Re: [Paraview] Clearing a selection created in python

2017-10-05 Thread Felipe Bordeu
Thank you! Le 5 oct. 2017 20:56, "Cory Quammen" a écrit : > Felipe, > > I can confirm this behavior, and I have filed a bug report here: > > https://gitlab.kitware.com/paraview/paraview/issues/17749 > > Thanks, > Cory > > On Thu, Sep 14, 2017 at 4:06 AM, Felipe Bordeu

Re: [Paraview] Clearing a selection created in python

2017-10-05 Thread Cory Quammen
Felipe, I can confirm this behavior, and I have filed a bug report here: https://gitlab.kitware.com/paraview/paraview/issues/17749 Thanks, Cory On Thu, Sep 14, 2017 at 4:06 AM, Felipe Bordeu wrote: > Hi, I'm trying to create a selection using python, but I have a

Re: [Paraview] [EXT] Re: Details of XML filter with lists of input arrays

2017-10-05 Thread Dennis Conklin
Utkarsh, Thanks for that information - I have figured it out now. A few notes for others who are or will in the future follow this subject: The object of this exercise is to write a Programmable Filter that will put up a list of your Cell or Point variables and allow the user to select which

[Paraview] Volume average along 1-dimension

2017-10-05 Thread A
Hi all, I have a 3D volume (xyz) with each point/cell having a corresponding value (velocity; this is a model of the crust and seismic velocity). I want to calculate a 1D average velocity profile along the z-axis (so at every depth average all the x-y velocity values). Any idea? Thanks!

[Paraview] Question about modify data in VTK files

2017-10-04 Thread Li, Teng
Hi, I have a question about modify the data in vtk files and then visualize them again in Paraview. First, I have 118 vtk files which record the information of each time step. In order to process some data in my vtk files, I plan to store them as .CSV files. I saved them as points data files.

Re: [Paraview] Paraview 5.4.1 error message & freeze

2017-10-04 Thread Sonya Davydycheva
Cory, The Glyph works just fine with my data.vtk and is very useful tool! It was a good advice. As to not-responding and freezing of ParaView: let me accumulate statistics and then I will let you know. I appreciate your help, Sonya Davydycheva On Wed, Oct 4, 2017 at 6:27 PM, Cory Quammen

Re: [Paraview] Paraview 5.4.1 error message & freeze

2017-10-04 Thread Cory Quammen
[cc'ing to the paraview mailing list so others may contribute to and benefit from the discussion] On Tue, Oct 3, 2017 at 3:44 PM, Sonya Davydycheva wrote: > Thank you Cory, > > For your prompt response. Good to know that the message is harmless. > > My Paraview 5.4.1 just

[Paraview] 100% CPU usage once again

2017-10-04 Thread Paul Kapinos
Dear ParaView developer, in [1] you say > If you have information on disabling the busy wait using a different MPI > implementation, please contribute back by documenting it here. Here we go. a) It is possible to build 'pvserver' using Intel MPI (and GCC compilers). By setting I_MPI_WAIT_MODE

Re: [Paraview] Paraview 5.4.1 error message & freeze

2017-10-04 Thread Mathieu Westphal
My comment provide a reliable way to obtain the error you see, but I'm afraid it is not related to your problem, at least not directly. Mathieu Westphal On Wed, Oct 4, 2017 at 3:58 PM, Sonya Davydycheva wrote: > Thank you Mathieu, > > Could you please clarify if your comment

Re: [Paraview] [EXT] Re: Details of XML filter with lists of input arrays

2017-10-04 Thread Utkarsh Ayachit
Dennis, Oops sorry, it slipped my mind you were doing this for programmable filter. It should be doable, but I'll need to dig -- don't remember of the top of my head. I'll put it on my plate to put together a small example for you. Utkarsh On Wed, Oct 4, 2017 at 7:59 AM, Dennis Conklin

Re: [Paraview] Paraview 5.4.1 error message & freeze

2017-10-04 Thread Sonya Davydycheva
Thank you Mathieu, Could you please clarify if your comment is related to the freezing of my Paraview window, or to the empty image? And what is the recipe to handle this? I appreciate your help, Sonya Davydycheva On Wed, Oct 4, 2017 at 2:29 AM, Mathieu Westphal <

