Someone just pointed out that I posted the wrong file. Here is the
correct one. Copy it to the same folder
https://gate.nmr.mgh.harvard.edu/safelinks/greve/freesurfer_read_surf.m
On 5/13/2020 11:01 PM, Douglas N. Greve wrote:
Download this file
https://gate.nmr.mgh.harvard.edu/safelinks/greve/find_corresponding_center_FSformat.m
and copy it into $FREESURFER_HOME/matlab
and rerun. Let me know if that fixes it.
On 5/13/2020 5:57 PM, Angela Favaro wrote:
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Please find attached the log
Thank you
Angela
Il giorno 13 mag 2020, alle ore 23:35, Douglas N. Greve
<dgr...@mgh.harvard.edu <mailto:dgr...@mgh.harvard.edu>> ha scritto:
Are you running this from recon-all? If so send the recon-all.log.
If from the command line, send the command-line and all terminal output
On 5/13/2020 5:28 PM, Angela Favaro wrote:
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Hi Doug!
yes, it run under version 6!
Please let me know if it is something that can be solved
Thank you
Angela
Il giorno 13 mag 2020, alle ore 23:06, Douglas N. Greve
<dgr...@mgh.harvard.edu <mailto:dgr...@mgh.harvard.edu>> ha scritto:
Does it run under version 6? We are not really supporting lGI
anymore, but maybe we can get it to work
On 5/13/2020 4:24 PM, Angela Favaro wrote:
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Hi all,
I am using the new version of Freesurfer 7.1.0
And I am finding problems in running gyrification analysis.
I have Matlab 2016a (and 2019b) with the toolbox image processing
The error is after the command find_corresponding_center_FSformat
Matlab seems to start, but then the following message appears:
>> Warning: Input argument must be a string.
> In ver (line 41)
In freesurfer_read_surf (line 70)
In find_corresponding_center_FSformat (line 26)
Error using fprintf
Function is not defined for 'struct' inputs.
Error in freesurfer_read_surf (line 70)
fprintf('FREESURFER_READ_SURF [v %s]\n',ver(11:15));
Error in find_corresponding_center_FSformat (line 26)
[mesh_pial.vertices, mesh_pial.faces] = freesurfer_read_surf(pial);
>>
ERROR: find_corresponding_center_FSformat did not complete
successfully!
I tried with both the Matlab version, but the error is the same
Any help is appreciated. Thank you so much
Angela
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