Re: [sage-release] Re: Sage 10.4.beta8 released

2024-06-07 Thread Jan Groenewald
Hi

Debian and Ubuntu do not have imagemagick 7 yet, even in Debian Unstable.
https://repology.org/project/imagemagick/versions
https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=929825

Some more info:
https://www.imagemagick.org/script/porting.php#cli
https://github.com/ImageMagick/ImageMagick/discussions/5279

What about a

try:
magic-script ...
except:
convert ...

or detecting the version 6 or 7, or executable name, of imagemagick?

Regards,
Jan




On Fri, 7 Jun 2024 at 10:35, John Cremona  wrote:

>
>
> On Fri, 7 Jun 2024 at 07:33, Dima Pasechnik  wrote:
>
>> On Thu, Jun 6, 2024 at 2:32 AM John H Palmieri 
>> wrote:
>> >
>> > I don't think I've seen this failure before:
>> >
>> > sage -t --long --random-seed=214696321465302976857414484526305325295
>> src/sage/plot/plot3d/tachyon.py
>> > **
>> > File "src/sage/plot/plot3d/tachyon.py", line 126, in
>> sage.plot.plot3d.tachyon
>> > Failed example:
>> > r2 = os.system('convert '+fname_png+' '+fname_ppm)# optional --
>> ImageMagick
>> > Expected nothing
>> > Got:
>> > WARNING: The convert command is deprecated in IMv7, use "magick"
>> > 
>>
>> Can you check that you see this warning when you use standalone
>> "convert" in terminal?
>> If so, that's an ImageMagick's deprecation introduced in a very recent
>> verision of it (in 7.1.1.25 there is no warning, as far as
>> I can tell)
>>
>> I think "magick" command is available for quite a while - perhaps we
>> can just replace our "convert" to "magick" throughout.
>>
>> Dima
>>
>
> On my computer with Ubuntu 22.04.4 LTS and imagemagick installed,
> "convert" works fine but "magick" is not there.
>
> John
>
>
>
>>
>>
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Re: [sage-release] Re: Ubuntu binaries for Sage 8.9?

2020-04-23 Thread Jan Groenewald
On Thu, 23 Apr 2020 at 11:05, Henri Girard  wrote:

> Sagemath-9.0 installed from the package is in 20.04 (soon coming release
> 29-4 maybe), either you wait or you can try to install sage-9.0 from
> binary on the website. I tried few times to installed it but didn't
> succeed.
>
> If you want to try download the binary from sagemath website
> decompressed it and run it (be careful because you can't change the dir
> after having it ran !
>
> Try to run sage in a shell and if you want to use jupyter notebook you
> can make a link
>
> sudo ln -s sage /usr/bin/sage
>

sudo ln -s sage /usr/local/bin/sage

will prevent it interfering with the sage installed from apt.

Regards,
Jan


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Re: [sage-release] Re: Sage 8..8 released

2019-07-03 Thread Jan Groenewald
Hi

On Wed, 3 Jul 2019 at 12:46, Thierry 
wrote:

> On Wed, Jul 03, 2019 at 11:27:47AM +0100, Dima Pasechnik wrote:
> > well, perhaps Debian people can comment. We had a great rush with 8.7
> > to meet a Debian deadline, it's be a pity if it was not really useful.
>
> It was useful: according to [1] buster will ship 8.6, but it is like 8.7
> since they ship a version that is compatible with gap 4.10 and numpy
> 1.16 which were the reasons for the 8.7 rush (see [2]). So the current
> situation is not so bad. But unless they have plans (and workforce) to
> maintain Sage in buster-backports, it will become as obsolete as 7.4 of
> stretch with time.
>

Apologies I mentioned 7.4 earlier, which is of course Debian 9 stretch
not Debian 10 buster. Indeed comments above are correct.
Still, updated binaries are definitely useful to me.

Regards,
Jan



> Ciao,
> Thierry
>
> [1]
> https://packages.debian.org/cgi-bin/search_packages.pl?keywords=sagemath=names=1=all=all
> [2]
> https://groups.google.com/forum/#!msg/sage-devel/ztLmB2xWFig/kWk7LGycCQAJ




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Re: [sage-release] Re: Sage 8..8 released

2019-07-03 Thread Jan Groenewald
Hi

On Wed, 3 Jul 2019 at 11:54, Dima Pasechnik  wrote:

> Well, Debian 10 will be coming with an up to date Sage installable via apt.
> Do we need to duplicate this?
>

Debian 10 Buster has sage 7.4 from their initial freeze about 6 months ago.
It will not be updated again during Buster's lifecycle.

In in institute where we teach sage, lecturers (some are even sage
developers)
often ask for updated versions.

(Also two recent sage releases I could not even build from source on debian
9, did
not have time to debug it, but I could use the binaries. Since that I've
not even tried
to build it again I just add a binary)

Regards,
Jan



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Re: [sage-release] Re: Sage 8..8 released

2019-07-03 Thread Jan Groenewald
Hi

On Tue, 2 Jul 2019 at 21:08, Volker Braun  wrote:

> binaries are now on the way to the mirrors!
>

1. It looks like Debian 9 is missing?

2. Debian 10 "buster" is due for release in 3 days.
There is a Debian 10 buildbot worker at
sagebd10_64s02.aims.ac.za (18046)
Would it be possible to release a sage 8.8 Debian 10 binary?

3. Ubuntu 14.04 is End-of-Life since 30 April (except for paid ext^H^H^H
limited security maintenance).
I have removed the 14.04 buildbot workers, so from sage-8.9 there won't be
Ubuntu 14.04 binaries.

4. I'm thinking of dropping the i386 buildbot workers (debian and ubuntu).
Ubuntu almost dropped
32bit support recently, but after some pushback from the Steam (gaming) and
Wine 32bit (windows
compatibility layer on Linux) they reversed the decision. It will reduce
our 10 virtualised buildbot workers
running on 1 host to 5 only. We very regularly install Linux on fairly old
laptops for students from all over Africa.
We've not seen a 32bit laptop in 2019. Maybe 1 or 2 in 2018 and fewer than
3 in 2017!
I'd be interested in how many 32bit devices show up at
https://wiki.sagemath.org/days102
How many times were 32bit vs 64bit downloaded from the mirrors? Is this
info available?
Thoughts?

Regards,
Jan

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Re: [sage-release] Sage 8.3 released

2018-08-04 Thread Jan Groenewald
Hi


On Fri, 3 Aug 2018 at 13:47, Volker Braun  wrote:

> The "master" git branch has been updated to Sage-8.3. As always, you can
> get the latest beta version from the "develop" git branch. Alternatively,
> the self-contained source tarball is at
> http://www.sagemath.org/download-latest.html
>


Fails to build for me on debian 9 stretch in a qemu-kvm virtual image with
2G RAM.
Openblas log attached.

Regards,
Jan

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openblas-0.2.20.p2.log.xz
Description: application/xz


Re: [sage-release] Sage 8.1 released

2017-12-08 Thread Jan Groenewald
Hi

dochtml failedto build in a 4g ram virtualbox image of Debian 9 with failed
to allocate memory.
passed after running make one more time.

Regards,
Jan


On 8 December 2017 at 02:06, Volker Braun <vbraun.n...@gmail.com> wrote:

> The "master" git branch has been updated to Sage-8.1. As always, you can
> get the latest beta version from the "develop" git branch. Alternatively,
> the self-contained source tarball is at http://www.sagemath.org/downlo
> ad-latest.html
>
> There was no change over 8.1rc4
>
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Re: [sage-release] Re: Sage 7.5.1 released

2017-01-18 Thread Jan Groenewald
Hi

What about Debian testing, stretch, 9? It seems to be missing.

Regards,
Jan

On 18 January 2017 at 22:37, Volker Braun <vbraun.n...@gmail.com> wrote:

> Binaries are now available
>
>
> On Sunday, January 15, 2017 at 5:31:09 PM UTC+1, Volker Braun wrote:
>>
>> Quick fix so we can build binaries. The "master" git branch has been
>> updated to Sage-7.5.1. As always, you can get the latest beta version from
>> the "develop" git branch. Alternatively, the self-contained source tarball
>> is at http://www.sagemath.org/download-latest.html
>>
>> 14216c6 Updated SageMath version to 7.5.1
>> e116eb1 Trac #22175: Sage 7.5 binaries do not build
>> a0ef507 Updated SageMath version to 7.5
>>
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Re: [sage-release] Re: Sage 7.3 released

2016-08-20 Thread Jan Groenewald
Hi

On 20 August 2016 at 19:36, Harald Schilly <harald.schi...@gmail.com> wrote:

> On Sat, Aug 20, 2016 at 4:40 PM, leif <not.rea...@online.de> wrote:
> > Is there demand for sage-7.3-Ubuntu_{14.04,15.10,16.04}-i686.tar.bz2?
> > (After all, Ubuntu stopped "recommending" their 32-bit OS versions even
> > on 64-bit machines.)
> >
>
>
> So, the only thing I can offer are javascript events when you click on
> a download. That doesn't say much, though. Data says:
>
> all for ubuntu, unique events, for the past 3 months:
>
> sage 7.2, 16.04, 64bit, 337 normal + 51 torrent dls
> sage 7.2, 14.04, 64bit, 190 normal + 36 torrent dls
> sage 7.3, 16.04, 64bit, 87 + 15
> sage 7.2, 16.04. 32bit, 76
> ...
> two 7.1s with 37 and 31 dls
> ...
> sage 7.2, 14.04, 32bit, 20
>
> this is incomplete, but it looks like the total demand is somewhere at
> 10% to 15% of the downloads.
>
> and for context, the top download is the OVA. It has 3546 + 828 dls,
> which is about 50% of all downloads overall. and they're followed by
> the ones for OSX.
>
> -- harald
>

0 jan@debian:~$for i in precise trusty; do for j in amd64 i386; do echo $i
$j; python bin/ppastats.py aims sagemath $i $j; done; done
precise amd64
sagemath-upstream-binary6.1.1ubuntu29648
precise i386
trusty amd64
sagemath-upstream-binary7.2~aimsppa17557
sagemath-upstream-binary-full7.2~aimsppa1315
trusty i386
sagemath-upstream-binary7.2~aimsppa1306
sagemath-upstream-binary-full7.2~aimsppa126
0 jan@debian:~$

Note that trusty actually includes trusty vivid wily xenial since I copy
the trusty binary forward in the PPA. I think maybe that is unique IPs so
computer labs could be under represented.

https://blog.launchpad.net/cool-new-stuff/tracking-ppa-download-statistics
https://askubuntu.com/questions/296197/how-to-find-out-the-package-download-count-from-a-ppa

Regards,
Jan




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Re: [sage-release] Re: Sage 7.3 released

2016-08-17 Thread Jan Groenewald
Hi

On 10 August 2016 at 08:09, Jan Groenewald <j...@aims.ac.za> wrote:

> Hi
>
> I'd expected the 32 bit binaries for sage 7.3 ubuntu 14.04, 15.10, 16.04
> to show up here already? Perhaps some transfer fell over?
>
> http://files.sagemath.org/linux/32bit/index.html
>
> It only shows 12.04.
>
>
I am bumping this as I was waiting for the 14.04 32bit binary before
releasing the 32+64bit via the Ubuntu PPA.