Re: [Paraview] [EXT] Re: Details of XML filter with lists of input arrays

2017-10-04 Thread Dennis Conklin
Utkarsh, I think you have me confused with a real programmer! ;- ) I am just trying to write a Programmable Filter in python and I'm lost. I want to write an xml plugin that will put up a list of all the cell variables and let the user select from then and then have the names of those

Re: [Paraview] Paraview 5.4.1 error message & freeze

2017-10-04 Thread Mathieu Westphal
FYI it appears if I force the size of the remote rendering window on my tiling window manager. Irrelevant in microsoft windows context, but still. Mathieu Westphal On Tue, Oct 3, 2017 at 11:12 PM, Cory Quammen wrote: > On Tue, Oct 3, 2017 at 3:31 PM, Sonya Davydycheva

Re: [Paraview] Paraview 5.4.1 error message & freeze

2017-10-03 Thread Cory Quammen
On Tue, Oct 3, 2017 at 3:31 PM, Sonya Davydycheva wrote: > Hello, > > Does anybody know what this Output message mean? (appears when I press > "Example Visuatizations"... thougth, some examples emerge), > - > QWindowsWindow::setGeometry: Unable to set geometry

Re: [Paraview] [EXT] Re: Details of XML filter with lists of input arrays

2017-10-03 Thread Utkarsh Ayachit
> So, after the user chooses some variables, are the chosen variable names in > "input_array"? > Or does "input_array" contain True or False based on which he chose, in > which case where are the corresponding names of the variables? When user selects variables, he's doing it on the

[Paraview] Paraview 5.4.1 error message & freeze

2017-10-03 Thread Sonya Davydycheva
Hello, Does anybody know what this Output message mean? (appears when I press "Example Visuatizations"... thougth, some examples emerge), - QWindowsWindow::setGeometry: Unable to set geometry 996x403+228+226 on QWidgetWindow/'pqExampleVisualizationsDialogWindow'. Resulting geometry:

Re: [Paraview] "Reload Files" Hotkey Acting on Individual Items --- Expected?

2017-10-03 Thread Joel Kulesza
Joachim, Excellent, thank you for that snippet—it worked perfectly. My thanks also for correcting my terminology. Is this something that would merit adding to ParaView's native functionality (e.g., File -> Reload Files & File -> Reload All Files)? Best regards, Joel On Tue, Oct 3, 2017 at

Re: [Paraview] [EXT] Re: Details of XML filter with lists of input arrays

2017-10-03 Thread Dennis Conklin
Utkarsh, So, for the first example we have: I get that the InputTypeDomain links it to cell arrays! - thanks for that. So, after the user chooses some variables, are the chosen

Re: [Paraview] "Reload Files" Hotkey Acting on Individual Items --- Expected?

2017-10-03 Thread Joachim Pouderoux
Hi Joel, You are right, the Reload feature only applies to the active source (reader). As in Python paraview.simple provides a function to reload the files of a source proxy, you could add the following Python Macro to reload all reader sources at once: from paraview.simple import * for k,v in

Re: [Paraview] [EXT] Re: Details of XML filter with lists of input arrays

2017-10-03 Thread Utkarsh Ayachit
> To be more exact, I wrote a routine here that does an area-weighted average > of some variables.Now the users are asking if I can give them a list of > variables in the model and they can choose which ones to calculate a weighted > average. There are many filters you can base this on.

Re: [Paraview] [EXT] Re: Details of XML filter with lists of input arrays

2017-10-03 Thread Dennis Conklin
All, To be more exact, I wrote a routine here that does an area-weighted average of some variables.Now the users are asking if I can give them a list of variables in the model and they can choose which ones to calculate a weighted average.I can envision a Custom filter where I have a

Re: [Paraview] [EXT] Re: Details of XML filter with lists of input arrays

2017-10-03 Thread Dennis Conklin
Utkarsh, I am adding this property on a filter, so it’s input – I want to process some variables and let the user choose which of his variables to process! Thanks Dennis From: Utkarsh Ayachit [mailto:utkarsh.ayac...@kitware.com] Sent: Tuesday, October 03, 2017 1:24 PM To: Dennis Conklin

Re: [Paraview] Details of XML filter with lists of input arrays

2017-10-03 Thread Utkarsh Ayachit
Dennis, Before I answer the question, I need to know what are you adding this property on? Is this a filter or a reader? The difference is that for a reader, the information about arrays available is provided by the reader itself; while for filter, that information is obtained from its input.

