Hi,

I use the latest stable version for mac available on the neo4j homepage (V1.2). 
And no, I didn't delete anything.

Regards,

Andi


Am 12.01.2011 um 22:52 schrieb Michael Hunger:

> Hi Andi,
> 
> what version of neo4j are you running against? The latest 1.2 or sth else?
> 
> And did you delete any of the files of the database?
> 
> Thanks a lot
> 
> Michael
> 
> Am 12.01.2011 um 21:10 schrieb Andreas Bauer:
> 
>> Hi,
>> 
>> ok, I did that and now I get this stack trace
>> 
>> 12.01.2011 21:04:57 
>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog doInternalRecovery
>> INFO: Non clean shutdown detected on log [cep/nioneo_logical.log.1]. 
>> Recovery started ...
>> 12.01.2011 21:05:01 
>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog doInternalRecovery
>> INFO: Non clean shutdown detected on log [cep/lucene/lucene.log.1]. Recovery 
>> started ...
>> 12.01.2011 21:05:01 
>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog doInternalRecovery
>> INFO: Non clean shutdown detected on log [cep/lucene-fulltext/lucene.log.1]. 
>> Recovery started ...
>> 12.01.2011 21:05:01 
>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog doInternalRecovery
>> INFO: Non clean shutdown detected on log 
>> [/Users/buki/Documents/workspace/Pimstr/cep/index/lucene.log.1]. Recovery 
>> started ...
>> org.neo4j.graphdb.TransactionFailureException: Could not create data source 
>> lucene-index[lucene-index]
>>      at 
>> org.neo4j.kernel.impl.transaction.TxModule.registerDataSource(TxModule.java:182)
>>      at 
>> org.neo4j.index.impl.lucene.LuceneIndexProvider.load(LuceneIndexProvider.java:110)
>>      at 
>> org.neo4j.index.impl.lucene.LuceneIndexProvider.init(LuceneIndexProvider.java:94)
>>      at 
>> org.neo4j.kernel.KernelExtension$KernelData.initAll(KernelExtension.java:153)
>>      at 
>> org.neo4j.kernel.EmbeddedGraphDbImpl$2.init(EmbeddedGraphDbImpl.java:160)
>>      at org.neo4j.kernel.GraphDbInstance.start(GraphDbInstance.java:155)
>>      at 
>> org.neo4j.kernel.EmbeddedGraphDbImpl.<init>(EmbeddedGraphDbImpl.java:168)
>>      at 
>> org.neo4j.kernel.EmbeddedGraphDatabase.<init>(EmbeddedGraphDatabase.java:81)
>>      at 
>> org.neo4j.kernel.EmbeddedGraphDatabase.<init>(EmbeddedGraphDatabase.java:65)
>>      at 
>> nu.buki.neo4j.SocialNetworkService.<init>(SocialNetworkService.java:46)
>>      at 
>> nu.buki.neo4j.SocialNetworkService.main(SocialNetworkService.java:325)
>> Caused by: java.lang.reflect.InvocationTargetException
>>      at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
>>      at 
>> sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39)
>>      at 
>> sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27)
>>      at java.lang.reflect.Constructor.newInstance(Constructor.java:513)
>>      at 
>> org.neo4j.kernel.impl.transaction.XaDataSourceManager.create(XaDataSourceManager.java:74)
>>      at 
>> org.neo4j.kernel.impl.transaction.TxModule.registerDataSource(TxModule.java:176)
>>      ... 10 more
>> Caused by: java.lang.NullPointerException
>>      at 
>> org.neo4j.index.impl.lucene.LuceneDataSource.findDocument(LuceneDataSource.java:602)
>>      at 
>> org.neo4j.index.impl.lucene.CommitContext.getDocument(CommitContext.java:71)
>>      at 
>> org.neo4j.index.impl.lucene.LuceneCommand$AddRelationshipCommand.perform(LuceneCommand.java:212)
>>      at 