Regards,
Jan

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Re: [sage-release] Re: Sage 7.3.beta4 released

2016-06-18 Thread Jan Groenewald
Hi

On 18 June 2016 at 02:53, kcrisman <kcris...@gmail.com> wrote:

> Had to make distclean && make but it had an awful long time setting up
> build directory for gcc (prior stuff did fine) and then after interrupting
> (after like a half hour), the entire gcc pkg log is:
>
> Found local metadata for gcc-4.9.3.p1
>
> Using cached file
> /Users/karl.crisman/Downloads/sage/upstream/gcc-4.9.3.tar.bz2
>
> gcc-4.9.3.p1
>
> 
>
> Setting up build directory for gcc-4.9.3.p1
>
> Traceback (most recent call last):
>
>   File
> "/Users/karl.crisman/Downloads/sage/build/bin/sage-uncompress-spkg", line
> 246, in 
>
> sys.exit(main())
>
>   File
> "/Users/karl.crisman/Downloads/sage/build/bin/sage-uncompress-spkg", line
> 237, in main
>
> archive.extractall(members=archive.names)
>
>   File
> "/Users/karl.crisman/Downloads/sage/build/bin/sage-uncompress-spkg", line
> 129, in extractall
>
> for m in members]
>
>   File
> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/tarfile.py",
> line 1819, in getmember
>
> tarinfo = self._getmember(name)
>
>   File
> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/tarfile.py",
> line 2395, in _getmember
>
> member_name = member.name
>
> gcc-4.9.3.p1] KeyboardInterrupt
>
> [gcc-4.9.3.p1] Error: failed to extract
> /Users/karl.crisman/Downloads/sage/upstream/gcc-4.9.3.tar.bz2]
>
>
> While doing this, I get process like
>
>
> Load Avg: 1.34, 1.55, 1.66  CPU usage: 29.48% user, 2.94% sys, 67.56% idle
>
> 91862  Python   98.1  00:27.40 1/1   015201M+  0B 0B
> 91747
>
>
> This process is sage-uncompress-spkg
>
>
Are you building in parallel make -j x>1 ? Does it work buiding in serial?

Regards,
Jan

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Re: [sage-release] Re: Sage 7.1 released

2016-03-31 Thread Jan Groenewald
Hi

sagemath-upstream-binary-7.1~aimsppa2  for Ubuntu 14.04 trusty is now busy
copying to the stable PPA.
https://launchpad.net/~aims/+archive/ubuntu/sagemath

As soon as it is done I will copy it to vivid, wily, and xenial.

Regards,
Jan



On 24 March 2016 at 09:21, Jan Groenewald <j...@aims.ac.za> wrote:

> Hi
>
> There is now a 7.1 version in the development PPA (
> https://launchpad.net/~aims/+archive/ubuntu/aims-desktop-dev )
> which I will test in the wild (campus) before copying to the stable PPA in
> a week or so.
>
> Regards,
> Jan
>
> On 23 March 2016 at 02:04, Volker Braun <vbraun.n...@gmail.com> wrote:
>
>> The binaries are complete and on their way to the mirrors now.
>>
>>
>> On Sunday, March 20, 2016 at 5:36:59 PM UTC+1, Volker Braun wrote:
>>>
>>> The "master" git branch has been updated to Sage-7.0. As always, you can
>>> get the latest beta version from the "develop" git branch. Alternatively,
>>> the self-contained source tarball is at
>>> http://www.sagemath.org/download-latest.html
>>>
>>> There were no changes relative to 7.1.rc1
>>>
>> --
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>
>
>
> --
>   .~.
>   /V\ Jan Groenewald
>  /( )\www.aims.ac.za
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>



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Re: [sage-release] Re: Sage 7.1 released

2016-03-24 Thread Jan Groenewald
Hi

There is now a 7.1 version in the development PPA (
https://launchpad.net/~aims/+archive/ubuntu/aims-desktop-dev )
which I will test in the wild (campus) before copying to the stable PPA in
a week or so.

Regards,
Jan

On 23 March 2016 at 02:04, Volker Braun <vbraun.n...@gmail.com> wrote:

> The binaries are complete and on their way to the mirrors now.
>
>
> On Sunday, March 20, 2016 at 5:36:59 PM UTC+1, Volker Braun wrote:
>>
>> The "master" git branch has been updated to Sage-7.0. As always, you can
>> get the latest beta version from the "develop" git branch. Alternatively,
>> the self-contained source tarball is at
>> http://www.sagemath.org/download-latest.html
>>
>> There were no changes relative to 7.1.rc1
>>
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[sage-release] Re: recent woes with relocation of SageMath installation directory

2016-02-05 Thread Jan Groenewald
A fixed version (you can run sagemath-upstream-binary without the -full) is
now busy copying from the dev PPA to the stable PPA.

7.0~aimsppa1~qa201602060140061

Regards,
Jan

On 3 February 2016 at 17:46, Jan Groenewald <j...@aims.ac.za> wrote:

> Hi
>
> TL;DR install sagemath-upstream-binary-full for a fix. The error in 6.9 is
> harmless as only one unimportant file is missing.
>
>
>
> The development PPA now has a working sagemath-upstream-binary-full 7.0
> with no error at all.
> https://launchpad.net/~aims/+archive/ubuntu/sagemath-dev
> When it runs the relocate-once.py after install, it takes (quite) a while
> to patch and then prints message:
>
> ...
> patching
> /usr/lib/sagemath/local/lib/python2.7/site-packages/sage/ext/pselect.so
> patching /usr/lib/sagemath/local/lib/libstdc++.so.6.0.20
> * AIMS PPA: relocate-once.py finished running. Ignore above Exception
> ┌┐
> │ SageMath Version 7.0, Release Date: 2016-01-19 │
> │ Type "notebook()" for the browser-based notebook interface.│
> │ Type "help()" for help.│
> └┘
> sage: Exiting Sage (CPU time 0m0.02s, Wall time 0m0.10s).
> Setting up sagemath-upstream-binary-full (7.0~aimsppa1~qa201602031255151)
> ...
> 0 root@muizenberg:~#
>
> Even though there is no exception; I added that warning before putting
> this out. This is because I added one missing file to
> sagemath-binary-upstream ($SAGE_ROOT/builId/make/Makefile). This version
> will be uploaded to the stable PPA in a week or two depending on feedback.
>
> The smaller bandwidth-saving and disk-saving sagemath-upstream-binary 7.0
> (no -full in the name) is also there (basically excluding most of the
> $SAGE_ROOT/src folder), but will still give the error:
>
> OSError: [Errno 2] No such file or directory:
> '/usr/lib/sagemath/src/build/cythonized/sage/structure/list_clone.c'
>
> After that the debian/postinst will then try to run sage once, then stop,
> as not nearly enough paths were patched. Even removing relocate-once.py is
> not enough:
>
> ┌┐
> │ SageMath Version 7.0, Release Date: 2016-01-19 │
> │ Type "notebook()" for the browser-based notebook interface.│
> │ Type "help()" for help.│
> └┘
>
> ERROR:  The Sage installation tree has moved
>
> from
> /mnt/highperf/buildbot/slave/binary_pkg/build/source/SageMath/jc4b6yulaujayb9sr94ia88eourzeqip0oidma
>   to /usr/lib/sagemath
>
> This is not supported, and Sage will not work. To install Sage from a
> binary package:
>
> 1. Open the .tar.bz2 archive (or .dmg on OSX)
>
> 2. Move the SageMath folder/app to where you want it to be. You can
>also rename the directory now.
>
> 3. Start sage for the first time. This will then automatically patch
>paths in binaries.
>
> After starting Sage for the first time you cannot change the
> installation any more. To install Sage elsewhere, start over from the
> binary package. Or recompile Sage from scratch in the new location
> ("make distclean && make")
>
> dpkg: error processing package sagemath-upstream-binary (--configure):
>  subprocess installed post-installation script returned error exit status 1
> Errors were encountered while processing:
>  sagemath-upstream-binary
> E: Sub-process /usr/bin/dpkg returned an error code (1)
> root@alice-laptop:~#
> root@alice-laptop:~# ls /usr/lib/sagemath/
> COPYING.txt  README.txt  VERSION.txt  build  local  relocate-once.py
> sage  src
> root@alice-laptop:~# rm /usr/lib/sagemath/relocate-once.py
> root@alice-laptop:~# sage
> ┌┐
> │ SageMath Version 7.0, Release Date: 2016-01-19 │
> │ Type "notebook()" for the browser-based notebook interface.│
> │ Type "help()" for help.│
> └┘
>
> ERROR:  The Sage installation tree has moved
>
> from
> /mnt/highperf/buildbot/slave/binary_pkg/build/source/SageMath/jc4b6yulaujayb9sr94ia88eourzeqip0oidma
>   to /usr/lib/sagemath
>
> This is not supported, and Sage will not work. To install Sage from a
> binary package:
>
> 1. Open the .tar.bz2 archive (or .dmg on OSX)
>
> 2. Move the SageMath folder/app to where you want it to be. You

Re: [sage-release] Re: recent woes with relocation of SageMath installation directory

2016-02-04 Thread Jan Groenewald
Hi

On 4 February 2016 at 12:20, HG <henri.gir...@gmail.com> wrote:

> Following the ppa sage link, I tried to install sage-7, it works fine.
> Time for patching, but no problem.
> I use two version of sagemath the ppa and developer one (which I compile)
> and after I compile sagemanifolds (which I can't do at the moment with the
> ppa because it's installed system-wide).
> Thanks for this good work
> Henri
>

If you run sagemath-upstream-binary-full it is technically possible to run
sage manifolds. We had this deployed on campus last week. But you have to
reinstall it after every upgrade. It is bad because:

1) you should not compile as root. There is a past bug where compiling some
package would delete a system file [1]
<http://trac.sagemath.org/ticket/9551>. Malicious code could hose or
rootkit your system. We plan in future to have the sage tree owned by a
sagemath user, which will alleviate that (only) if people remember to
change to that user before customizing / adding optional packages and
rebuilding.

2) bad practice since dpkg (or your distro package manager) is supposed to
manage the system files, but it is technically possible.

It will not work with sagemath-upstream-binary (without -full) since the
SAGE_ROOT/src folder is missing and many files you need for rebuilding sage.

I will try to release a 7.0.1 (rather than waiting for 7.1) which also
fixes the smaller sagemath-upstream-binary in the PPAs. Note 7.0 is now in
the stable PPA for 14.04.

Regards,
Jan




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  /V\ Jan Groenewald
 /( )\www.aims.ac.za
 ^^-^^

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Re: [sage-release] Sage 6.10 released

2016-01-11 Thread Jan Groenewald
Hi

Sage 6.10 is now being copied from the development PPA to the stable PPA:

https://launchpad.net/~aims/+archive/ubuntu/sagemath


It is a mutli-binary deb package with two binaries:
sagemath-upstream-binary # src folder stripped out to save space and
bandwidth; does not support optional packages
sagemath-upstream-binary-full


Known issues:

I take it very few people run sagemath-upstream-binary-full but there is a
caveat in this upgrade as we moved a file (relocate-once.py) from
sagemath-upstream-binary-full to sagemath-upstream-binary, which will cause
an apt upgrade to fail complaining about this. There is an easy fix:
install sagemath-upstream-binary-full before sagemath-upstream-binary, it
will either avoid the error or fix it if you already encountered it.

sudo apt-get install sagemath-upstream-binary-full
sudo apt-get install sagemath-upstream-binary

If you only run sagemath-upstream-binary (which should be the usual case)
none of this is relevant.

