Hi David, I've changed the site.mk and recompiled. Deleted the old install in the /usr/local/tpp directory and reinstalled withy make install. Restarted everything but still have the same issue.
Still goes to http://tpp/cgi-bin/tpp_gui.pl after entering guest username and password. I've tried some of the other cgi-bin programs in place of tpp_gui.pl http://localhost:10401/tpp/cgi-bin/XXXXX and they all run and give somewhat of the expected output given no files, except for http://localhost:10401/tpp/cgi-bin/tpp_gui_config.pl Internal Server Error The server encountered an internal error or misconfiguration and was unable to complete your request. Please contact the server administrator at [no address given] to inform them of the time this error occurred, and the actions you performed just before this error. More information about this error may be available in the server error log. [Tue Apr 16 13:08:10.934308 2024] [cgid:error] [pid 841488:tid 140546230744960] (8)Exec format error: AH01241: exec of '/usr/local/tpp/cgi-bin/tpp_gui_config.pl' failed [Tue Apr 16 13:08:10.934745 2024] [cgid:error] [pid 841395:tid 140546200757824] [client ::1:38680] End of script output before headers: tpp_gui_config.pl On Tuesday, April 16, 2024 at 11:02:17 AM UTC+10 David Shteynberg wrote: > Hi Robert, > > I think I see the problem. TPP_BASEURL and TPP_DATAURL should be > relative, no start with '/', try changing your site.mk to : > > INSTALL_DIR = /usr/local/tpp > TPP_DATADIR = /data > TPP_BASEURL = tpp > TPP_DATAURL = tpp/data > TPP_PORT = 10401 > > Then you will need to make all and make install from scratch. The easiest > way is to rename the previous build directory. > > Cheers! > -David > > > > > > On Mon, Apr 15, 2024 at 5:50 PM Robert Willows <rwill...@gmail.com> wrote: > >> Hi David, >> >> The site.mk file is: >> INSTALL_DIR = /usr/local/tpp >> TPP_DATADIR = /data >> TPP_BASEURL = /tpp >> TPP_DATAURL = /tpp/data >> TPP_PORT = 10401 >> >> The output from http://localhost:10401/tpp/cgi-bin/check_env.pl is >> HTTP_ACCEPT = >> text/html,application/xhtml+xml,application/xml;q=0.9,image/avif,image/webp,image/apng,*/*;q=0.8,application/signed-exchange;v=b3;q=0.7 >> HTTP_SEC_CH_UA_PLATFORM = "Linux" >> REQUEST_URI = /tpp/cgi-bin/check_env.pl >> HTTP_SEC_FETCH_MODE = navigate >> PATH = >> /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/snap/bin >> SCRIPT_FILENAME = /usr/local/tpp/cgi-bin/check_env.pl >> SERVER_SOFTWARE = Apache/2.4.52 (Ubuntu) >> WEBSERVER_ROOT = /usr/local/tpp >> SERVER_NAME = localhost >> CONTEXT_PREFIX = //tpp/cgi-bin >> REMOTE_ADDR = ::1 >> SCRIPT_URI = http://localhost:10401/tpp/cgi-bin/check_env.pl >> TPP_DATADIR = /data >> HTTP_CONNECTION = keep-alive >> HTTP_SEC_CH_UA = "Google Chrome";v="123", "Not:A-Brand";v="8", >> "Chromium";v="123" >> HTTP_SEC_FETCH_USER = ?1 >> REQUEST_METHOD = GET >> SCRIPT_NAME = /tpp/cgi-bin/check_env.pl >> SEQ2MS_SOURCE_URL = _SEQ2MS_SOURCE_URL_ >> SCRIPT_URL = /tpp/cgi-bin/check_env.pl >> HTTP_ACCEPT_ENCODING = gzip, deflate, br, zstd >> SERVER_SIGNATURE =Apache/2.4.52 (Ubuntu) Server at localhost Port 10401 >> HTTP_USER_AGENT = Mozilla/5.0 (X11; Linux x86_64) AppleWebKit/537.36 >> (KHTML, like Gecko) Chrome/123.0.0.0 Safari/537.36 >> REMOTE_PORT = 49404 >> TPP_BASEURL = //tpp >> TPP_DATAURL = //tpp/data >> USERPROFILE = /usr/local/tpp >> GATEWAY_INTERFACE = CGI/1.1 >> HTTP_HOST = localhost:10401 >> CONTEXT_DOCUMENT_ROOT = /usr/local/tpp/cgi-bin >> HTTP_ACCEPT_LANGUAGE = en-GB,en-US;q=0.9,en;q=0.8 >> PERL5LIB = /usr/local/tpp/lib/perl >> DOCUMENT_ROOT = /var/www/html >> REQUEST_SCHEME = http >> SEQ2MS_DEFAULT_MODEL = _SEQ2MS_DEFAULT_MODEL_ >> QUERY_STRING = >> SERVER_ADMIN = [no address given] >> HTTP_SEC_FETCH_SITE = none >> WEBSERVER_TMP = /tmp >> SERVER_PROTOCOL = HTTP/1.1 >> HTTP_UPGRADE_INSECURE_REQUESTS = 1 >> HTTP_SEC_FETCH_DEST = document >> SERVER_PORT = 10401 >> SERVER_ADDR = ::1 >> SSRCALC = /usr/local/tpp/conf >> HTTP_SEC_CH_UA_MOBILE = ?0 >> TPP_HOME = /usr/local/tpp >> >> >> >> >> On Tuesday, April 16, 2024 at 12:01:17 AM UTC+10 David Shteynberg wrote: >> >> Hi Robert, >> >> Thanks for trying to install and use TPP on Ubuntu. It seems the >> webserver is somewhat misconfigured for tpp on your system. Can you share >> the site.mk file that you are using for this build as this file allows >> to control the PATHs and URLS used by TPP? >> >> Thanks! >> -David >> >> >> On Mon, Apr 15, 2024, 1:08 AM Robert Willows <rwill...@gmail.com> wrote: >> >> >> I just finished building and installing TPP 7.0 under Ubuntu. All appears >> well until I go to http://localhost:10401/tpp/cgi-bin/tpp_gui.pl >> >> The login appears: >> ISB/SPC Trans Proteomic Pipeline :: >> ..... >> TPP v7.0.0 Arafel, Build 202404151216-exported (Linux-x86_64) >> >> But after entering guest as username and password the pages goes to: >> http://tpp/cgi-bin/tpp_gui.pl >> and >> This site can’t be reached >> >> Check if there is a typo in tpp. >> DNS_PROBE_FINISHED_NXDOMAIN >> >> Apache error logs are empty and access log is: >> 127.0.1.1:80 ::1 - - [15/Apr/2024:17:47:01 +1000] "GET /tpp/cgi-bin/ >> tpp_gui.pl HTTP/1.1" 200 1076 "-" "Mozilla/5.0 (X11; Linux x86_64) >> AppleWebKit/537.36 (KHTML, like Gecko) Chrome/123.0.0.0 Safari/537.36" >> 127.0.1.1:80 ::1 - - [15/Apr/2024:17:47:53 +1000] "-" 408 0 "-" "-" >> >> Any help or incites as I feel I've exhausted possibilities. >> >> >> >> >> >> >> >> >> >> >> TPP v7.0.0 Arafel, Build 202404151216-exported (Linux-x86_64) >> >> -- >> You received this message because you are subscribed to the Google Groups >> "spctools-discuss" group. >> To unsubscribe from this group and stop receiving emails from it, send an >> email to spctools-discu...@googlegroups.com. >> To view this discussion on the web visit >> https://groups.google.com/d/msgid/spctools-discuss/efaa2e37-fa8a-482a-aeda-4bb044a6b5ean%40googlegroups.com >> >> <https://groups.google.com/d/msgid/spctools-discuss/efaa2e37-fa8a-482a-aeda-4bb044a6b5ean%40googlegroups.com?utm_medium=email&utm_source=footer> >> . >> >> -- >> You received this message because you are subscribed to the Google Groups >> "spctools-discuss" group. >> To unsubscribe from this group and stop receiving emails from it, send an >> email to spctools-discu...@googlegroups.com. >> > To view this discussion on the web visit >> https://groups.google.com/d/msgid/spctools-discuss/9f412926-4391-4995-9896-70b992563cc7n%40googlegroups.com >> >> <https://groups.google.com/d/msgid/spctools-discuss/9f412926-4391-4995-9896-70b992563cc7n%40googlegroups.com?utm_medium=email&utm_source=footer> >> . >> > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. 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