>> org.neo4j.index.impl.lucene.LuceneTransaction.doCommit(LuceneTransaction.java:231)
>>      at 
>> org.neo4j.kernel.impl.transaction.xaframework.XaTransaction.commit(XaTransaction.java:319)
>>      at 
>> org.neo4j.kernel.impl.transaction.xaframework.XaResourceManager.injectTwoPhaseCommit(XaResourceManager.java:380)
>>      at 
>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog.applyTwoPhaseCommitEntry(XaLogicalLog.java:577)
>>      at 
>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog.applyEntry(XaLogicalLog.java:469)
>>      at 
>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog.doInternalRecovery(XaLogicalLog.java:804)
>>      at 
>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog.open(XaLogicalLog.java:274)
>>      at 
>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog.open(XaLogicalLog.java:197)
>>      at 
>> org.neo4j.kernel.impl.transaction.xaframework.XaContainer.openLogicalLog(XaContainer.java:98)
>>      at 
>> org.neo4j.index.impl.lucene.LuceneDataSource.<init>(LuceneDataSource.java:207)
>>      ... 16 more
>> 12.01.2011 21:05:01 org.neo4j.kernel.impl.transaction.TxManager init
>> INFO: Unresolved transactions found, recovery started ...
>> Exception in thread "main" org.neo4j.graphdb.TransactionFailureException: No 
>> mapping found for branchId[0x162374]
>>      at 
>> org.neo4j.kernel.impl.transaction.XaDataSourceManager.getXaResource(XaDataSourceManager.java:186)
>>      at 
>> org.neo4j.kernel.impl.transaction.TxManager.getXaResource(TxManager.java:935)
>>      at 
>> org.neo4j.kernel.impl.transaction.TxManager.buildRecoveryInfo(TxManager.java:416)
>>      at 
>> org.neo4j.kernel.impl.transaction.TxManager.recover(TxManager.java:257)
>>      at org.neo4j.kernel.impl.transaction.TxManager.init(TxManager.java:181)
>>      at org.neo4j.kernel.impl.transaction.TxModule.start(TxModule.java:85)
>>      at org.neo4j.kernel.GraphDbInstance.start(GraphDbInstance.java:157)
>>      at 
>> org.neo4j.kernel.EmbeddedGraphDbImpl.<init>(EmbeddedGraphDbImpl.java:168)
>>      at 
>> org.neo4j.kernel.EmbeddedGraphDatabase.<init>(EmbeddedGraphDatabase.java:81)
>>      at 
>> org.neo4j.kernel.EmbeddedGraphDatabase.<init>(EmbeddedGraphDatabase.java:65)
>>      at 
>> nu.buki.diss.cep.data.neo4j.SocialNetworkService.<init>(SocialNetworkService.java:46)
>>      at 
>> nu.buki.diss.cep.data.neo4j.SocialNetworkService.main(SocialNetworkService.java:325)
>> 
>> any ideas?
>> 
>> Thanks,
>> 
>> Andi
>> 
>> Am 12.01.2011 um 20:49 schrieb Michael Hunger:
>> 
>>> I rather meant your program.
>>> 
>>> Just have it start up, and shutdown() the EmbeddedGraphDatabaseService 
>>> cleanly.
>>> 
>>> Afterwards try to use neoclipse.
>>> 
>>> Cheers
>>> 
>>> Michael
>>> 
>>> Am 12.01.2011 um 20:21 schrieb Andreas Bauer:
>>> 
>>>> Hi,
>>>> 
>>>> I let neoclipse do its work. After the messages mentioned below, only
>>>> 
>>>> checking service ...
>>>> starting neo4j
>>>> checking service ...
>>>> starting neo4j
>>>> checking service ...
>>>> starting neo4j
>>>> checking service ...
>>>> 
>>>> appears, interrupted by the message "The neo service is not available"; 
>>>> and after I clicked "ok" "The database seem to be in use. Please make sure 
>>>> it is not in use  or change to another dtabase location." is shown.
>>>> 
>>>> The size of the db is quite small (at the moment), 