[Paraview] Details of XML filter with lists of input arrays

2017-10-03 Thread Dennis Conklin
All, I'm confused about how to write an XML plugin that lets the user select input variables for processing. Say I want to put up a list of cell variables and let the user select which ones to process: I see this:

Re: [Paraview] XDMF Version 2 and 3 Differences

2017-10-02 Thread David E DeMarle
Oops I forgot, +3 xdmf3 has support for DMP parallel writes in master (will appear in PV 5.5.) David E DeMarle Kitware, Inc. Principal Engineer 21 Corporate Drive Clifton Park, NY 12065-8662 Phone: 518-881-4909 On Mon, Oct 2, 2017 at 1:58 PM, David E DeMarle wrote:

Re: [Paraview] XDMF Version 2 and 3 Differences

2017-10-02 Thread David E DeMarle
Hi Mike. You mean select the XDMF "Reader", not "Writer" when you open the file correct? In theory XDMF3 should read almost anything XDMF2 could. The main practical differences in my recollection are: + xdmf3 doesn't leak memory and is faster and less of a memory hog, especially with time

Re: [Paraview] ParaViewWeb Visualizer black screen

2017-10-02 Thread Sebastien Jourdain
Hi Louise, You are right, there is indeed more changes which might not be strait forward for you to fix. Even if in reality, it is only a bunch of import path to fix. Just out of curiosity, did you try to run the command line that the launcher is running by hand and see if you have the same

Re: [Paraview] ParaView session state

2017-10-02 Thread Sebastien Jourdain
Hi Eduardo, That message is indeed the state but only for the proxy object and the VTK instance underneath. Unfortunately (for you) the state of the vtkSMSessionProxyManager is not the whole state of the application. Each state is specific to its instance. In order to get the full state of the

Re: [Paraview] Remote rendering through reverse SSH breaks with a GLX error

2017-10-02 Thread Utkarsh Ayachit
Robert, A few suggestions: 1. let's see what GL you're getting. If you run the following, what it the output? pgc104% DISPLAY=:0.0 glxinfo 2. What GPU do you have and which drivers? If it's NVidia with new enough drivers that support EGL, an EGL-enabled build may be a good way to

Re: [Paraview] ParaViewWeb Visualizer black screen

2017-10-02 Thread Sebastien Jourdain
Hi Louise, I'm wondering how big is the display on the remote server? Even if no screen is connected, you do need to define a display size which in your case may be tiny by default? Otherwise, if you use the nightly binaries or paraview/master, you can tweak your launcher config to use pvbatch

[Paraview] ParaViewWeb Visualizer black screen

2017-10-02 Thread louise.davies
Hello, I have been trying to set up a ParaViewWeb server on my CentOS 6 machine to run Visualizer. I have gotten to a point where the UI loads correctly but remote rendering only displays a black screen. Not even the axes in the bottom left are displayed. However, if I switch to local

[Paraview] Specific OpenFOAM case crashes the server

2017-10-01 Thread Robert Sawko
Dear All, I have been recently testing remote rendering in paraview and I seem to have concocted a case which breaks remotely works locally. The case is an OpenFOAM U-bend simulation and I am happy to share the files. They're about 61MB. On the remote side I get: pvserver:

Re: [Paraview] Changing default setting for cylinder filter

2017-10-01 Thread kenichiro yoshimi
Hi, Unfortunately vtkCylinderSource class doesn't seem to allow you to change default settings for the axis direction. Hence you should apply the transform filter after creating a cylinder. Thanks 2017-10-01 15:00 GMT+09:00 Muhammad Kashif Saeed : > Hi everyone, > I

[Paraview] Changing default setting for cylinder filter

2017-10-01 Thread Muhammad Kashif Saeed
Hi everyone, I want to draw a cylinder in ParaView. its default setting is such that its height is in the y-direction but i want to change it in z_direction. I have radius 0.07 m and height 0.3 m in Z direction plz help me thanks -- *Muhammad Kashif Saeed* Chemical Engineer Cell:

Re: [Paraview] Windows MPI capable Paraview binary install package question

2017-09-29 Thread David E DeMarle
Hey Giovanni, We publish two windows binaries for ParaView. The one without mpi in the name doesn't need anything special to run. The other one depends on microsofts mpi, which do not provide, but is available from microsoft for free and is easy to install if you have the need. Your suggested