Regards,
Jan



On 18 December 2015 at 21:18, Volker Braun <vbraun.n...@gmail.com> wrote:

> The "master" git branch has been updated to Sage-6.9. As always, you can
> get the latest beta version from the "develop" git branch. Alternatively,
> the self-contained source tarball is at
> http://www.sagemath.org/download-latest.html
>
> a1b60f2 Updated Sage version to 6.10
> d9b5c45 Trac #19733: Assignment of special methods does not work in Cython
> 10e9cb5 Trac #19712: strongly_regular_graph() crashes when mu=0
> 22584a3 Updated Sage version to 6.10.rc2
>
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 ^^-^^

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Re: [sage-release] Re: SageMath 6.9 PPA

2015-10-16 Thread Jan Groenewald
Hi Eric,

Yes, sagemath-binary-upstream and sagemath-binary-upstream-full is one
package, a "multi-binary" in debian terminology. From now on it will always
be released. They are released together (there is no way to release them
apart).

Regards,
Jan

On 16 October 2015 at 18:08, Eric Gourgoulhon <egourgoul...@gmail.com>
wrote:

> Hi Jan,
>
> By the way, what is the status of the sagemath-upstream-binary-full
> package? Will it be released for Sage 6.9 ?
>
> Best wishes,
>
> Eric.
>
>
> --
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 ^^-^^

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Re: [sage-release] Re: Sage 6.9.rc2 released

2015-10-05 Thread Jan Groenewald
Hi

On 3 October 2015 at 20:49, kcrisman <kcris...@gmail.com> wrote:

>
> If someone can check that the notebook still works properly and so forth
> that would be nice.  Unfortunately due to some kind of firewall I haven't
> been able to pull for a while (the sysadmin will look into this on Monday,
> I think, his first suggestion about proxies didn't work, unfortunately).
>

For future reference, opened port 9418, for the git protocol, which I think
was the issue.

Regards,
Jan


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 ^^-^^

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Re: [sage-release] Re: Ubuntu PPA package and Jupyter notebook

2015-09-30 Thread Jan Groenewald
Hi

So the buildslaves we host did not have libssl-dev installed. This has now
been fixed. From sage 6.9 the debs in the PPA will support SSL, if you do

sudo sage -pip install pyopenssl

(I'm looking into adding a user sagemath and changing all files in
/usr/lib/sagemath to be owned by that user, so the command could change to
su - sagemath -c "sage -pip install pyopenssl"
in future to prevent compiling packages as root)

In the meantime on sagemath-upstream-binary-full 6.8 from the PPA, I think
this will work

sudo -Es
sage -f python
cd /usr/lib/sagemath/
make
sage -pip install pyopenssl

Regards,
Jan

On 23 September 2015 at 19:11, Thierry <sage-googlesu...@lma.metelu.net>
wrote:

> Hi,
>
> sorry to enter the discussion late, i did not know i was involved there (i
> built this binary). As you can see in the source of the builder, Sage is
> built with openssl support (line 36):
>
>
> http://sagebuilder.metelu.net/gitweb/?p=sagebuilder.git;a=blob;f=sage_deps.target;h=b18de8b4d7a2ad49fe2a905d689dc24b63bfe7da;hb=HEAD
>
> So, you do not have to install libssl-dev nor rebuild python2. Instead,
> just install the 'openssl' package and run Sage. Note that SSL is not only
> required to run the notebook with https, but also to install PIP packages
> (with the 'sage -pip install ' command), since the repository is
> fetched via https.
>
> I did ot look at the PPA recently, but if you use this binary, you should
> add openssl as a dependency (probably also recommend or suggest : tk
> texlive imagemagick dvipng libav-tools|ffmpeg openjdk-7-jre
> icedtea-7-plugin runsnakerun linux-tools google-perftools graphviz
> gnuplot).
>
> If you need pyopenssl (a Python interface to openssl, which is not
> required to let Sage work), note that it is not packaged anymore
> (new-style packages), but the latest version is available via pip, so if
> you need it, you just have to do:
>
> sage -pip install pyopenssl
>
> Ciao,
> Thierry
>
>
>
>
> On Wed, Sep 23, 2015 at 06:53:35PM +0200, Henri Girard wrote:
> > Weird ...
> >
> > Le 23/09/2015 18:50, Jan Groenewald a écrit :
> > >Yes, that is the package we use to build the PPA deb.
> > >The latest PPA version is supposed to be the same.
> > >
> > >Regards,
> > >Jan
> > >
> > >On 23 September 2015 at 18:45, Henri Girard
> > ><henri.gir...@gmail.com <mailto:henri.gir...@gmail.com>> wrote:
> > >
> > >Sorry this one (ubuntu)
> > >
> http://www-ftp.lip6.fr/pub/math/sagemath/linux/64bit/Ubuntu_14.04_LTS_sage-6.8-x86_64-Linux.tar.lrz
> > >I don't know if it's the same ?
> > >
> > >
> > >
> > >Le 23/09/2015 18:43, Jan Groenewald a écrit :
> > >>Hi
> > >>
> > >>What is Sage 6.8 LTS?
> > >>
> > >>Regards,
> > >>Jan
> > >>
> > >>On 23 September 2015 at 18:42, Henri Girard
> > >><henri.gir...@gmail.com <mailto:henri.gir...@gmail.com>> wrote:
> > >>
> > >>I noticed something : Your version compile python sage -f
> python
> > >>sage 6.8 LTS failed sage -f python
> > >>Now I will try make and see if it works
> > >>Regards
> > >>    Henri
> > >>
> > >>
> > >>Le 23/09/2015 17:43, Jan Groenewald a écrit :
> > >>>The same working package is now uploading to the stable PPA.
> > >>>It is already in the dev PPA. We will probably next week
> > >>>turn on weekly autouploads to the dev PPA. And then release
> > >>>whenever there is a new sage and it is ready, to the stable
> PPA.
> > >>>
> > >>>Regards,
> > >>>Jan
> > >>>
> > >>>On 23 September 2015 at 17:41, Jan Groenewald
> > >>><j...@aims.ac.za <mailto:j...@aims.ac.za>> wrote:
> > >>>
> > >>>Hi
> > >>>
> > >>>I think that it now works because our latest PPA package
> > >>>includes all the build/bin folder in /usr/lib/sagemath.
> > >>>Then when you have libssl-dev installed and do sudo sage
> > >>>-f python it is installed with ssl. I'm guessing though.
> > >>>
> > >>>Regards,
> > >>>Jan
> > >>>
> > >>>On 23 September 2015 at 17:00, Henri Girard
> >

Re: [sage-release] Re: Ubuntu PPA package and Jupyter notebook

2015-09-23 Thread Jan Groenewald
Yes, that is the package we use to build the PPA deb.
The latest PPA version is supposed to be the same.

Regards,
Jan

On 23 September 2015 at 18:45, Henri Girard <henri.gir...@gmail.com> wrote:

> Sorry this one (ubuntu)
>
> http://www-ftp.lip6.fr/pub/math/sagemath/linux/64bit/Ubuntu_14.04_LTS_sage-6.8-x86_64-Linux.tar.lrz
> I don't know if it's the same ?
>
>
>
> Le 23/09/2015 18:43, Jan Groenewald a écrit :
>
> Hi
>
> What is Sage 6.8 LTS?
>
> Regards,
> Jan
>
> On 23 September 2015 at 18:42, Henri Girard <henri.gir...@gmail.com>
> wrote:
>
>> I noticed something : Your version compile python sage -f python
>> sage 6.8 LTS failed sage -f python
>> Now I will try make and see if it works
>> Regards
>> Henri
>>
>>
>> Le 23/09/2015 17:43, Jan Groenewald a écrit :
>>
>> The same working package is now uploading to the stable PPA. It is
>> already in the dev PPA. We will probably next week turn on weekly
>> autouploads to the dev PPA. And then release whenever there is a new sage
>> and it is ready, to the stable PPA.
>>
>> Regards,
>> Jan
>>
>> On 23 September 2015 at 17:41, Jan Groenewald < <j...@aims.ac.za>
>> j...@aims.ac.za> wrote:
>>
>>> Hi
>>>
>>> I think that it now works because our latest PPA package includes all
>>> the build/bin folder in /usr/lib/sagemath.
>>> Then when you have libssl-dev installed and do sudo sage -f python it is
>>> installed with ssl. I'm guessing though.
>>>
>>> Regards,
>>> Jan
>>>
>>> On 23 September 2015 at 17:00, Henri Girard < <henri.gir...@gmail.com>
>>> henri.gir...@gmail.com> wrote:
>>>
>>>> In fact we must obtain (sagemanifolds and I... maybe more...(I guess
>>>> but i don't want to speak in name of Eric) the following : sage
>>>> --notebook=ipython so we have access to sage kernel.
>>>> With the following link you sent to me it works. Apparently ssl is
>>>> inside or at least it doesn't ask for !
>>>>   I too installed all the libs you mentioned. But no way to get the deb
>>>> working (pity but not dramatic), I have to install it by hand sudo mv sage
>>>> /usr/share/sage and sudo ln -s /usr/share/sage/sage /usr/bin/sage (before
>>>> delete sage in bin sudo rm /usr/bin/sage), but that's not ubuntu original
>>>> installation : /usr/lib/sagemath (but it's helping me when something get
>>>> wrong like at the moment !), so I have two sage installed in different
>>>> location and when there is a problem I connect to the working version.
>>>> Anticipating a little wily seems to have problems with dir path python
>>>> but I might be working properly when ready.
>>>> Anyway thanks for your great job. For me it's not too annoying and I
>>>> don't want to give you more work than necessary, it's a only a whish that
>>>> maybe others can have. I am not qualified enaugh to tell you what's the
>>>> problem with ssl (In my opinion it's more a problem of right or directory
>>>> than ssl as I have put all lib ?)
>>>> Kind regards
>>>> Henri
>>>>
>>>>
>>>>
>>>> Le 23/09/2015 11:42, Jan Groenewald a écrit :
>>>>
>>>> Hi
>>>>
>>>> On 23 September 2015 at 10:40, Henri Girard < <henri.gir...@gmail.com>
>>>> henri.gir...@gmail.com> wrote:
>>>>
>>>>> I just test it, ssl is always lacking
>>>>> But I am not sure this is the reason because libssl-dev is installed.
>>>>> Why not put in deb the sage-6.8 LTS, I installed it and it works
>>>>> (that's just a suggestion, but sorry if it's a bad idea ?)
>>>>> Before I could compile sage but now I got errors that's why I like
>>>>> your deb and it's automatically updated.
>>>>>
>>>>
>>>> I think due to other problems on many platforms the ssl is disabled by
>>>> default in the Sage binaries.  Other sage developers are more qualified to
>>>> discuss that and answer that.
>>>>
>>>> What is the "sage 6.8 LTS"?  Do you mean include something other than
>>>> <http://sagemath.mirror.ac.za/linux/64bit/Ubuntu_14.04_LTS_sage-6.8-x86_64-Linux.tar.lrz>
>>>> http://sagemath.mirror.ac.za/linux/64bit/Ubuntu_14.04_LTS_sage-6.8-x86_64-Linux.tar.lrz
>>>> in the PPA? Or do you mean depend on libssl-dev and include a rebuilt sage
>>

Re: [sage-release] Re: Ubuntu PPA package and Jupyter notebook

2015-09-23 Thread Jan Groenewald
The same working package is now uploading to the stable PPA. It is already
in the dev PPA. We will probably next week turn on weekly autouploads to
the dev PPA. And then release whenever there is a new sage and it is ready,
to the stable PPA.

