works now, possibly because I ran ./bootstrap...

On Monday, 8 September 2025 at 13:53:54 UTC+2 [email protected] wrote:

> On Ubuntu 24.04.3 LTS, I get
>
> [pillow-11.3.0] WARNING [tarball|download:164]: Invalid checksum; ignoring 
> cached file /home/martin/sage/upstream/pillow-11.3.0.tar.gz 
> [pillow-11.3.0] Attempting to download package pillow-11.3.0.tar.gz from 
> mirrors 
> [pillow-11.3.0] 
> https://github.com/sagemath/sage/releases/download/10.8/pillow-11.3.0.tar.gz 
> [pillow-11.3.0] 
> [xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx] 
> [pillow-11.3.0] ERROR [transfer|run:135]: [Errno socket error] [Errno 404] 
> Not Found: '//
> github.com/sagemath/sage/releases/download/10.8/pillow-11.3.0.tar.gz' 
> [pillow-11.3.0] 
> https://github.com/sagemath/sage/releases/download/10.7/pillow-11.3.0.tar.gz 
> [pillow-11.3.0] 
> [xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx] 
> [pillow-11.3.0] ERROR [transfer|run:135]: [Errno socket error] [Errno 404] 
> Not Found: '//
> github.com/sagemath/sage/releases/download/10.7/pillow-11.3.0.tar.gz' 
> [pillow-11.3.0] 
> https://github.com/sagemath/sage/releases/download/10.6/pillow-11.3.0.tar.gz 
> [pillow-11.3.0] 
> [xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx] 
> [pillow-11.3.0] ERROR [transfer|run:135]: [Errno socket error] [Errno 404] 
> Not Found: '//
> github.com/sagemath/sage/releases/download/10.6/pillow-11.3.0.tar.gz' 
> [pillow-11.3.0] 
> https://mirror.dogado.de/sage/spkg/upstream/pillow/pillow-11.3.0.tar.gz 
> [pillow-11.3.0] 
> [xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx] 
> [pillow-11.3.0] ERROR [transfer|run:135]: [Errno socket error] [Errno 404] 
> Not Found: '//
> mirror.dogado.de/sage/spkg/upstream/pillow/pillow-11.3.0.tar.gz' 
> [pillow-11.3.0] 
> https://ftp.rediris.es/mirror/sagemath/spkg/upstream/pillow/pillow-11.3.0.tar.gz
>
>
> Martin
> On Monday, 8 September 2025 at 06:27:52 UTC+2 John H Palmieri wrote:
>
>> I downloaded the source code from git and built from scratch, so this 
>> .egg directory is new, absolutely not a remnant from a previous build.
>>
>> I also see a lot of doctest failures (this is on OS X):
>>
>> sage-runtests --long --warn-long 30.0 
>> --random-seed=134973894917834549381313972273293781886 src/sage/env.py  # 1 
>> doctest failed
>> sage-runtests --long --warn-long 30.0 
>> --random-seed=134973894917834549381313972273293781886 
>> src/sage/misc/sagedoc.py  # 1 doctest failed
>> sage-runtests --long --warn-long 30.0 
>> --random-seed=134973894917834549381313972273293781886 
>> src/sage/schemes/generic/algebraic_scheme.py  # 1 doctest failed
>> sage-runtests --long --warn-long 30.0 
>> --random-seed=134973894917834549381313972273293781886 
>> src/sage/schemes/curves/affine_curve.py  # 2 doctests failed
>> sage-runtests --long --warn-long 30.0 
>> --random-seed=134973894917834549381313972273293781886 src/sage/plot/plot.py 
>>  # 1 doctest failed
>> sage-runtests --long --warn-long 30.0 
>> --random-seed=134973894917834549381313972273293781886 
>> src/sage/sandpiles/sandpile.py  # 9 doctests failed
>> sage-runtests --long --warn-long 30.0 
>> --random-seed=134973894917834549381313972273293781886 
>> src/sage/doctest/test.py  # 24 doctests failed
>> sage-runtests --long --warn-long 30.0 
>> --random-seed=134973894917834549381313972273293781886 
>> src/sage/tests/cmdline.py  # 8 doctests failed
>> sage-runtests --long --warn-long 30.0 
>> --random-seed=134973894917834549381313972273293781886 
>> src/sage/repl/interpreter.py  # 1 doctest failed
>> sage-runtests --long --warn-long 30.0 
>> --random-seed=134973894917834549381313972273293781886 
>> src/sage/libs/singular/function.pyx  # 2 doctests failed
>> sage-runtests --long --warn-long 30.0 
>> --random-seed=134973894917834549381313972273293781886 
>> src/sage/rings/polynomial/polynomial_singular_interface.py  # 1 doctest 
>> failed
>> sage-runtests --long --warn-long 30.0 
>> --random-seed=134973894917834549381313972273293781886 
>> src/sage/rings/polynomial/multi_polynomial_ideal.py  # 1 doctest failed
>> sage-runtests --long --warn-long 30.0 
>> --random-seed=134973894917834549381313972273293781886 
>> src/sage/geometry/hyperplane_arrangement/arrangement.py  # 1 doctest failed
