Hi, the stack trace below wasn't generated by neoclipse, but by neo4j, when I tried to run the shutdown() method.
Regarding the hint build neo4j from source. Up to now I'm still struggling with getting neoclipse run from source code on my Mac ( I'm just dealing with the 32bit 64bit issue. http://www.eclipse.org/swt/faq.php#cocoa64launch, which makes me quite upset, as it additionally wastes lots of time.) So I can't say, if that helped... Cheers, Andi Am 12.01.2011 um 23:26 schrieb Andreas Bauer: > Hi, > > I use the latest stable version for mac available on the neo4j homepage > (V1.2). And no, I didn't delete anything. > > Regards, > > Andi > > > Am 12.01.2011 um 22:52 schrieb Michael Hunger: > >> Hi Andi, >> >> what version of neo4j are you running against? The latest 1.2 or sth else? >> >> And did you delete any of the files of the database? >> >> Thanks a lot >> >> Michael >> >> Am 12.01.2011 um 21:10 schrieb Andreas Bauer: >> >>> Hi, >>> >>> ok, I did that and now I get this stack trace >>> >>> 12.01.2011 21:04:57 >>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog >>> doInternalRecovery >>> INFO: Non clean shutdown detected on log [cep/nioneo_logical.log.1]. >>> Recovery started ... >>> 12.01.2011 21:05:01 >>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog >>> doInternalRecovery >>> INFO: Non clean shutdown detected on log [cep/lucene/lucene.log.1]. >>> Recovery started ... >>> 12.01.2011 21:05:01 >>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog >>> doInternalRecovery >>> INFO: Non clean shutdown detected on log >>> [cep/lucene-fulltext/lucene.log.1]. Recovery started ... >>> 12.01.2011 21:05:01 >>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog >>> doInternalRecovery >>> INFO: Non clean shutdown detected on log >>> [/Users/buki/Documents/workspace/Pimstr/cep/index/lucene.log.1]. Recovery >>> started ... >>> org.neo4j.graphdb.TransactionFailureException: Could not create data source >>> lucene-index[lucene-index] >>> at >>> org.neo4j.kernel.impl.transaction.TxModule.registerDataSource(TxModule.java:182) >>> at >>> org.neo4j.index.impl.lucene.LuceneIndexProvider.load(LuceneIndexProvider.java:110) >>> at >>> org.neo4j.index.impl.lucene.LuceneIndexProvider.init(LuceneIndexProvider.java:94) >>> at >>> org.neo4j.kernel.KernelExtension$KernelData.initAll(KernelExtension.java:153) >>> at >>> org.neo4j.kernel.EmbeddedGraphDbImpl$2.init(EmbeddedGraphDbImpl.java:160) >>> at org.neo4j.kernel.GraphDbInstance.start(GraphDbInstance.java:155) >>> at >>> org.neo4j.kernel.EmbeddedGraphDbImpl.<init>(EmbeddedGraphDbImpl.java:168) >>> at >>> org.neo4j.kernel.EmbeddedGraphDatabase.<init>(EmbeddedGraphDatabase.java:81) >>> at >>> org.neo4j.kernel.EmbeddedGraphDatabase.<init>(EmbeddedGraphDatabase.java:65) >>> at >>> nu.buki.neo4j.SocialNetworkService.<init>(SocialNetworkService.java:46) >>> at >>> nu.buki.neo4j.SocialNetworkService.main(SocialNetworkService.java:325) >>> Caused by: java.lang.reflect.InvocationTargetException >>> at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) >>> at >>> sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) >>> at >>> sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) >>> at java.lang.reflect.Constructor.newInstance(Constructor.java:513) >>> at >>> org.neo4j.kernel.impl.transaction.XaDataSourceManager.create(XaDataSourceManager.java:74) >>> at >>> org.neo4j.kernel.impl.transaction.TxModule.registerDataSource(TxModule.java:176) >>> ... 