Regards,
Jan

On 23 September 2015 at 17:41, Jan Groenewald <j...@aims.ac.za> wrote:

> Hi
>
> I think that it now works because our latest PPA package includes all the
> build/bin folder in /usr/lib/sagemath.
> Then when you have libssl-dev installed and do sudo sage -f python it is
> installed with ssl. I'm guessing though.
>
> Regards,
> Jan
>
> On 23 September 2015 at 17:00, Henri Girard <henri.gir...@gmail.com>
> wrote:
>
>> In fact we must obtain (sagemanifolds and I... maybe more...(I guess but
>> i don't want to speak in name of Eric) the following : sage
>> --notebook=ipython so we have access to sage kernel.
>> With the following link you sent to me it works. Apparently ssl is inside
>> or at least it doesn't ask for !
>>   I too installed all the libs you mentioned. But no way to get the deb
>> working (pity but not dramatic), I have to install it by hand sudo mv sage
>> /usr/share/sage and sudo ln -s /usr/share/sage/sage /usr/bin/sage (before
>> delete sage in bin sudo rm /usr/bin/sage), but that's not ubuntu original
>> installation : /usr/lib/sagemath (but it's helping me when something get
>> wrong like at the moment !), so I have two sage installed in different
>> location and when there is a problem I connect to the working version.
>> Anticipating a little wily seems to have problems with dir path python
>> but I might be working properly when ready.
>> Anyway thanks for your great job. For me it's not too annoying and I
>> don't want to give you more work than necessary, it's a only a whish that
>> maybe others can have. I am not qualified enaugh to tell you what's the
>> problem with ssl (In my opinion it's more a problem of right or directory
>> than ssl as I have put all lib ?)
>> Kind regards
>> Henri
>>
>>
>>
>> Le 23/09/2015 11:42, Jan Groenewald a écrit :
>>
>> Hi
>>
>> On 23 September 2015 at 10:40, Henri Girard <henri.gir...@gmail.com>
>> wrote:
>>
>>> I just test it, ssl is always lacking
>>> But I am not sure this is the reason because libssl-dev is installed.
>>> Why not put in deb the sage-6.8 LTS, I installed it and it works (that's
>>> just a suggestion, but sorry if it's a bad idea ?)
>>> Before I could compile sage but now I got errors that's why I like your
>>> deb and it's automatically updated.
>>>
>>
>> I think due to other problems on many platforms the ssl is disabled by
>> default in the Sage binaries.  Other sage developers are more qualified to
>> discuss that and answer that.
>>
>> What is the "sage 6.8 LTS"?  Do you mean include something other than
>> http://sagemath.mirror.ac.za/linux/64bit/Ubuntu_14.04_LTS_sage-6.8-x86_64-Linux.tar.lrz
>> in the PPA? Or do you mean depend on libssl-dev and include a rebuilt sage
>> with pyopenssl in the deb? I coudl then be introducing errors/bugs to the
>> downstream users if I include a rebuilt python with ssl. I want to confirm
>> that it is possible though, with one or two lines, to add SSL capability.
>>
>> Our (AIMS) main use case, by the way, is standalone laptop installs, that
>> can work offline, so we use a per-user installation, not a multi-user
>> server, so the https is irrelevant for us. I'd like to stay close to the
>> upstream with the PPA. We do however have students ssh from a laptop into
>> their own account on a campus desktop to use a notebook on a more powerful
>> machine or just to access their worksheets conveniently from their rooms.
>>
>> Right now we cannot on the -full package do either of
>>
>> sage -i pyopenssl
>> or
>> sage -pip install pyopenssl
>>
>> even though we did
>>
>> sudo apt-get install python-dev libffi-dev libssl-dev libxml2-dev
>> libxslt1-dev
>>
>> Our
>>
>> sage -f python was succcesful though.
>>
>> What exactly are the commands and output of what you are trying to do?
>>
>> Regards,
>> Jan
>>
>>
>> --
>>   .~.
>>   /V\ Jan Groenewald
>>  /( )\www.aims.ac.za
>>  ^^-^^
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>>

[sage-release] SSL

2015-09-23 Thread Jan Groenewald
Hi

I'm not sure. Can we move this thread to sage-devel and ask there?

This was more about getting at least a working PPA out. I will follow on
sage-devel though.

Basic question: What does it take to enable SSL? Do those commands work on
1) source build
2) binary (LTS)
3) PPA

Regards,
Jan

On 23 September 2015 at 18:53, Henri Girard <henri.gir...@gmail.com> wrote:

> You said it could be easy to integrate ssl can you tell me how to do ?
> sage - f python works in your version but while trying to run it, it
> doesn't work and I alway get ssl missing.
> But if you haven't time don't worry I still can use ubuntu version. Just
> to see if it would work and integrate ssl
>
>
>
> Le 23/09/2015 18:43, Jan Groenewald a écrit :
>
> Hi
>
> What is Sage 6.8 LTS?
>
> Regards,
> Jan
>
> On 23 September 2015 at 18:42, Henri Girard <henri.gir...@gmail.com>
> wrote:
>
>> I noticed something : Your version compile python sage -f python
>> sage 6.8 LTS failed sage -f python
>> Now I will try make and see if it works
>> Regards
>> Henri
>>
>>
>> Le 23/09/2015 17:43, Jan Groenewald a écrit :
>>
>> The same working package is now uploading to the stable PPA. It is
>> already in the dev PPA. We will probably next week turn on weekly
>> autouploads to the dev PPA. And then release whenever there is a new sage
>> and it is ready, to the stable PPA.
>>
>> Regards,
>> Jan
>>
>> On 23 September 2015 at 17:41, Jan Groenewald < <j...@aims.ac.za>
>> j...@aims.ac.za> wrote:
>>
>>> Hi
>>>
>>> I think that it now works because our latest PPA package includes all
>>> the build/bin folder in /usr/lib/sagemath.
>>> Then when you have libssl-dev installed and do sudo sage -f python it is
>>> installed with ssl. I'm guessing though.
>>>
>>> Regards,
>>> Jan
>>>
>>> On 23 September 2015 at 17:00, Henri Girard < <henri.gir...@gmail.com>
>>> henri.gir...@gmail.com> wrote:
>>>
>>>> In fact we must obtain (sagemanifolds and I... maybe more...(I guess
>>>> but i don't want to speak in name of Eric) the following : sage
>>>> --notebook=ipython so we have access to sage kernel.
>>>> With the following link you sent to me it works. Apparently ssl is
>>>> inside or at least it doesn't ask for !
>>>>   I too installed all the libs you mentioned. But no way to get the deb
>>>> working (pity but not dramatic), I have to install it by hand sudo mv sage
>>>> /usr/share/sage and sudo ln -s /usr/share/sage/sage /usr/bin/sage (before
>>>> delete sage in bin sudo rm /usr/bin/sage), but that's not ubuntu original
>>>> installation : /usr/lib/sagemath (but it's helping me when something get
>>>> wrong like at the moment !), so I have two sage installed in different
>>>> location and when there is a problem I connect to the working version.
>>>> Anticipating a little wily seems to have problems with dir path python
>>>> but I might be working properly when ready.
>>>> Anyway thanks for your great job. For me it's not too annoying and I
>>>> don't want to give you more work than necessary, it's a only a whish that
>>>> maybe others can have. I am not qualified enaugh to tell you what's the
>>>> problem with ssl (In my opinion it's more a problem of right or directory
>>>> than ssl as I have put all lib ?)
>>>> Kind regards
>>>> Henri
>>>>
>>>>
>>>>
>>>> Le 23/09/2015 11:42, Jan Groenewald a écrit :
>>>>
>>>> Hi
>>>>
>>>> On 23 September 2015 at 10:40, Henri Girard < <henri.gir...@gmail.com>
>>>> henri.gir...@gmail.com> wrote:
>>>>
>>>>> I just test it, ssl is always lacking
>>>>> But I am not sure this is the reason because libssl-dev is installed.
>>>>> Why not put in deb the sage-6.8 LTS, I installed it and it works
>>>>> (that's just a suggestion, but sorry if it's a bad idea ?)
>>>>> Before I could compile sage but now I got errors that's why I like
>>>>> your deb and it's automatically updated.
>>>>>
>>>>
>>>> I think due to other problems on many platforms the ssl is disabled by
>>>> default in the Sage binaries.  Other sage developers are more qualified to
>>>> discuss that and answer that.
>>>>
>>>> What is the "sage 6.8 LTS"?  Do you mean include something other th

Re: [sage-release] Re: Ubuntu PPA package and Jupyter notebook

2015-09-23 Thread Jan Groenewald
Hi

A fixed 6.8 deb is now in the sagemath-dev PPA. I will test today since we
are teaching a Sage class I will notice soon if it is broken, and upload to
the stable PPA.

What is the SSL procedure? Is it

sudo apt-get install libssl-dev
sudo sage -f python

(while this is bad practice: compiling as root and writing over apt-managed
files, we did make the sagemath-upstream-binary-full package to preserve
this and cython functionality. Note the sizes (-full depends on
sagemath-upstream-binary, and adds these folders
https://bitbucket.org/aims_za/sagemath-upstream-binary/src/472bba7ef41379b61e03e216c1bb4a96e1ca604d/sagemath-upstream-binary/debian/sagemath-upstream-binary-full.install.in?at=master=file-view-default
)

- sagemath-upstream-binary-full_6.8~aimsppa13~qa201509221157151_amd64.deb
<https://launchpad.net/%7Eaims/+archive/ubuntu/sagemath-dev/+files/sagemath-upstream-binary-full_6.8%7Eaimsppa13%7Eqa201509221157151_amd64.deb>
(315.0 MiB)
- sagemath-upstream-binary-full_6.8~aimsppa13~qa201509221157151_i386.deb
<https://launchpad.net/%7Eaims/+archive/ubuntu/sagemath-dev/+files/sagemath-upstream-binary-full_6.8%7Eaimsppa13%7Eqa201509221157151_i386.deb>
(295.5 MiB)
- sagemath-upstream-binary_6.8~aimsppa13~qa201509221157151_amd64.deb
<https://launchpad.net/%7Eaims/+archive/ubuntu/sagemath-dev/+files/sagemath-upstream-binary_6.8%7Eaimsppa13%7Eqa201509221157151_amd64.deb>
(498.2 MiB)
- sagemath-upstream-binary_6.8~aimsppa13~qa201509221157151_i386.deb
<https://launchpad.net/%7Eaims/+archive/ubuntu/sagemath-dev/+files/sagemath-upstream-binary_6.8%7Eaimsppa13%7Eqa201509221157151_i386.deb>
(445.9 MiB)
If we (finally) have 32 bit and 64 bit sage 6.8 trimmed and full in the
stable PPA, we will enable weekly automated uploads to the dev PPA, so
you'll want to stop using that.

