Hi Sarah can you look at the aparc.a2009s.annot in tksurfer and see if it looks right?
Bruce On Tue, 24 Apr 2012, Baum, Sarah H wrote: > Hi, > > Currently it's not doing that. I'm using the aparc.a2009s_rank file that > I've aligned to the anatomy with @SUMA_AlignToExperiment. > > > > > > On 4/24/12 2:45 PM, "Bruce Fischl" <fis...@nmr.mgh.harvard.edu> wrote: > >> Hi Sarah >> >> what parcellation do you mean? Our standard anatomically-based >> parcellatinos will color the same parcels the same color. >> >> cheers >> Bruce >> On Tue, 24 Apr >> 2012, Baum, Sarah H wrote: >> >>> Hi- >>> >>> I'm looking to compare two parcellations (one is a stroke patient with >>> her brain as is, the other is the same subject with the lesion "fixed" >>> run as a separate subject). It would be helpful if the parcellations >>> would color the same area the same color, but currently every single ROI >>> is colored differently than the corresponding parcellation in the other >>> subject's brain. I looked up the color table in the .annot file, and the >>> RGB coordinates listed for each region are exactly the same for each >>> surface volume. Is there any easy way to make the colors the same? >>> >>> If it helps? I use AFNI/SUMA for visualizing data. >>> >>> Thanks in advance, >>> Sarah >>> >>> >>> Sarah H. Baum >>> Ph.D. Candidate, Neuroscience >>> sarah.h.b...@uth.tmc.edu >>> w: 713.500.5089 >>> c: 571.225.7007 >>> >>> _______________________________________________ >>> Freesurfer mailing list >>> Freesurfer@nmr.mgh.harvard.edu >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> >>> >>> >> >> >> The information in this e-mail is intended only for the person to whom it >> is >> addressed. If you believe this e-mail was sent to you in error and the >> e-mail >> contains patient information, please contact the Partners Compliance >> HelpLine at >> http://www.partners.org/complianceline . If the e-mail was sent to you in >> error >> but does not contain patient information, please contact the sender and >> properly >> dispose of the e-mail. >> > > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