10 more >>> Caused by: java.lang.NullPointerException >>> at >>> org.neo4j.index.impl.lucene.LuceneDataSource.findDocument(LuceneDataSource.java:602) >>> at >>> org.neo4j.index.impl.lucene.CommitContext.getDocument(CommitContext.java:71) >>> at >>> org.neo4j.index.impl.lucene.LuceneCommand$AddRelationshipCommand.perform(LuceneCommand.java:212) >>> at >>> org.neo4j.index.impl.lucene.LuceneTransaction.doCommit(LuceneTransaction.java:231) >>> at >>> org.neo4j.kernel.impl.transaction.xaframework.XaTransaction.commit(XaTransaction.java:319) >>> at >>> org.neo4j.kernel.impl.transaction.xaframework.XaResourceManager.injectTwoPhaseCommit(XaResourceManager.java:380) >>> at >>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog.applyTwoPhaseCommitEntry(XaLogicalLog.java:577) >>> at >>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog.applyEntry(XaLogicalLog.java:469) >>> at >>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog.doInternalRecovery(XaLogicalLog.java:804) >>> at >>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog.open(XaLogicalLog.java:274) >>> at >>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog.open(XaLogicalLog.java:197) >>> at >>> org.neo4j.kernel.impl.transaction.xaframework.XaContainer.openLogicalLog(XaContainer.java:98) >>> at >>> org.neo4j.index.impl.lucene.LuceneDataSource.<init>(LuceneDataSource.java:207) >>> ... 16 more >>> 12.01.2011 21:05:01 org.neo4j.kernel.impl.transaction.TxManager init >>> INFO: Unresolved transactions found, recovery started ... >>> Exception in thread "main" org.neo4j.graphdb.TransactionFailureException: >>> No mapping found for branchId[0x162374] >>> at >>> org.neo4j.kernel.impl.transaction.XaDataSourceManager.getXaResource(XaDataSourceManager.java:186) >>> at >>> org.neo4j.kernel.impl.transaction.TxManager.getXaResource(TxManager.java:935) >>> at >>> org.neo4j.kernel.impl.transaction.TxManager.buildRecoveryInfo(TxManager.java:416) >>> at >>> org.neo4j.kernel.impl.transaction.TxManager.recover(TxManager.java:257) >>> at org.neo4j.kernel.impl.transaction.TxManager.init(TxManager.java:181) >>> at org.neo4j.kernel.impl.transaction.TxModule.start(TxModule.java:85) >>> at org.neo4j.kernel.GraphDbInstance.start(GraphDbInstance.java:157) >>> at >>> org.neo4j.kernel.EmbeddedGraphDbImpl.<init>(EmbeddedGraphDbImpl.java:168) >>> at >>> org.neo4j.kernel.EmbeddedGraphDatabase.<init>(EmbeddedGraphDatabase.java:81) >>> at >>> org.neo4j.kernel.EmbeddedGraphDatabase.<init>(EmbeddedGraphDatabase.java:65) >>> at >>> nu.buki.diss.cep.data.neo4j.SocialNetworkService.<init>(SocialNetworkService.java:46) >>> at >>> nu.buki.diss.cep.data.neo4j.SocialNetworkService.main(SocialNetworkService.java:325) >>> >>> any ideas? >>> >>> Thanks, >>> >>> Andi >>> >>> Am 12.01.2011 um 20:49 schrieb Michael Hunger: >>> >>>> I rather meant your program. >>>> >>>> Just have it start up, and shutdown() the EmbeddedGraphDatabaseService >>>> cleanly. >>>> >>>> Afterwards try to use neoclipse. >>>> >>>> Cheers >>>> >>>> Michael >>>> >>>> Am 12.01.2011 um 20:21 schrieb Andreas Bauer: >>>> >>>>> Hi, >>>>> >>>>> I let neoclipse do its work. After the messages mentioned below, only >>>>> >>>>> checking service ... >>>>> starting neo4j >>>>> checking service ... >>>>> starting neo4j >>>>> checking service ... >>>>> starting neo4j >>>>> checking service ... >>>>> >>>>> appears, interrupted by the message "The neo service is not available"; >>>>> and after I clicked "ok" "The database seem to be in use. Please make >>>>> sure it is not in use or change to another dtabase location." is shown. >>>>> >>>>> The size of the db is quite small (at the moment), >>>>> neostore.propertystore.db is 946kb and neostore.nodestore.db 45kb >>>>> >>>>> Cheers, >>>>> >>>>> Andi >>>>> >>>>> >>>>> Am 12.01.2011 um 20:10 schrieb Michael Hunger: >>>>> >>>>>> Hi Andi, >>>>>> >>>>>> That just shows that the recovery of the transaction started. Does it >>>>>> also say that it finishes the recovery after a while? >>>>>> You should allow it to end the recovery and then do a clear shutdown of >>>>>> the database. >>>>>> >>>>>> If you connect to the db with neoclipse it shouldn't pose any problem. >>>>>> >>>>>> How big is the dataset that you've stored in the graph? >>>>>> >>>>>> Thanks >>>>>> >>>>>> Michael >>>>>> >>>>>> Am 12.01.2011 um 20:05 schrieb Andreas Bauer: >>>>>> >>>>>>> Hi, >>>>>>> >>>>>>> I get the following messages, when I start from the command line. As I >>>>>>> supposed the problem is due to the random stop of my program, when I >>>>>>> debug. >>>>>>> I mean when I debug, I just click the stop button in