in generating

[sage-devel] Re: 90% doctest coverage update: 14 June 2010

2010-06-13 Thread Minh Nguyen
Hi folks, On Mon, Jun 14, 2010 at 2:15 PM, Minh Nguyen wrote: > full coverage in order to meet the 90% coverage goal. Now, the number > of strategic modules is down to 140. My little search program has just completed its search. The updated strategic list now consists of 130 modules. -- Reg