Regards,
Jan

On 23 September 2015 at 09:10, Henri Girard <henri.gir...@gmail.com> wrote:

> Installing the LTS 6.8 manually solved the problem waiting for AIMS deb
> Le jeudi 10 septembre 2015 22:28:39 UTC+2, Eric Gourgoulhon a écrit :
> > Hi,
> >
> > While testing the Ubuntu package sagemath-upstream-binary-full from AIMS
> PPA (cf. this thread), I've tried to run sage in Jupyter notebook via the
> command
> > sage -n ipython
> > The result is
> >
> > ┌┐
> > │ SageMath Version 6.8, Release Date: 2015-07-26 │
> > │ Type "notebook()" for the browser-based notebook interface.│
> > │ Type "help()" for help.│
> > └┘
> > Please wait while the Sage Notebook server starts...
> >
> > The IPython notebook requires ssl, even if you do not use
> > https. Install the openssl development packages in your system and
> > then rebuild Python (sage -f python).
> >
> > Now, I do have the openssl dev package installed (on the same computer,
> the Jupyter notebook works well with local (i.e. installed manually in user
> home directory) versions of Sage 6.8). If, as suggested, I run
> > sudo sage -f python
> > I got the error message:
> > /usr/lib/sagemath/build/make/pipestatus: ligne 39: sage-spkg : commande
> introuvable
> >
> > Am I missing something ? It would be nice to have the Jupyter notebook
> work in the Ubuntu package.
> >
> > Eric.
>
> --
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 /( )\www.aims.ac.za
 ^^-^^

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Re: [sage-release] Ubuntu PPA package and Jupyter notebook

2015-09-22 Thread Jan Groenewald
Hi Eric

We had a typo in the install file. Now there is a new package here in the
dev PPA.:

https://launchpad.net/~aims/+archive/ubuntu/sagemath-dev/+packages

Regards,
Jan

On 16 September 2015 at 22:49, Eric Gourgoulhon <egourgoul...@gmail.com>
wrote:

> Hi Jan,
>
> I have uninstalled the package and reinstalled it with
>
> sudo apt-get update
> sudo apt-get install sagemath-upstream-binary-full
>
> But the problem is still there: no folder /usr/lib/sagemath/build/bin and
> the same error message after sudo sage -f python2.
>
> Best wishes,
>
> Eric.
>
> Le lundi 14 septembre 2015 12:08:07 UTC+2, pipedream a écrit :
>>
>> Hi Eric,
>>
>> A new -full package with the missing build folders is now uploaded and
>> published on the sagemath-dev PPA.
>>
>> You can turn this PPA on and off by renaming
>> /etc/apt/sources.list.d/aims-sagemath-dev.list.disabled with or without the
>> .disabled.
>>
>> Regards,
>> Jan
>>
>> --
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 ^^-^^

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Re: [sage-release] Ubuntu PPA package and Jupyter notebook

2015-09-14 Thread Jan Groenewald
Hi Eric,

A new -full package with the missing build folders is now uploaded and
published on the sagemath-dev PPA.

You can turn this PPA on and off by renaming
/etc/apt/sources.list.d/aims-sagemath-dev.list.disabled with or without the
.disabled.

Regards,
Jan

On 13 September 2015 at 11:04, Jan Groenewald <j...@aims.ac.za> wrote:

> Hi Eric,
>
> I was mistaken, the daily autobuild is not enabled. We'll push it through
> during this week, probably tomorrow.
>
> Regards,
> Jan
>
> On 13 September 2015 at 10:09, Eric Gourgoulhon <egourgoul...@gmail.com>
> wrote:
>
>> Hi Jan,
>>
>> Le vendredi 11 septembre 2015 10:04:49 UTC+2, pipedream a écrit :
>>>
>>>
>>> But this should go through tonight:
>>>
>>> https://bitbucket.org/aims_za/sagemath-upstream-binary/commits/30a4b479c406c87666857185c855a13514bfefb2
>>>
>>>
>> I've reinstalled the package yesterday, with
>> sudo apt-get update
>> sudo apt-get install sagemath-upstream-binary-full
>> but there is still no /usr/lib/sagemath/build/bin directory and
>> sudo sage -f python2
>> still result in
>> /usr/lib/sagemath/build/make/pipestatus: ligne 39: sage-spkg : commande
>> introuvable
>>
>> Best regards,
>>
>> Eric.
>>
>>
>>
>> --
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>>
>
>
>
> --
>   .~.
>   /V\ Jan Groenewald
>  /( )\www.aims.ac.za
>  ^^-^^
>



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 ^^-^^

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Re: [sage-release] Ubuntu PPA package and Jupyter notebook

2015-09-13 Thread Jan Groenewald
Hi Eric,

I was mistaken, the daily autobuild is not enabled. We'll push it through
during this week, probably tomorrow.

Regards,
Jan

On 13 September 2015 at 10:09, Eric Gourgoulhon <egourgoul...@gmail.com>
wrote:

> Hi Jan,
>
> Le vendredi 11 septembre 2015 10:04:49 UTC+2, pipedream a écrit :
>>
>>
>> But this should go through tonight:
>>
>> https://bitbucket.org/aims_za/sagemath-upstream-binary/commits/30a4b479c406c87666857185c855a13514bfefb2
>>
>>
> I've reinstalled the package yesterday, with
> sudo apt-get update
> sudo apt-get install sagemath-upstream-binary-full
> but there is still no /usr/lib/sagemath/build/bin directory and
> sudo sage -f python2
> still result in
> /usr/lib/sagemath/build/make/pipestatus: ligne 39: sage-spkg : commande
> introuvable
>
> Best regards,
>
> Eric.
>
>
>
> --
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 ^^-^^

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Re: [sage-release] Ubuntu PPA package and Jupyter notebook

2015-09-11 Thread Jan Groenewald
Hi

We will update the package soon. We have an autobuild uploading to the dev
PPA daily, though we plan to change that to weekly soon.

But this should go through tonight:
https://bitbucket.org/aims_za/sagemath-upstream-binary/commits/30a4b479c406c87666857185c855a13514bfefb2

Regards,
Jan

On 11 September 2015 at 09:26, Eric Gourgoulhon <egourgoul...@gmail.com>
wrote:

>
>
> Le vendredi 11 septembre 2015 09:03:42 UTC+2, pipedream a écrit :
>>
>> Hi
>>
>> We seem to be missing something in the full package. Do you have the
>> /usr/lib/sagemath/build/bin folder in your -full installation?
>>
>
> No I don't: the subfolders of  /usr/lib/sagemath/build/ are make and pkgs,
> there is no bin.
>
> Regards,
>
> Eric.
>
>
>> Regards,
>> Jan
>>
>> On 10 September 2015 at 22:28, Eric Gourgoulhon <egourg...@gmail.com>
>> wrote:
>>
>>> Hi,
>>>
>>> While testing the Ubuntu package *sagemath-upstream-binary-full* from
>>> AIMS PPA (cf. this thread
>>> <https://groups.google.com/d/msg/sage-devel/l7-YWzr2lH0/Nxg8lETALQAJ>),
>>> I've tried to run sage in Jupyter notebook via the command
>>> sage -n ipython
>>> The result is
>>>
>>> ┌┐
>>> │ SageMath Version 6.8, Release Date: 2015-07-26 │
>>> │ Type "notebook()" for the browser-based notebook interface.│
>>> │ Type "help()" for help.│
>>> └┘
>>> Please wait while the Sage Notebook server starts...
>>>
>>> The IPython notebook requires ssl, even if you do not use
>>> https. Install the openssl development packages in your system and
>>> then rebuild Python (sage -f python).
>>>
>>> Now, I do have the openssl dev package installed (on the same computer,
>>> the Jupyter notebook works well with local (i.e. installed manually in user
>>> home directory) versions of Sage 6.8). If, as suggested, I run
>>> sudo sage -f python
>>> I got the error message:
>>> /usr/lib/sagemath/build/make/pipestatus: ligne 39: sage-spkg : commande
>>> introuvable
>>>
>>> Am I missing something ? It would be nice to have the Jupyter notebook
>>> work in the Ubuntu package.
>>>
>>> Eric.
>>>
>>>
>>> --
>>> You received this message because you are subscribed to the Google
>>> Groups "sage-release" group.
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>>> an email to sage-release...@googlegroups.com.
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>>>
>>
>>
>>
>> --
>>   .~.
>>   /V\ Jan Groenewald
>>  /( )\www.aims.ac.za
>>  ^^-^^
>>
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Re: [sage-release] Ubuntu PPA package and Jupyter notebook

2015-09-10 Thread Jan Groenewald
Hi Eric

Do you NOT get this error when using a binary from
http://www.sagemath.org/download.html ? Or do you NOT get this error with
from-source builds? When you say "installed manually".

I would like to know about the binaries.

Regards,
Jan



On 10 September 2015 at 22:28, Eric Gourgoulhon <egourgoul...@gmail.com>
wrote:

> Hi,
>
> While testing the Ubuntu package *sagemath-upstream-binary-full* from
> AIMS PPA (cf. this thread
> <https://groups.google.com/d/msg/sage-devel/l7-YWzr2lH0/Nxg8lETALQAJ>),
> I've tried to run sage in Jupyter notebook via the command
> sage -n ipython
> The result is
>
> ┌┐
> │ SageMath Version 6.8, Release Date: 2015-07-26 │
> │ Type "notebook()" for the browser-based notebook interface.│
> │ Type "help()" for help.│
> └┘
> Please wait while the Sage Notebook server starts...
>
> The IPython notebook requires ssl, even if you do not use
> https. Install the openssl development packages in your system and
> then rebuild Python (sage -f python).
>
> Now, I do have the openssl dev package installed (on the same computer,
> the Jupyter notebook works well with local (i.e. installed manually in user
> home directory) versions of Sage 6.8). If, as suggested, I run
> sudo sage -f python
> I got the error message:
> /usr/lib/sagemath/build/make/pipestatus: ligne 39: sage-spkg : commande
> introuvable
>
> Am I missing something ? It would be nice to have the Jupyter notebook
> work in the Ubuntu package.
>
> Eric.
>
>
> --
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Re: [sage-release] 16 binaries of Sage 6.8 for Debian and Ubuntu (32 and 64 bits)

2015-09-07 Thread Jan Groenewald
Hi

It took some time to fix what Launchpad did (dh_strip removed all .so
files) but we now have a new package uploaded at ppa:aims/sagemath-dev.
(6.8~aimsppa11)
Note the "dev" PPA which is new and please help us test that before we copy
it to ppa:aims/sagemath

This is now a "multi-binary" deb package, consisting of a smaller and full
version of sagemath. The smaller version saves bandwidth and disk space,
but it also breaks installing optional packages, which is in any case a bad
idea on a root-owned apt-managed set of folders.

sagemath-upstream-binary
(also the debian package folder is now at
https://bitbucket.org/aims_za/sagemath-upstream-binary; we stripped out the
doc, .git, and other large or unneeded folders)

and

sagemath-upstream-binary-full
(which in addition to the core folders also contains these
https://bitbucket.org/aims_za/sagemath-upstream-binary/src/cf3f7e2dcc94cdbfc4fb7dc7502b68787c305f5c/sagemath-upstream-binary-6.8/debian/sagemath-upstream-binary-full.install.in?at=master
)

There is also again a sage 32bit version which we have not tested at all
yet.