Eclipse. This >>>>>>> seems to cause the problem. But how do I work around this? >>>>>>> >>>>>>> 12.01.2011 19:55:50 >>>>>>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog >>>>>>> doInternalRecovery >>>>>>> INFO: Non clean shutdown detected on log [../nioneo_logical.log.1]. >>>>>>> Recovery started ... >>>>>>> 12.01.2011 19:55:50 >>>>>>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog >>>>>>> doInternalRecovery >>>>>>> INFO: Non clean shutdown detected on log [../lucene/lucene.log.1]. >>>>>>> Recovery started ... >>>>>>> 12.01.2011 19:55:50 >>>>>>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog >>>>>>> doInternalRecovery >>>>>>> INFO: Non clean shutdown detected on log >>>>>>> [../lucene-fulltext/lucene.log.1]. Recovery started ... >>>>>>> 12.01.2011 19:55:51 org.neo4j.kernel.impl.transaction.TxManager init >>>>>>> INFO: Unresolved transactions found, recovery started ... >>>>>>> >>>>>>> Cheers, >>>>>>> >>>>>>> Andi >>>>>>> >>>>>>> Am 12.01.2011 um 13:32 schrieb Michael Hunger: >>>>>>> >>>>>>>> Hi Andi, >>>>>>>> >>>>>>>> as the database reruns all not synced transaction on startup after a >>>>>>>> startup and clear shutdown all transaction that should be accounted >>>>>>>> for should be applied and all others discarded. >>>>>>>> >>>>>>>> So an new EmbeddedGraphDatabase( path ).shutdown() should clean it up >>>>>>>> for you (or starting and stopping the server). >>>>>>>> >>>>>>>> Please don't delete any of the files otherwise you risk corrupting >>>>>>>> your database. >>>>>>>> >>>>>>>> Would you please provide the error message that you get from >>>>>>>> neoclipse? (And the StackTrace if possible). >>>>>>>> >>>>>>>> Hope that helps, if not, let us know. >>>>>>>> >>>>>>>> Thanks >>>>>>>> >>>>>>>> Michael >>>>>>>> >>>>>>>> Am 11.01.2011 um 05:48 schrieb Andreas Bauer: >>>>>>>> >>>>>>>>> Hi, >>>>>>>>> >>>>>>>>> I recently asked why I can't open my database in neoclipse. >>>>>>>>> >>>>>>>>> After checking my logs I found out that there was an error occurring >>>>>>>>> in the thread that writes to the database, which apparently leaves >>>>>>>>> the database in an open stte. >>>>>>>>> >>>>>>>>> My question is now, what do I have to do to get the database back >>>>>>>>> into a "finished" state when this happens, so I can open it in >>>>>>>>> neoclipse. Do I have to delete the *.active files or alter some other >>>>>>>>> files? >>>>>>>>> >>>>>>>>> Cheers, >>>>>>>>> >>>>>>>>> Andi >>>>>>>>> _______________________________________________ >>>>>>>>> Neo4j mailing list >>>>>>>>> User@lists.neo4j.org >>>>>>>>> https://lists.neo4j.org/mailman/listinfo/user >>>>>>>> >>>>>>>> _______________________________________________ >>>>>>>> Neo4j mailing list >>>>>>>> User@lists.neo4j.org >>>>>>>> https://lists.neo4j.org/mailman/listinfo/user >>>>>>> >>>>>>> _______________________________________________ >>>>>>> Neo4j mailing list >>>>>>> User@lists.neo4j.org >>>>>>> https://lists.neo4j.org/mailman/listinfo/user >>>>>> >>>>>> _______________________________________________ >>>>>> Neo4j mailing list >>>>>> User@lists.neo4j.org >>>>>> https://lists.neo4j.org/mailman/listinfo/user >>>>> >>>>> _______________________________________________ >>>>> Neo4j mailing list >>>>> User@lists.neo4j.org >>>>> https://lists.neo4j.org/mailman/listinfo/user >>>> >>>> _______________________________________________ >>>> Neo4j mailing list >>>> User@lists.neo4j.org >>>> https://lists.neo4j.org/mailman/listinfo/user >>> >>> _______________________________________________ >>> Neo4j mailing list >>> User@lists.neo4j.org >>> https://lists.neo4j.org/mailman/listinfo/user >> >> _______________________________________________ >> Neo4j mailing list >> User@lists.neo4j.org >> https://lists.neo4j.org/mailman/listinfo/user > > _______________________________________________ > Neo4j mailing list > User@lists.neo4j.org > https://lists.neo4j.org/mailman/listinfo/user _______________________________________________ Neo4j mailing list User@lists.neo4j.org https://lists.neo4j.org/mailman/listinfo/user
