Hi, 
I am trying to implement FSL and freesurfer to compute structural adjacency 
matrix. The webpage 
http://www.fmrib.ox.ac.uk/fsl/fdt/fdt_surface.html has been a major help. I 
just have one question.
When I use probtrackx for fiber tracking, I have to seed the cortical ROI's and 
subcortical structres one by one. In this case, how can I create a .label file 
for each cortical and subcortical ROI;s ?

Thanks for your help, 

Madhura


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