Currently this is all for Ubuntu 14.04 only, with more to follow later.

cc: thanks to Jonathan for getting all that done.

Regards,
Jan




On 28 July 2015 at 15:11, Thierry <sage-googlesu...@lma.metelu.net> wrote:

> Hi,
>
> the compilation of Sage 6.8 went very smoothly on every currently
> supported Debian and Ubuntu versions in both 32 and 64 bits (16 possible
> combinations), for the first time all ptestlong passed without having to
> re-test expect.py manually.
>
> Since recent work of Jan in maintaining new buildbot slaves at AIMS for
> the same configurations, they should not be as useful as before, the
> impatient can still download the binaries here, both in .tar.gz and
> .tar.lrz format:
>
> https://lipn.univ-paris13.fr/~monteil/hebergement/sage/binaries/6.8/
>
> Ciao,
> Thierry
>
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Re: [sage-release] list of supported platforms

2015-08-05 Thread Jan Groenewald
Hi

On 5 August 2015 at 10:20, Samuel Lelièvre samuel.lelie...@gmail.com
wrote:

 Hi sage-release,

 The list of supported platforms at

 http://wiki.sagemath.org/SupportedPlatforms

 needs some tender loving care.

 In particular, shouldn't the fully supported list include
 - OS X 10.10?
 - Ubuntu 15.04?
 - more Debian versions?


Maybe that can be auto generated from waterfall?
http://build.sagemath.org/release/waterfall

Regards,
Jan

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Re: [sage-release] 12 binaries for Debian and Ubuntu (32 and 64 bits)

2015-04-25 Thread Jan Groenewald
Hi

The PPA for 14.04 64bit is now updated.

I am currently in Tanzania (severe unannounced power outages) and working
via South Africa (severe announced power outages) but will, when I am back
in 2 weeks, start work on adding 32bit and other versions of Ubuntu to the
PPA.

In the meantime I will use Thierry's binaries (thanks!), but in a few
months I will also add buildslaves for all those airchitectures, as well as
automate the PPA uploads. This is fairly safe unless the actual runtime
dependencies or file structure of sage changes.

Regards,
Jan

On 17 April 2015 at 01:25, Thierry sage-googlesu...@lma.metelu.net wrote:

 Hi,

 my desktop is finishing to build binaries for all supported Debian and
 Ubuntu versions in both 32 and 64 bits, you can get them here:

 https://lipn.univ-paris13.fr/~monteil/hebergement/sage/binaries/6.6/

 The last one (Ubuntu 14.10, 64 bits) is finishing its ptestlong and should
 appear within one hour or so.

 Thanks to Harald's hint, the lrz images are twice smaller than the gziped
 ones (they take longer to (un)compress though).

 Ciao,
 Thierry



 On 27/03/2015 22:23, Thierry wrote:
  Hi,
 
  there is currenlty no 32-bits binary for 6.5 on the mirrors, and only a
  single one for 6.4.1 that runs on an unmaintained Ubuntu release (13.04).
  However, those are still needed for quite a lot of users i met (not only
  users with old computers but also those that run i686 kernel on a 64 bits
  material, this was the default choice for downloads on ubuntu website
  until quite recently).
 
  Hence i wrote a buildchain (in bash, sorry) to automatically spawn, boot,
  upgrade a qemu VM for each maintained Ubuntu/Debian release (precise,
  trusty, utopic (and vivid soon) / wheezy, jessie, sid), and build Sage on
  it.
 
  To ensure wide compatibility, the qemu-lated processor is Pentium III
  (Katmai) and the builds use the #17806 patch to allow SAGE_FAT_BINARY to
  work.
 
  http://lipn.univ-paris13.fr/~monteil/hebergement/sage/binaries/
 
  Please do whatever could be useful with that (try it, mirror it, PPA
  it,...).
 
  The buildchain should be able to build all 64 bits as well, but Sage 6.6
  is at the corner so i will wait for its release and for feedback about
 the
  current builds.
 
  Ciao,
  Thierry
 
 


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Re: [sage-release] Re: [sage-devel] Re: tons of builds for 32 bits

2015-03-28 Thread Jan Groenewald
Hi Volker

Does that allow scheduling sequential builds on multiple virtual (OK,
containers) buildslaves with different IPs and hostnames on one physical
host?

Regards,
Jan

On 28 March 2015 at 11:04, Volker Braun vbraun.n...@gmail.com wrote:

 Thats easy, Buildbot has locks to control scheduling, I've already set it
 up so that it only build/tests one sage at any given time on a buildslave.


 On Saturday, March 28, 2015 at 8:31:39 AM UTC+1, Jan Groenewald wrote:

 Hi Volker

 If buildbot could schedule sequential runs instead of parallel, I could
 supply many LXC buildslave instances for Debian/Ubuntu.

 32bit and 64bit
 Ubuntu 12.04, 14.04, and latest.
 Debian stable, testing, unstable.

 Regards,
 Jan

 On 28 March 2015 at 01:17, Volker Braun vbrau...@gmail.com wrote:

 With Sage-6.6 there will also be the usual 32-bit builds again.

 Our buildbot makes the binaries, and it would be great if we could
 increase coverage. Buildbot also has support for libvirt to build/run
 virtual machines, though we currently don't make use of it. Another
 possibility would be to run buildbot slaves in docker and have buildbot
 schedule them so that only one is active at a time.


 On Friday, March 27, 2015 at 10:23:30 PM UTC+1, Thierry
 (sage-googlesucks@xxx) wrote:

 Hi,

 there is currenlty no 32-bits binary for 6.5 on the mirrors, and only a
 single one for 6.4.1 that runs on an unmaintained Ubuntu release
 (13.04).
 However, those are still needed for quite a lot of users i met (not
 only
 users with old computers but also those that run i686 kernel on a 64
 bits
 material, this was the default choice for downloads on ubuntu website
 until quite recently).

 Hence i wrote a buildchain (in bash, sorry) to automatically spawn,
 boot,
 upgrade a qemu VM for each maintained Ubuntu/Debian release (precise,
 trusty, utopic (and vivid soon) / wheezy, jessie, sid), and build Sage
 on
 it.

 To ensure wide compatibility, the qemu-lated processor is Pentium III
 (Katmai) and the builds use the #17806 patch to allow SAGE_FAT_BINARY
 to
 work.

 http://lipn.univ-paris13.fr/~monteil/hebergement/sage/binaries/

 Please do whatever could be useful with that (try it, mirror it, PPA
 it,...).

 The buildchain should be able to build all 64 bits as well, but Sage
 6.6
 is at the corner so i will wait for its release and for feedback about
 the
 current builds.

 Ciao,
 Thierry


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[sage-release] Re: [sage-devel] Re: tons of builds for 32 bits

2015-03-28 Thread Jan Groenewald
Hi Volker

If buildbot could schedule sequential runs instead of parallel, I could
supply many LXC buildslave instances for Debian/Ubuntu.

32bit and 64bit
Ubuntu 12.04, 14.04, and latest.
Debian stable, testing, unstable.

Regards,
Jan

On 28 March 2015 at 01:17, Volker Braun vbraun.n...@gmail.com wrote:

 With Sage-6.6 there will also be the usual 32-bit builds again.

 Our buildbot makes the binaries, and it would be great if we could
 increase coverage. Buildbot also has support for libvirt to build/run
 virtual machines, though we currently don't make use of it. Another
 possibility would be to run buildbot slaves in docker and have buildbot
 schedule them so that only one is active at a time.


 On Friday, March 27, 2015 at 10:23:30 PM UTC+1, Thierry
 (sage-googlesucks@xxx) wrote:

 Hi,

 there is currenlty no 32-bits binary for 6.5 on the mirrors, and only a
 single one for 6.4.1 that runs on an unmaintained Ubuntu release (13.04).
 However, those are still needed for quite a lot of users i met (not only
 users with old computers but also those that run i686 kernel on a 64 bits
 material, this was the default choice for downloads on ubuntu website
 until quite recently).

 Hence i wrote a buildchain (in bash, sorry) to automatically spawn, boot,
 upgrade a qemu VM for each maintained Ubuntu/Debian release (precise,
 trusty, utopic (and vivid soon) / wheezy, jessie, sid), and build Sage on
 it.

 To ensure wide compatibility, the qemu-lated processor is Pentium III
 (Katmai) and the builds use the #17806 patch to allow SAGE_FAT_BINARY to
 work.

 http://lipn.univ-paris13.fr/~monteil/hebergement/sage/binaries/

 Please do whatever could be useful with that (try it, mirror it, PPA
 it,...).

 The buildchain should be able to build all 64 bits as well, but Sage 6.6
 is at the corner so i will wait for its release and for feedback about
 the
 current builds.

 Ciao,
 Thierry


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 ^^-^^

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[sage-release] Re: recent trouble with ubuntu package

2014-12-10 Thread Jan Groenewald
Thanks,

I will do some testing (PPA vs buildbot binary vs source).

First I need to reproduce the error, which I cannot. If I run in a notebook

%r
1=1;

or I run with the evaluation dropdown set to R not sage:

1+1;

 both cells compute correctly in the notebook. Also if I run in a terminal,
sage --R then I get a prompte and 1+1; evaluates. Also in the sage terminal
after %r, 1+1; evaluates successfully. All of these also exited without
crashing.

If I try something slightly more, it still seems to work:

 install.packages(test)
Warning in install.packages(test) :
  'lib = /usr/lib/sagemath/local/lib/R/library' is not writable
Would you like to use a personal library instead?  (y/n) y
Would you like to create a personal library
~/R/x86_64-unknown-linux-gnu-library/3.1
to install packages into?  (y/n) y
--- Please select a CRAN mirror for use in this session ---
Warning message:
package ‘test’ is not available (for R version 3.1.1)


Can anyone else reproduce this?


Regards,
Jan


On 10 December 2014 at 10:12, Vincent Delecroix 20100.delecr...@gmail.com
wrote:

 Dear Jan (cc-ed sage-devel and sage-release),

 It seems that the most recent package for ubuntu break the R
 interface. See the report at:

 http://ask.sagemath.org/question/25189/cannot-allocate-memory/

 Best,
 Vincent




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 ^^-^^

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Re: [sage-release] Re: Sage 6.4 released

2014-11-22 Thread Jan Groenewald
Hi

On 22 November 2014 15:18, Volker Braun vbraun.n...@gmail.com wrote:

 On Saturday, November 22, 2014 1:04:59 PM UTC, pipedream wrote:

 git pull in a sage-6.4.tar.gz unpacked and get all the latest tickets?
 Or how do I test just that ticket. Sory, my git workflow is very basic,
 not very sophisticated yet.