>> sage-runtests --long --warn-long 30.0 
>> --random-seed=134973894917834549381313972273293781886 
>> src/sage/geometry/hyperplane_arrangement/library.py  # 1 doctest failed
>> sage-runtests --long --warn-long 30.0 
>> --random-seed=134973894917834549381313972273293781886 
>> src/sage/interfaces/singular.py  # 2 doctests failed
>> sage-runtests --long --warn-long 30.0 
>> --random-seed=134973894917834549381313972273293781886 
>> src/sage/interfaces/maxima_lib.py  # 1 doctest failed
>> sage-runtests --long --warn-long 30.0 
>> --random-seed=134973894917834549381313972273293781886 
>> src/sage/interfaces/gap_workspace.py  # 2 doctests failed
>> sage-runtests --long --warn-long 30.0 
>> --random-seed=134973894917834549381313972273293781886 
>> src/doc/en/thematic_tutorials/sandpile.rst  # 6 doctests failed
>>
>> Some are of this form:
>>
>> **********************************************************************
>> File "src/sage/env.py", line 22, in sage.env
>> Failed example:
>>     out = check_output([sys.executable, "-c", cmd], 
>> env=env).decode().strip()   # long time
>> Expected nothing
>> Got:
>>     ninja: warning: Ignoring jobserver: Pipe-based protocol is not 
>> supported! [ --jobserver-fds=3,4 -j -- TEST_FLAGS=--long 
>> TEST_TARGET=testlong]
>> **********************************************************************
>>
>> Others are because the output is printed in a different order, or with 
>> different generators, or similar, than expected, such as:
>>
>> **********************************************************************
>> File "src/sage/schemes/generic/algebraic_scheme.py", line 1200, in 
>> sage.schemes.generic.algebraic_scheme.AlgebraicScheme_subscheme.irreducible_components
>> Failed example:
>>     V.irreducible_components()                                           
>>  # needs sage.libs.singular
>> Expected:
>>     [Closed subscheme of Projective Space of dimension 4 over Rational 
>> Field defined by:
>>        w,
>>      Closed subscheme of Projective Space of dimension 4 over Rational 
>> Field defined by:
>>        x^2 - y^2 - z^2,
>>      Closed subscheme of Projective Space of dimension 4 over Rational 
>> Field defined by:
>>        x^2*z - v^3,
>>      Closed subscheme of Projective Space of dimension 4 over Rational 
>> Field defined by:
>>        w^5 - 2*z^3*v^2]
>> Got:
>>     [Closed subscheme of Projective Space of dimension 4 over Rational 
>> Field defined by:
>>        -w^5 + 2*z^3*v^2,
>>      Closed subscheme of Projective Space of dimension 4 over Rational 
>> Field defined by:
>>        -x^2*z + v^3,
>>      Closed subscheme of Projective Space of dimension 4 over Rational 
>> Field defined by:
>>        -x^2 + y^2 + z^2,
>>      Closed subscheme of Projective Space of dimension 4 over Rational 
>> Field defined by:
>>        w]
>> **********************************************************************
>>
>>
>>
>>
>> On Sunday, September 7, 2025 at 9:20:27 PM UTC-7 [email protected] 
>> wrote:
>>
>>> Same results with make maintainer-clean. 
>>>
>>> El domingo, 7 de septiembre de 2025 a las 22:55:45 UTC+2, Dima Pasechnik 
>>> escribió:
>>>
>>>> for this beta, I'd certainly do "make sagelib-clean sagelib-uninstall" 
>>>> before trying it out
>>>>
>>>>
>>>> AFAIK, .egg files are something deprecated long ago, why would they 
>>>> keep popping up?
>>>>
>>>>
>>>> On September 7, 2025 3:50:30 PM CDT, Enrique Artal <[email protected]> 
>>>> wrote:
>>>>
>>>>> *.egg is not and old artefact, it comes from this build. What I meant 
>>>>> for "classical" is:
>>>>>
>>>>>    - I made an incremental build, not starting from the beginning.
>>>>>    - I used the order make.
>>>>>    - All this process is done as a regular user, not as root, and 
>>>>>    without using sudo
>>>>>
>>>>> The jupyter kernel as a folder sagemath is then installed in 
>>>>> .local/share/jupyter/kernel of the user home. If I run sage -n jupyterlab 
>>>>> with this user, it is OK. If I run from jupyter lab I get the error of 
>>>>> the 
>>>>> previous message. For a personal installation is OK, but I find useful in 
>>>>> general to use sage in a system jupyter installation (which was possible 
>>>>> at 
>>>>> least till 10.8beta0).
