Nicola and Nick, Can you try the tkmedit.bin found here:
ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/misc/linux-centos6_x86_64/ copy it to the freesurfer/tktools directory (the wrapper script 'tkmedit' in the bin dir calls the binary in the tktools dir). I'm hoping the problem you are seeing is the same one that others have seen on Fedora 19 and Ubuntu 13 which is fixed for the upcoming 5.3 release. Nick On Tue, 2013-05-07 at 12:15 -0400, Nicola Toschi wrote: > Hi Nick, hi List, > > I have been having the exact same problem (also posted it on this list) > with every freesurfer version on Opensuse 12.3, and haven't been able to > sort it out. > > Any luck with it? Any pointers would be highly appreciated. > > Thanks in advance, > > Nicola > > On 5/1/2013 4:42 PM, Nick Jones wrote: > > Hi, > > > > I've run into a license problem with the latest version of Freesurfer on > > OpenSuse 12.3. 64 bit. > > > > FREESURFER_HOME: /usr/freesurfer > > Build stamp: freesurfer-Linux-centos6_x86_64-stable-pub-v5.2.0 > > Kernel info: Linux 3.7.10-1.1-desktop x86_64 > > > > When running a test: > > > > /usr/freesurfer>echo $shell > > /bin/tcsh > > > > /usr/freesurfer>source SetUpFreeSurfer.csh > > -------- freesurfer-Linux-centos6_x86_64-stable-pub-v5.2.0 -------- > > Setting up environment for FreeSurfer/FS-FAST (and FSL) > > FREESURFER_HOME /usr/freesurfer > > FSFAST_HOME /usr/freesurfer/fsfast > > FSF_OUTPUT_FORMAT nii.gz > > SUBJECTS_DIR /usr/freesurfer/subjects > > MNI_DIR /usr/freesurfer/mni > > FSL_DIR /usr/fsl > > > > /usr/freesurfer>tkmedit bert orig.mgz > > -------------------------------------------------------------------------- > > ERROR: Invalid FreeSurfer license key found in license file > > /usr/freesurfer/.license > > If you are outside the NMR-Martinos Center, > > go to http://surfer.nmr.mgh.harvard.edu to > > get a valid license file (it's free). > > If you are inside the NMR-Martinos Center, > > make sure to source the standard environment. > > -------------------------------------------------------------------------- > > > > /usr/freesurfer>cat .license > > hotm...@hotmail.com > > 14743 > > *C5.JPynIz8mt > > /usr/freesurfer> > > > > This license file has been obfuscated. > > > > /usr/freesurfer>ll -a .license > > -rw-r--r-- 1 root root 46 Apr 29 09:38 .license > > > > /usr/freesurfer>cat VERSION > > freesurfer-x86_64-unknown-linux-gnu-stable5-20130226 > > > > /usr/freesurfer>zypper targetos > > openSUSE-12.3-x86_64 > > > > /usr/freesurfer>uname -a > > Linux adams 3.7.10-1.1-desktop #1 SMP PREEMPT Thu Feb 28 15:06:29 UTC 2013 > > (82d3f21) x86_64 x86_64 x86_64 GNU/Linux > > > > Name: tcl > > Version: 8.5.12-3.1.3 > > Name: tk > > Version: 8.5.12-3.1.1 > > > > Thanks to anyone who can provide some insight or workaround. I'm also > > curious if anyone knows the reasoning behind using this type of license > > mechanism, as opposed to agreeing to a license prior to downloading, like > > FSL or 3DSlicer? > > > > Nick > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > > The information in this e-mail is intended only for the person to whom it is > > addressed. If you believe this e-mail was sent to you in error and the > > e-mail > > contains patient information, please contact the Partners Compliance > > HelpLine at > > http://www.partners.org/complianceline . If the e-mail was sent to you in > > error > > but does not contain patient information, please contact the sender and > > properly > > dispose of the e-mail. > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