 The ticket is not merged yet, so you'd need to get that specific ticket.
 The easiest way is to put the git-trac script in your path (
 http://www.sagemath.org/doc/developer/git_trac.html) and then git trac
 checkout 17349




It gails for me

0 jan@snapperkob:~/sage-6.4$git trac checkout 17349
Loading ticket #17349...
Checking out Trac #17349 remote branch
u/vbraun/r_fails_with_version__gomp_4_0__not_found - local branch
t/17349/r_fails_with_version__gomp_4_0__not_found...
Traceback (most recent call last):
  File /home/jan/bin/git-trac, line 18, in module
cmdline.launch()
  File /home/jan/git-trac-command/git_trac/cmdline.py, line 204, in launch
app.checkout(args.ticket_or_branch, args.branch_name)
  File /home/jan/git-trac-command/git_trac/app.py, line 98, in checkout
self._checkout_ticket(int(ticket_or_branch), branch_name)
  File /home/jan/git-trac-command/git_trac/app.py, line 122, in
_checkout_ticket
self.repo.checkout_new_branch(ticket.branch, branch)
  File /home/jan/git-trac-command/git_trac/git_repository.py, line 123,
in checkout_new_branch
self.git.fetch('trac', remote)
  File /home/jan/git-trac-command/git_trac/git_interface.py, line 341, in
meth
return self.execute(git_cmd, *args, **kwds)
  File /home/jan/git-trac-command/git_trac/git_interface.py, line 328, in
execute
popen_stderr=subprocess.PIPE)
  File /home/jan/git-trac-command/git_trac/git_interface.py, line 263, in
_run
raise GitError(result)
git_trac.git_error.GitError: git returned with non-zero exit code (128)
when executing git fetch trac
u/vbraun/r_fails_with_version__gomp_4_0__not_found
STDERR: fatal: 'trac' does not appear to be a git repository
STDERR: fatal: Could not read from remote repository.
STDERR:
STDERR: Please make sure you have the correct access rights
STDERR: and the repository exists.
1 jan@snapperkob:~/sage-6.4$





 Also, how can I build just the R package and not make all of Sage and
 components?


 sage -f r


Thank  you.




 (Also, might it be the quickest way to get 6.4 in a binary is to add
 libatlas3-base and build, and add a dependency? Then fix this for 6.5?)


 An even easier workaround is probably

 export R_CONFIGURE=--with-atlas=no --with-blas=no



 and then build Sage.


Shall I test this tomorrow, and if it works, you can build a binary on
snapperkob through buildbot?

Regards,
Jan



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 /( )\www.aims.ac.za
 ^^-^^

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Re: [sage-release] Re: Sage 6.4 released

2014-11-22 Thread Jan Groenewald
Hi



On 22 November 2014 15:35, Volker Braun vbraun.n...@gmail.com wrote:

 On Saturday, November 22, 2014 1:29:20 PM UTC, pipedream wrote:

 STDERR: fatal: 'trac' does not appear to be a git repository


 You need to once run git trac config to set up the trac remote.


Thanks. This is now building with

R is now configured for x86_64-unknown-linux-gnu

  Source directory:  .
  Installation directory:/home/jan/sage-6.4/local

  C compiler:gcc -std=gnu99  -g -O2
  Fortran 77 compiler:   gfortran  -g -O2

  C++ compiler:  g++
  C++ 11 compiler:   g++  -std=c++11
  Fortran 90/95 compiler:gfortran -g -O2
  Obj-C compiler:

  Interfaces supported:  X11, tcltk
  External libraries:readline, BLAS(generic), LAPACK(generic), ICU
  Additional capabilities:   PNG, JPEG, NLS, cairo
  Options enabled:   shared R library, R profiling

  Recommended packages:  yes




 export R_CONFIGURE=--with-atlas=no --with-blas=no

 Shall I test this tomorrow, and if it works, you can build a binary on
 snapperkob through buildbot?


 I'm pretty sure this works, the question is what goes wrong when using
 ATLAS...



OK. If above ticket builds, can it be used to make a binary on snapperkob
via buildbot which I can use for the PPA for 6.4?

Regards,
Jan


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 /( )\www.aims.ac.za
 ^^-^^

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Re: [sage-release] Re: Sage 6.4 released

2014-11-22 Thread Jan Groenewald
Hi

That built OK:
uccessfully installed r-3.1.1.p0
Deleting temporary build directory
/home/jan/sage-6.4/local/var/tmp/sage/build/r-3.1.1.p0
Finished installing r-3.1.1.p0.spkg

(from sage -f r)

Regards,
Jan

On 22 November 2014 15:40, Jan Groenewald j...@aims.ac.za wrote:

 Hi



 On 22 November 2014 15:35, Volker Braun vbraun.n...@gmail.com wrote:

 On Saturday, November 22, 2014 1:29:20 PM UTC, pipedream wrote:

 STDERR: fatal: 'trac' does not appear to be a git repository


 You need to once run git trac config to set up the trac remote.


 Thanks. This is now building with

 R is now configured for x86_64-unknown-linux-gnu

   Source directory:  .
   Installation directory:/home/jan/sage-6.4/local

   C compiler:gcc -std=gnu99  -g -O2
   Fortran 77 compiler:   gfortran  -g -O2

   C++ compiler:  g++
   C++ 11 compiler:   g++  -std=c++11
   Fortran 90/95 compiler:gfortran -g -O2
   Obj-C compiler:

   Interfaces supported:  X11, tcltk
   External libraries:readline, BLAS(generic), LAPACK(generic), ICU
   Additional capabilities:   PNG, JPEG, NLS, cairo
   Options enabled:   shared R library, R profiling

   Recommended packages:  yes




 export R_CONFIGURE=--with-atlas=no --with-blas=no

 Shall I test this tomorrow, and if it works, you can build a binary on
 snapperkob through buildbot?


 I'm pretty sure this works, the question is what goes wrong when using
 ATLAS...



 OK. If above ticket builds, can it be used to make a binary on snapperkob
 via buildbot which I can use for the PPA for 6.4?

 Regards,
 Jan


 --
   .~.
   /V\ Jan Groenewald
  /( )\www.aims.ac.za
  ^^-^^




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 ^^-^^

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Re: [sage-release] Re: Sage 6.4 released

2014-11-20 Thread Jan Groenewald
Hi

I rebuilt sage from a cleanly unpacked source tree on Ubuntu 14.04, and it
still did not fail on R


export SAGE_INSTALL_GCC=yes
make
...
Successfully installed r-3.1.1.p0

I'd like to assist running any tests to get this fixed.

Regards,
Jan


On 19 November 2014 09:09, Jan Groenewald j...@aims.ac.za wrote:

 Hi

 I did

 $SAGE_INSTALL_GCC=yes make

 in the already built source tree, and it seemed to rebuild the relevant
 parts without failing. Is that enough or should I try it in a cleanly
 unpacked source tree?

 Regards,
 Jan


 On 18 November 2014 15:56, Jan Groenewald j...@aims.ac.za wrote:

 Will do.

 Regards,
 Jan


 On 18 November 2014 15:29, Volker Braun vbraun.n...@gmail.com wrote:

 Try building with SAGE_INSTALL_GCC=yes, I'm pretty sure this is causing
 the problem.

 On Tuesday, November 18, 2014 11:56:03 AM UTC, pipedream wrote:

 Hi

 This is strange, the error I see is:

 /home/buildbot/build/sage/snapperkob/sage_git/build/local/var/tmp/sage/build/r-3.1.1.p0/src/bin/exec/R:
  /usr/lib/x86_64-linux-gnu/libgomp.so.1: version `GOMP_4.0' not found 
 (required by 
 /home/buildbot/build/sage/snapperkob/sage_git/build/local/var/tmp/sage/build/r-3.1.1.p0/src/lib/libR.so)

 I have the same version of libgomp1 (4.8.2-19ubuntu1) installed on my
 14.04 64bit desktop as that builder (snapperkob) and yet sage 6.4 built
 succesfully on my desktop yesterday:

 Successfully installed r-3.1.1.p0

 Regards,
 Jan





 On 18 November 2014 13:22, Volker Braun vbrau...@gmail.com wrote:

 The build failed because R insists on using openmp for some reason,
 but the openmp libraries are not installed (or of the wrong version):

 http://build.sagedev.org/release/builders/Zbin%20%
 20fast%20AIMS%20snapperkob%20%28Ubuntu%2014.04%20x86_64%29%
 20binary/builds/1/steps/compile_2/logs/r-project


 On Tuesday, November 18, 2014 5:00:26 AM UTC, pipedream wrote:

 Hi

 I do not see the 14.04 Ubuntu binaries here.
 http://boxen.math.washington.edu/home/sagemath/sage-mirror/l
 inux/64bit/index.html

 Are they not automatically generated?

 Regards,
 Jan

 On 17 November 2014 17:17, kcrisman kcri...@gmail.com wrote:

 The release notes have a broken link in them:


 http://boxen.math.washington.edu/home/release/sage-6.4/tickets.html


 Yes, that has been reported before...

 By the way, Jeroen, I think I finished all the changes I'm going to
 for now.  Long-term, it would be fun to do some database thingie to
 standardize names of a few very frequent contributors who have them in a
 couple different formats.


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 ^^-^^

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Re: [sage-release] Sage 6.4 on Ubuntu 14.04 LTS (ipython notebook and ssl)

2014-11-19 Thread Jan Groenewald
Hi

libssl 0.9.8 is not default, but is available:
0 jan@muizenberg:/var/autofs/misc/home/jan$apt-cache policy libssl0.9.8
libssl0.9.8:
  Installed: (none)
  Candidate: 0.9.8o-7ubuntu3.2.14.04.1
  Version table:
 0.9.8o-7ubuntu3.2.14.04.1 0
500 http://za.archive.ubuntu.com/ubuntu/ trusty-updates/universe
amd64 Packages
500 http://security.ubuntu.com/ubuntu/ trusty-security/universe
amd64 Packages
 0.9.8o-7ubuntu3.1 0
500 http://za.archive.ubuntu.com/ubuntu/ trusty/universe amd64
Packages
0 jan@muizenberg:/var/autofs/misc/home/jan$

However I see the current 6.3 depends on libssl 1.0.0

0 jan@muizenberg:/var/autofs/misc/home/jan$apt-cache depends
sagemath-upstream-binary |grep ssl
  Depends: libssl1.0.0
  Recommends: openssl
0 jan@muizenberg:/var/autofs/misc/home/jan$

I can change that if needs be when 6.4 gets added to the PPA. I can also
make libssl-dev a Depends (or Recommends).

Regards,
Jan



On 19 November 2014 15:31, Eric Gourgoulhon egourgoul...@gmail.com wrote:

 Hi,

 For installing Sage 6.4 from sources on Ubuntu 14.04, I suggest that the
 package *libssl-dev* is added to the prerequisites listed in
 http://www.sagemath.org/doc/installation/source.html#prerequisites
 and in SAGE_ROOT/README.txt
 Indeed, without it, the command ./sage --notebook=ipython terminates by
 ImportError: No module named _ssl
 With libssl-dev, the ipython notebook works well.

 For a binary install, I've tried
 sage-6.4-x86_64-Linux-Ubuntu_10.04_x86_64.tar since the Ubuntu 14.04 LTS is
 not on the mirrors yet (I understand from a previous message on this list
 that there is some built problem for 14.04 LTS). Then the command ./sage
 --notebook=ipython terminates by
 ImportError: libssl.so.0.9.8: cannot open shared object file: No such file
 or directory
 Indeed, on Ubuntu 14.04, the libssl.so version is 1.0.0, not 0.9.8. I
 guess this issue will be resolved as soon as Ubuntu 14.04 LTS binaries are
 available.