Re: [Paraview] Windows MPI capable Paraview binary install package question

2017-09-29 Thread Cory Quammen
On Fri, Sep 29, 2017 at 5:46 PM, Cone, Giovanni Antonio wrote: > Hello gang, > > We're attempting to deploy the PV-5.4.1 Windows client via the SCCM > utility on our systems here at LANL. Our SCCM team deployed the MPI- > enabled version for user installation. Early testers are

[Paraview] Windows MPI capable Paraview binary install package question

2017-09-29 Thread Cone, Giovanni Antonio
Hello gang, We're attempting to deploy the PV-5.4.1 Windows client via the SCCM utility on our systems here at LANL. Our SCCM team deployed the MPI- enabled version for user installation. Early testers are encountering an error message regarding a missing "msmpi.dll" library. I'm suspecting

[Paraview] "Reload Files" Hotkey Acting on Individual Items --- Expected?

2017-09-29 Thread Joel Kulesza
Colleagues: In the File menu I would expect that the "Reload Files (F5)" command would apply to all items in the pipeline browser rather than the one currently selected or last acted on. For individual reloading, I would expect to need to use the right-click approach to "Reload Files." However,

Re: [Paraview] link 403

2017-09-29 Thread Cory Quammen
Hi Paul, Thanks for the report! I have fixed the link on that page. Cory On Fri, Sep 29, 2017 at 12:20 PM, Paul Kapinos wrote: > Dear ParaView developer, > > This is my very 1st mail to this list (and thus a test), and a report about a > broken link here:

[Paraview] link 403

2017-09-29 Thread Paul Kapinos
Dear ParaView developer, This is my very 1st mail to this list (and thus a test), and a report about a broken link here: https://www.paraview.org/Wiki/ParaView#Developers_Corner Clicking on https://public.kitware.com/mailman/subscribe/paraview-developers results in 403 Permission Denied, maybe

Re: [Paraview] Coprocessing with many time steps

2017-09-28 Thread Samuel Key
Hermano, Here is an example *pvd file. Samuel Key FMA Development 1005 39th Ave NE Great Falls, Montana,  USA On 9/28/2017 1:21 PM, Andy Bauer wrote: Hi, The XML readers and writers don't properly support time so currently the best way would be to create a pvd file which would contain the

Re: [Paraview] Coprocessing with many time steps

2017-09-28 Thread Andy Bauer
Hi, The XML readers and writers don't properly support time so currently the best way would be to create a pvd file which would contain the time and time step information. I don't know of anything in VTK or ParaView that writes out pvd files (I only see a vtkPVDReader in ParaView) but the format

Re: [Paraview] Coprocessing with many time steps

2017-09-28 Thread Hermano Lustosa
Ohh I see... Just another quick question. Currently, I am creating a series of VTU and VTI files whose names follow the pattern mysimulation-t%d. With %d being replaced by an integer index identifying the time step. I am about to code a simple PVD writer to consolidate the output and also to

Re: [Paraview] Coprocessing with many time steps

2017-09-28 Thread Andy Bauer
Hi, The TemporalStatistics filter (or any other filter that iterates through time steps) doesn't currently work with Catalyst. We hope to change this in the future but because of the way that the ParaView pipeline works it makes it a non-trivial change. Andy On Thu, Sep 28, 2017 at 2:40 PM,

[Paraview] Coprocessing with many time steps

2017-09-28 Thread Hermano Lustosa
I have doubt about using paraview catalyst from my simulation code. Suppose I created a simple Paraview pipeline containing the TemporalStatistics filter only. Initially, it is not clear for which "dummy" source is adequate for the script. I used a simple programmable source or even a

[Paraview] Remote rendering through reverse SSH breaks with a GLX error

2017-09-28 Thread Robert Sawko
Dear Paraviewers, I am trying to run Paraview in a client-server mode on a remote compute node using a reverse SSH through the login node. I have successfully worked out my port forwarding skulduggery and was able to connect to a host which does NOT run X server. Inside my local client. I do get

Re: [Paraview] Force or deactivate some Readers. Reuse the Paraview already running

2017-09-28 Thread Utkarsh Ayachit
> 1) I always work with xmdf files and every time I have to choose the reader > to use in the menu, can we deactivate or force the use of a specific reader > in the command line? Not currently, but that's a nice and easy feature to add. Feel free to report a feature request. > 2) also if I run a