>>>>> Enrique.
>>>>>
>>>>> El domingo, 7 de septiembre de 2025 a las 22:39:30 UTC+2, Dima 
>>>>> Pasechnik escribió:
>>>>>
>>>>>> Please note that in this beta the meaning of "classical build" has 
>>>>>> changed, in the sense that sagelib is built with the meson backend (and 
>>>>>> not 
>>>>>> setuptools).
>>>>>>
>>>>>> Thus the discrepancy with classical/meson builds is now merely the 
>>>>>> nature of the build/run environment; the classical one coming from sage 
>>>>>> the 
>>>>>> distro, and the rest (venvs coming from e.g. conda or uv, or just python 
>>>>>> -m 
>>>>>> venv,
>>>>>> or a no-venv, as if you do "pip install" or "python -m build" as 
>>>>>> root, or perhaps running "pip install --user", with the result going 
>>>>>> into 
>>>>>> ~/.local/).
>>>>>>
>>>>>>
>>>>>> Is that *.egg is an old artefact, from previous builds (should be 
>>>>>> clear from its date, as reported by ls -l) ?
>>>>>>
>>>>>> If so, it can be removed and it won't reappear.
>>>>>>
>>>>>>
>>>>>> On September 7, 2025 2:20:24 PM CDT, Enrique Artal <
>>>>>> [email protected]> wrote:
>>>>>>
>>>>>>> I get also sagemath.egg-info. I could build it but jupyter only 
>>>>>>> works with sage -n jupyter(lab). With external jupyter lab I get:
>>>>>>> [I 2025-09-07 21:17:39.870 ServerApp] AsyncIOLoopKernelRestarter: 
>>>>>>> restarting kernel (5/5), new random ports 
>>>>>>> /usr/bin/python3: Error while finding module specification for 
>>>>>>> 'sage.repl.ipython_kernel' (ModuleNotFoundError: No module named 'sage')
>>>>>>> I am using classical build, in case it matters, and I did not start 
>>>>>>> from scratch.
>>>>>>>
>>>>>>> As predicted by Dima, the problems with sagelib have gone.
>>>>>>> Enrique.
>>>>>>>
>>>>>>>
>>>>>>> El domingo, 7 de septiembre de 2025 a las 20:22:54 UTC+2, John H 
>>>>>>> Palmieri escribió:
>>>>>>>
>>>>>>>> After running `./bootstrap` and `./configure`, the git repo is not 
>>>>>>>> clean:
>>>>>>>>
>>>>>>>>
>>>>>>>> % git status
>>>>>>>> On branch develop
>>>>>>>> Your branch is up to date with 'upstream/develop'.
>>>>>>>>
>>>>>>>> Untracked files:
>>>>>>>>   (use "git add <file>..." to include in what will be committed)
>>>>>>>> sagemath.egg-info/
>>>>>>>>
>>>>>>>> nothing added to commit but untracked files present (use "git add" 
>>>>>>>> to track)
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> On Sunday, September 7, 2025 at 8:39:15 AM UTC-7 Volker Braun wrote:
>>>>>>>>
>>>>>>>>> As always, you can get the latest beta version from the "develop" 
>>>>>>>>> git branch. Alternatively, the self-contained source tarball is at 
>>>>>>>>> http://www.sagemath.org/download-latest.html 
>>>>>>>>>
>>>>>>>>> 1f459003e01 (tag: 10.8.beta2, github/develop) Updated SageMath 
>>>>>>>>> version to 10.8.beta2
>>>>>>>>> 287c8b49970 gh-40761: src/sage/plot/plot.py: fix random test 
>>>>>>>>> failure
>>>>>>>>> 153864ba088 gh-40757: various pep8 fixes in groups/
>>>>>>>>> 90d2653d7c1 gh-40753: Handle aliased functions and methods in 
>>>>>>>>> generated documentation
>>>>>>>>> bc7c98a6d96 gh-40749: small cleanup of the file 
>>>>>>>>> splitting_algebra.py
>>>>>>>>> 02dee9fca6f gh-40748: moving the _pseudo_fraction_field method to 
>>>>>>>>> categories
>>>>>>>>> d542c6ac74a gh-40747: fix some wrong syntax
>>>>>>>>> 89d02402cbd gh-40745: pythran's version_requirements.txt
>>>>>>>>> f54f0eff0e9 gh-40743: add type annotations "-> str" in algebras/
>>>>>>>>> 86a06a248d3 gh-40737: Speed up the maxima _commands() list
>>>>>>>>> ab8ee47af5f gh-40736: Clean up symbolic min max doctests