 Two unrelated remarks:

 - On http://sagemath.org/, clicking on Changelog below Download 6.4
 leads to a broken page

 - On http://sagemath.org/download-linux.html, there is no longer the
 mirror in Paris 6 University.

 Best wishes,

 Eric.

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Re: [sage-release] Re: Sage 6.4 released

2014-11-18 Thread Jan Groenewald
Hi

This is strange, the error I see is:

/home/buildbot/build/sage/snapperkob/sage_git/build/local/var/tmp/sage/build/r-3.1.1.p0/src/bin/exec/R:
/usr/lib/x86_64-linux-gnu/libgomp.so.1: version `GOMP_4.0' not found
(required by 
/home/buildbot/build/sage/snapperkob/sage_git/build/local/var/tmp/sage/build/r-3.1.1.p0/src/lib/libR.so)

I have the same version of libgomp1 (4.8.2-19ubuntu1) installed on my 14.04
64bit desktop as that builder (snapperkob) and yet sage 6.4 built
succesfully on my desktop yesterday:

Successfully installed r-3.1.1.p0

Regards,
Jan





On 18 November 2014 13:22, Volker Braun vbraun.n...@gmail.com wrote:

 The build failed because R insists on using openmp for some reason, but
 the openmp libraries are not installed (or of the wrong version):


 http://build.sagedev.org/release/builders/Zbin%20%20fast%20AIMS%20snapperkob%20%28Ubuntu%2014.04%20x86_64%29%20binary/builds/1/steps/compile_2/logs/r-project


 On Tuesday, November 18, 2014 5:00:26 AM UTC, pipedream wrote:

 Hi

 I do not see the 14.04 Ubuntu binaries here.
 http://boxen.math.washington.edu/home/sagemath/sage-mirror/
 linux/64bit/index.html

 Are they not automatically generated?

 Regards,
 Jan

 On 17 November 2014 17:17, kcrisman kcri...@gmail.com wrote:

 The release notes have a broken link in them:

  http://boxen.math.washington.edu/home/release/sage-6.4/tick
 ets.html


 Yes, that has been reported before...

 By the way, Jeroen, I think I finished all the changes I'm going to for
 now.  Long-term, it would be fun to do some database thingie to standardize
 names of a few very frequent contributors who have them in a couple
 different formats.

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Re: [sage-release] Re: Sage 6.4 released

2014-11-18 Thread Jan Groenewald
Will do.

Regards,
Jan


On 18 November 2014 15:29, Volker Braun vbraun.n...@gmail.com wrote:

 Try building with SAGE_INSTALL_GCC=yes, I'm pretty sure this is causing
 the problem.

 On Tuesday, November 18, 2014 11:56:03 AM UTC, pipedream wrote:

 Hi

 This is strange, the error I see is:

 /home/buildbot/build/sage/snapperkob/sage_git/build/local/var/tmp/sage/build/r-3.1.1.p0/src/bin/exec/R:
  /usr/lib/x86_64-linux-gnu/libgomp.so.1: version `GOMP_4.0' not found 
 (required by 
 /home/buildbot/build/sage/snapperkob/sage_git/build/local/var/tmp/sage/build/r-3.1.1.p0/src/lib/libR.so)

 I have the same version of libgomp1 (4.8.2-19ubuntu1) installed on my
 14.04 64bit desktop as that builder (snapperkob) and yet sage 6.4 built
 succesfully on my desktop yesterday:

 Successfully installed r-3.1.1.p0

 Regards,
 Jan





 On 18 November 2014 13:22, Volker Braun vbrau...@gmail.com wrote:

 The build failed because R insists on using openmp for some reason, but
 the openmp libraries are not installed (or of the wrong version):

 http://build.sagedev.org/release/builders/Zbin%20%
 20fast%20AIMS%20snapperkob%20%28Ubuntu%2014.04%20x86_64%29%
 20binary/builds/1/steps/compile_2/logs/r-project


 On Tuesday, November 18, 2014 5:00:26 AM UTC, pipedream wrote:

 Hi

 I do not see the 14.04 Ubuntu binaries here.
 http://boxen.math.washington.edu/home/sagemath/sage-mirror/l
 inux/64bit/index.html

 Are they not automatically generated?

 Regards,
 Jan

 On 17 November 2014 17:17, kcrisman kcri...@gmail.com wrote:

 The release notes have a broken link in them:

  http://boxen.math.washington.edu/home/release/sage-6.4/tick
 ets.html


 Yes, that has been reported before...

 By the way, Jeroen, I think I finished all the changes I'm going to
 for now.  Long-term, it would be fun to do some database thingie to
 standardize names of a few very frequent contributors who have them in a
 couple different formats.

 --
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  ^^-^^

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Re: [sage-release] Re: Sage 6.4 released

2014-11-18 Thread Jan Groenewald
Hi

I did

$SAGE_INSTALL_GCC=yes make

in the already built source tree, and it seemed to rebuild the relevant
parts without failing. Is that enough or should I try it in a cleanly
unpacked source tree?

Regards,
Jan


On 18 November 2014 15:56, Jan Groenewald j...@aims.ac.za wrote:

 Will do.

 Regards,
 Jan


 On 18 November 2014 15:29, Volker Braun vbraun.n...@gmail.com wrote:

 Try building with SAGE_INSTALL_GCC=yes, I'm pretty sure this is causing
 the problem.

 On Tuesday, November 18, 2014 11:56:03 AM UTC, pipedream wrote:

 Hi

 This is strange, the error I see is:

 /home/buildbot/build/sage/snapperkob/sage_git/build/local/var/tmp/sage/build/r-3.1.1.p0/src/bin/exec/R:
  /usr/lib/x86_64-linux-gnu/libgomp.so.1: version `GOMP_4.0' not found 
 (required by 
 /home/buildbot/build/sage/snapperkob/sage_git/build/local/var/tmp/sage/build/r-3.1.1.p0/src/lib/libR.so)

 I have the same version of libgomp1 (4.8.2-19ubuntu1) installed on my
 14.04 64bit desktop as that builder (snapperkob) and yet sage 6.4 built
 succesfully on my desktop yesterday:

 Successfully installed r-3.1.1.p0

 Regards,
 Jan





 On 18 November 2014 13:22, Volker Braun vbrau...@gmail.com wrote:

 The build failed because R insists on using openmp for some reason, but
 the openmp libraries are not installed (or of the wrong version):

 http://build.sagedev.org/release/builders/Zbin%20%
 20fast%20AIMS%20snapperkob%20%28Ubuntu%2014.04%20x86_64%29%
 20binary/builds/1/steps/compile_2/logs/r-project


 On Tuesday, November 18, 2014 5:00:26 AM UTC, pipedream wrote:

 Hi

 I do not see the 14.04 Ubuntu binaries here.
 http://boxen.math.washington.edu/home/sagemath/sage-mirror/l
 inux/64bit/index.html

 Are they not automatically generated?

 Regards,
 Jan

 On 17 November 2014 17:17, kcrisman kcri...@gmail.com wrote:

 The release notes have a broken link in them:

  http://boxen.math.washington.edu/home/release/sage-6.4/tick
 ets.html


 Yes, that has been reported before...

 By the way, Jeroen, I think I finished all the changes I'm going to
 for now.  Long-term, it would be fun to do some database thingie to
 standardize names of a few very frequent contributors who have them in a
 couple different formats.

 --
 You received this message because you are subscribed to the Google
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  ^^-^^

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Re: [sage-release] Re: Sage 6.2 released

2014-05-11 Thread Jan Groenewald
Hi

I see the Ubuntu binaries for amd64 14.04 are all mirrored with 12.04 in
the binary filenames.
It should be 14.04.

It's possible the new 14.04 toolchain built sage does not run cleanly on
12.04.

Waterfall should also show 14.04 in the first two columns here:
http://build.sagemath.org/sage/waterfall

Is Volker the right person to contact for this??

PS. The 12.04 section of the PPA will not be updated by me now, only the
14.04.
I hope to add 32bit for 14.04, it is not clear I will have time to continue
updating 12.04.

Regards,
Jan




On 9 May 2014 07:22, Jan Groenewald j...@aims.ac.za wrote:

 Hi

 The Ubuntu 12.04 binary is misnamed -- the buiildslave has been updated to
 14.04

 Regards,
 Jan


 On 8 May 2014 10:27, Volker Braun vbraun.n...@gmail.com wrote:

 Binaries are now available at:

 http://boxen.math.washington.edu/home/buildbot/binaries/

 Harald: please mirror when you are finished with updating the web page

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Re: [sage-release] Re: Sage 6.1.1 released

2014-02-10 Thread Jan Groenewald
Hi

Ugh, the icon48x48.png is now in a sagen-nb version-dependant path.

So 6.1.1ubuntu1 had a broken desktop icon. For that small update, I had to
push out a new package, and everyone gets a new large download.

I'll try to incorporate automatically updating the icon path in the
sagemath.desktop file in my make-a-new-package script.

Regards,
Jan



On 9 February 2014 11:19, Jan Groenewald j...@aims.ac.za wrote:

 Hi

 The PPA for 12.04 is updated now. There were some problems with updating
 the file layout in 6.1, if you upgraded to that in a few days you may have
 to massage apt and dpkg to fix it. It looks like 6.1.1 upgrades cleanly and
 installs from scratch cleanly.

 I'll copy to quantal and saucy if 6.1.1 looks like it is stable in the PPA.

 Point me at ask.sagemath questions if anyone has a broken apt because of
 6.1.

 Regards,
 Jan



 On 9 February 2014 05:06, kcrisman kcris...@gmail.com wrote:

 Anyone know the status of the Ubuntu PPA lately?  A few folks have been
 asking on ask.sagemath and elsewhere... I think Jan G. provides them, but
 maybe others do as well?

 On Thursday, February 6, 2014 12:21:34 PM UTC-5, Harald Schilly wrote:

 On Thu, Feb 6, 2014 at 5:11 PM, Volker Braun vbrau...@gmail.com
 wrote:
  Harald: please mirror!


 ok, will take a while, but should be all fine then.

 harald

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Re: [sage-release] Re: Sage 6.1.1 released

2014-02-09 Thread Jan Groenewald
Hi

The PPA for 12.04 is updated now. There were some problems with updating
the file layout in 6.1, if you upgraded to that in a few days you may have
to massage apt and dpkg to fix it. It looks like 6.1.1 upgrades cleanly and
installs from scratch cleanly.

I'll copy to quantal and saucy if 6.1.1 looks like it is stable in the PPA.

Point me at ask.sagemath questions if anyone has a broken apt because of
6.1.

Regards,
Jan



On 9 February 2014 05:06, kcrisman kcris...@gmail.com wrote:

 Anyone know the status of the Ubuntu PPA lately?  A few folks have been
 asking on ask.sagemath and elsewhere... I think Jan G. provides them, but
 maybe others do as well?

 On Thursday, February 6, 2014 12:21:34 PM UTC-5, Harald Schilly wrote:

 On Thu, Feb 6, 2014 at 5:11 PM, Volker Braun vbrau...@gmail.com wrote:
  Harald: please mirror!


 ok, will take a while, but should be all fine then.

 harald

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