[Paraview] Force or deactivate some Readers. Reuse the Paraview already running

2017-09-28 Thread Felipe Bordeu
I already put this in a feature request, but I dont know if someone is interested: 1) I always work with xmdf files and every time I have to choose the reader to use in the menu, can we deactivate or force the use of a specific reader in the command line? I know a can change the extension of my

[Paraview] XDMF Version 2 and 3 Differences

2017-09-28 Thread Michael Jackson
Where might I find the differences between XDMF version 2 and 3? Our project writes a .xdmf file along side our HDF5 file so that ParaView can visualize the data. Ever since ParaView version 5.x was released with the XDMF 3 included we always have to select the "XDMF Writer" when opening the

Re: [Paraview] ParaView session state

2017-09-27 Thread eduardo
Hi Aron and all, Following this discussion For what I can see, all the session state is stored in a variable called "State" inside Internals of vtkSMSessionProxyManager (vtkSMSessionProxyManagerInternals). This State is of type vtkSMMessage, which is a typedef of

Re: [Paraview] [vtkusers] Paraview Error while reading .vts file

2017-09-27 Thread Cory Quammen
Hi Siming, Please reply-all to keep the discussion on the list so others may participate and benefit. This line in your export code is a problem: sgrid->GetCellData()->AddArray(probe->GetOutput()->GetPointData()->GetArray(i)); Point and cell data arrays have different lengths for structured

Re: [Paraview] [vtkusers] Paraview Error while reading .vts file

2017-09-27 Thread Cory Quammen
[Moving this discussion over to the ParaView list serve as it has to do with ParaView.] Unfortunately, there's not enough information in the header file. What wrote this .vts file? Thanks, Cory On Wed, Sep 27, 2017 at 9:25 AM, Siming Bayer wrote: > Yes, > > the whole

Re: [Paraview] [EXTERNAL] ParaView session state

2017-09-26 Thread Scott, W Alan
Hi. I have no idea, will let others reply to the question. Alan From: ParaView [mailto:paraview-boun...@paraview.org] On Behalf Of edua...@berrocal.info Sent: Tuesday, September 26, 2017 10:33 AM To: paraview@paraview.org Subject: [EXTERNAL] [Paraview] ParaView session state Hello list,

Re: [Paraview] ParaView session state

2017-09-26 Thread eduardo
Thanks Aron !! September 26, 2017 10:33 AM, "Aron Helser" wrote: Hi Eduardo, I think you've basically got it, but the state is more complicated than you think. Basically everything has a vtkSMProxy, and those proxies contain the state of the pipeline, representation, and views. Anything that

Re: [Paraview] ParaView session state

2017-09-26 Thread Aron Helser
Hi Eduardo, I think you've basically got it, but the state is more complicated than you think. Basically everything has a vtkSMProxy, and those proxies contain the state of the pipeline, representation, and views. Anything that is modified from the defaults gets saved in the state file. The

Re: [Paraview] [Non-DoD Source] Re: ParaView GPU support (UNCLASSIFIED)

2017-09-26 Thread Su, Simon M CIV USARMY RDECOM ARL (US)
CLASSIFICATION: UNCLASSIFIED Hi Robert, Thank you for your email. We will pull that and start using that going forward. We have a system with Tesla P100 and Joe had to manually change the CUDA library detection to get the compile going. Do you know anyone that was successful in getting the

[Paraview] ParaView session state

2017-09-26 Thread eduardo
Hello list, Where is the data structure(s) in the code where all the objects for the state of a particular ParaView session are kept while it is running?. I have been reading the code, and I think it should be in the "internals" of vtkSMSessionProxyManager, but I am unsure. As far as I

Re: [Paraview] Paraview Web bug on windows

2017-09-26 Thread Aron Helser
I can confirm that the bug still exists on Windows with the ParaView 5.4.1 binaries downloaded from paraview.org. To fix it, you can do a little patch to your installation of ParaView. In the file {ParaViewInstallDir}\bin\Lib\site-packages\paraview\web\protocols.py, around line 1070, add these

Re: [Paraview] Paraview Web bug on windows

2017-09-26 Thread Sebastien Jourdain
It was probably not back ported to the release branch of 5.4 when Aron fixed it. On Tue, Sep 26, 2017 at 9:31 AM, Daniel Zuidinga wrote: > it works with the nightly build of pv > > > Am 26.09.2017 um 15:23 schrieb Sebastien Jourdain: > > This might be related to