>>>> neostore.propertystore.db is 946kb and neostore.nodestore.db 45kb
>>>> 
>>>> Cheers,
>>>> 
>>>> Andi
>>>> 
>>>> 
>>>> Am 12.01.2011 um 20:10 schrieb Michael Hunger:
>>>> 
>>>>> Hi Andi,
>>>>> 
>>>>> That just shows that the recovery of the transaction started. Does it 
>>>>> also say that it finishes the recovery after a while?
>>>>> You should allow it to end the recovery and then do a clear shutdown of 
>>>>> the database.
>>>>> 
>>>>> If you connect to the db with neoclipse it shouldn't pose any problem.
>>>>> 
>>>>> How big is the dataset that you've stored in the graph?
>>>>> 
>>>>> Thanks
>>>>> 
>>>>> Michael
>>>>> 
>>>>> Am 12.01.2011 um 20:05 schrieb Andreas Bauer:
>>>>> 
>>>>>> Hi,
>>>>>> 
>>>>>> I get the following messages, when I start from the command line. As I 
>>>>>> supposed the problem is due to the random stop of my program, when I 
>>>>>> debug. 
>>>>>> I mean when I debug, I just click the stop button in Eclipse. This seems 
>>>>>> to cause the problem. But how do I work around this? 
>>>>>> 
>>>>>> 12.01.2011 19:55:50 
>>>>>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog 
>>>>>> doInternalRecovery
>>>>>> INFO: Non clean shutdown detected on log [../nioneo_logical.log.1]. 
>>>>>> Recovery started ...
>>>>>> 12.01.2011 19:55:50 
>>>>>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog 
>>>>>> doInternalRecovery
>>>>>> INFO: Non clean shutdown detected on log [../lucene/lucene.log.1]. 
>>>>>> Recovery started ...
>>>>>> 12.01.2011 19:55:50 
>>>>>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog 
>>>>>> doInternalRecovery
>>>>>> INFO: Non clean shutdown detected on log 
>>>>>> [../lucene-fulltext/lucene.log.1]. Recovery started ...
>>>>>> 12.01.2011 19:55:51 org.neo4j.kernel.impl.transaction.TxManager init
>>>>>> INFO: Unresolved transactions found, recovery started ...
>>>>>> 
>>>>>> Cheers,
>>>>>> 
>>>>>> Andi
>>>>>> 
>>>>>> Am 12.01.2011 um 13:32 schrieb Michael Hunger:
>>>>>> 
>>>>>>> Hi Andi,
>>>>>>> 
>>>>>>> as the database reruns all not synced transaction on startup after a 
>>>>>>> startup and clear shutdown all transaction that should be accounted for 
>>>>>>> should be applied and all others discarded.
>>>>>>> 
>>>>>>> So an new EmbeddedGraphDatabase( path ).shutdown() should clean it up 
>>>>>>> for you (or starting and stopping the server).
>>>>>>> 
>>>>>>> Please don't delete any of the files otherwise you risk corrupting your 
>>>>>>> database.
>>>>>>> 
>>>>>>> Would you please provide the error message that you get from neoclipse? 
>>>>>>> (And the StackTrace if possible).
>>>>>>> 
>>>>>>> Hope that helps, if not, let us know.
>>>>>>> 
>>>>>>> Thanks
>>>>>>> 
>>>>>>> Michael
>>>>>>> 
>>>>>>> Am 11.01.2011 um 05:48 schrieb Andreas Bauer:
>>>>>>> 
>>>>>>>> Hi,
>>>>>>>> 
>>>>>>>> I recently asked why I can't open my database in neoclipse.
>>>>>>>> 
>>>>>>>> After checking my logs I found out that there was an error occurring 
>>>>>>>> in the thread that writes to the database, which apparently leaves the 
>>>>>>>> database in an open stte.
>>>>>>>> 
>>>>>>>> My question is now, what do I have to do to get the database back into 
>>>>>>>> a "finished" state when this happens, so I can open it in neoclipse. 
>>>>>>>> Do I have to delete the *.active files or alter some other files?
>>>>>>>> 
>>>>>>>> Cheers,
>>>>>>>> 
>>>>>>>> Andi
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