I dint think it does, but maybe jean or David can confirm
On Sep 2, 2011, at 1:07 PM, Ritobrato Datta <rida...@mail.med.upenn.edu> wrote: > Actually I have the same question - does the thalamus proper include LGN ? > > ----- Original Message ----- > From: "Douglas N Greve" <gr...@nmr.mgh.harvard.edu> > To: "Tetiana Dadakova" <tetian...@gmail.com> > Cc: freesurfer@nmr.mgh.harvard.edu > Sent: Friday, September 2, 2011 12:28:45 PM > Subject: Re: [Freesurfer] what is thalamus-proper and clusters-table related > question > > I'm not sure about #1, maybe BF can chime in. > > Tetiana Dadakova wrote: >> Dear FS list, >> >> 1. What does a label Thalamus Proper include? Is it the same as thalamus? >> >> 2. After correcting for multiple comparisons, I get a table of >> clusters. I have several questions regarding this table: What do the >> columns Max, CWPLow, and CWPHigh represent? > 1. CWP - cluster-wise pvalue. The pvalue of the cluster corrected for > multiple comparisons > 2. CWPLow - lower 90% confidence limit of CWP based on binomial > distribution > 3. CWPHi - upper 90% confidence limit of CWP based on binomial > distribution > >> Regarding the NVtxs >> column: is it the number of vertexes in cluster? > Yes >> What kind of information can I get from this value? > It is not very informative so don't feel like you have to use it. It is > good for assuring that the software is doing the right thing. >> If two clusters have different areas but the same number of vertexes, does >> it mean something? >> > It means that the area of the component triangles that make up the > vertices is different. > > doug >> Thank you very much for your help and for your time, >> Tanja. >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> > > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > gr...@nmr.mgh.harvard.edu > Phone Number: 617-724-2358 > Fax: 617-726-7422 > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the e-mail > contains patient information, please contact the Partners Compliance HelpLine > at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