>>>>>>>>> 79623d05bfa gh-40731: Hide spurious stderr output in 
>>>>>>>>> notebook_cmd_test.py
>>>>>>>>> e1a36723c5b gh-40730: fix issue in method delete_vertices for 
>>>>>>>>> bipartite graphs
>>>>>>>>> 95518b8d9b1 gh-40725: some fixes for ruff SIM warnings
>>>>>>>>> 41fbe031ebb gh-40724: finding more deprecated stuff
>>>>>>>>> f1657543215 gh-40723: fix some ruff PERF in rings/
>>>>>>>>> 63c9ba7591a gh-40722: Update pillow
>>>>>>>>> f5f876ac3e2 gh-40720: fix ruff PERF in schemes
>>>>>>>>> 273073b00b8 gh-40719: implement the method "is_left_modular" for 
>>>>>>>>> lattices
>>>>>>>>> 8aed6f7634a gh-40718: Speed up random_element of finite field
>>>>>>>>> 1ad3f20c0c2 gh-40717: Fix enumerating the same cycle twice in 
>>>>>>>>> undirected graph
>>>>>>>>> eb7e296b908 gh-40713: Improve FiniteField_givaroElement
>>>>>>>>> 7a2ef2fa7de gh-40711: remove some deprecations in matrix2
>>>>>>>>> da0856bc51f gh-40710: Allow calling is_perfect() on immutable 
>>>>>>>>> graphs
>>>>>>>>> fbe24d6ccb6 gh-40709: Fix release dist workflow
>>>>>>>>> 1cfd52c0048 gh-40708: make sure _prereq etc are installed in the 
>>>>>>>>> docker images
>>>>>>>>> 581ee828479 gh-40707: src/sage/symbolic/integration/integral.py: 
>>>>>>>>> delete a few giac doctests
>>>>>>>>> be7b46b9d07 gh-40704: Fix one more optional test
>>>>>>>>> ce49ea0b383 gh-40703: trying to get rid of some CommutativeRing
>>>>>>>>> 454957a41bc gh-40696: Add one "long time" annotation
>>>>>>>>> 7b58bd07cfa gh-40694: Fix test failure from #40435
>>>>>>>>> 582f3b57b1a gh-40692: Make update-meson.py script compatible with 
>>>>>>>>> meson 1.9
>>>>>>>>> 7d21cd498a4 gh-40688: check for presense of the patch utility
>>>>>>>>> 0fe4c81736e gh-40685: cython-lint cleanup in modules folder
>>>>>>>>> e9f3727fba9 gh-40677: src/sage/libs/gap: move a few tests to pytest
>>>>>>>>> 5e10ce7ee5f gh-40672: src/sage/doctest/sources.py: add "long time" 
>>>>>>>>> for two tests
>>>>>>>>> 9ba29896518 gh-40666: is_commutative for coxeter3
>>>>>>>>> 65ec4582b56 gh-40650: Add LinBox algorithm for right kernel of 
>>>>>>>>> sparse matrix over the rationals
>>>>>>>>> 5eacee00b73 gh-40648: Replaced all instances of <RingElement> with 
>>>>>>>>> <Element>
>>>>>>>>> 4617f2fa5b8 gh-40638: Method to add multiples of a matrix row to 
>>>>>>>>> another, ending at some column index
>>>>>>>>> 3f9330174a9 gh-40609: Improve shell code formatting in docs
>>>>>>>>> 329257f750d gh-40592: Update `uv.lock`
>>>>>>>>> 690c2f0a746 gh-40586: Revive doc-release
>>>>>>>>> d0ec6636908 gh-40568: fixes in spkg-configure.m4's
>>>>>>>>> 1c99c11a01e gh-40401: Implement Square Roots to FiniteFields 
>>>>>>>>> Category
>>>>>>>>> 9096302c394 gh-40370: Interface for Regina (3-manifold topology 
>>>>>>>>> and normal surface theory)
>>>>>>>>> 59a67bb558b gh-40317: Implement partial integer factorization 
>>>>>>>>> using flint
>>>>>>>>> edb1ce9ad86 gh-40279: Fix RealLiteral to float conversion
>>>>>>>>> d953568245f gh-40273: Avoid PariError on finite field construction
>>>>>>>>> 09f397adb55 gh-39876: Faster implementation of is_invertible() by 
>>>>>>>>> checking full rank
>>>>>>>>> a6c35260a98 gh-39753: move tree generation methods to 
>>>>>>>>> `src/sage/graphs/generators/trees.pyx`
>>>>>>>>> ad2bb305be7 gh-39030: Use meson in sage-the-distro
>>>>>>>>> 7fb3aaf5d74 gh-36773: Raise a power series to a power series
>>>>>>>>> 4cdd703f8b3 (tag: 10.8.beta1) Updated SageMath version to 
>>>>>>>>> 10.8.beta1
>>>>>>>>>
>>>>>>>>

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