Re: [Paraview] Paraview Web bug on windows

2017-09-26 Thread Daniel Zuidinga
it works with the nightly build of pv Am 26.09.2017 um 15:23 schrieb Sebastien Jourdain: This might be related to https://github.com/Kitware/visualizer/issues/34 On Tue, Sep 26, 2017 at 1:34 AM, Daniel Zuidinga > wrote: Hi, as soon as I

Re: [Paraview] Fwd: paraview.simple

2017-09-26 Thread Cory Quammen
Hmm, this is very odd. I don't know why libarpack would be loaded. It looks like something is loading it and libarpack does not like the libgfortran that ships with ParaView. If you are familiar with gdb, could you run pvpython through gdb and get a stack trace where libarpack is being loaded?

Re: [Paraview] [Non-DoD Source] Re: ParaView GPU support (UNCLASSIFIED)

2017-09-26 Thread Robert Maynard
Hi Simon, The ability to enable CUDA support in the ParaViewSuperbuild has been added. You will need to have the latest superbuild, and enable `ENABLE_cuda` for support to be added. On Thu, Sep 21, 2017 at 1:08 PM, Su, Simon M CIV USARMY RDECOM ARL (US) wrote: >

Re: [Paraview] Loading cell data from a netcdf file in ParaView

2017-09-26 Thread Aashish Chaudhary
I believe that is limitation of current ParaView readers. Dan can probably correct me. - Aashish On Tue, Sep 26, 2017 at 8:58 AM Tyson Whitehead wrote: > Hi all, > > A quick request for some help loading cell data from a netcdf file in > ParaView. > > I'm using the

Re: [Paraview] Trouble running paraview 5.4.1 with client-server mode.

2017-09-26 Thread Utkarsh Ayachit
Zhen, Seems like the pvserver process is segfaulting/aborting. When does it happen, as soon as the client connects or after someone steps? It hard to gauge what could be going on. Is it possible for you to do a "debug" build of ParaView on your cluster and then run through gdb? If can get the

Re: [Paraview] Accessing particles generated by ParticleTracer

2017-09-26 Thread Mathieu Westphal
Hello Simplest way to go would be to add a Python Programmable Filter after the particle tracer, that process each point and does not copy it when it is too far from an arbitrary point. This would work, even with paraview release, but will not be so most efficient implementation. Harder way to

Re: [Paraview] Accessing particles generated by ParticleTracer

2017-09-26 Thread Van Moer, Mark W
Hi Mathieu, The full science context is, this is a simulation of a binary black hole system. The way the solver works, the black hole locations aren’t actually in the mesh, they’re stored as separate coordinates with an associated radius. The black holes orbit each other during the simulation,

[Paraview] Trouble running paraview 5.4.1 with client-server mode.

2017-09-26 Thread Zhen Ni
Hi, I have installed paraview 5.4.1 on my local macbook and our redhat cluster, and tried to run the client-server mode. However, some errors occurred after the connection and forced it broken. Can you please provide some information on how to resolve this issue? [image: Inline image 3] --

Re: [Paraview] Paraview Web bug on windows

2017-09-26 Thread Sebastien Jourdain
This might be related to https://github.com/Kitware/visualizer/issues/34 On Tue, Sep 26, 2017 at 1:34 AM, Daniel Zuidinga wrote: > Hi, > > as soon as I select a dataset to colorize pvpython stops working (see > attached screenshot). > > I use the latest 5.4.1 windows 64bit

[Paraview] Loading cell data from a netcdf file in ParaView

2017-09-26 Thread Tyson Whitehead
Hi all, A quick request for some help loading cell data from a netcdf file in ParaView. I'm using the "NetCDF files generic and CF conventions" reader under ParaView 5.2.0 (the x86_64 linux build you can download off the website). I believe I've followed the CF cell conventions, but it

Re: [Paraview] [EXT] Re: Did we change vtk/numpy_interface/internal_algorithms dot routine?

2017-09-26 Thread Dennis Conklin
Berk, Thanks – I know what to do next! Dennis From: Berk Geveci [mailto:berk.gev...@kitware.com] Sent: Monday, September 25, 2017 3:47 PM To: Dennis Conklin Cc: Paraview (paraview@paraview.org) Subject: [EXT] Re: [Paraview] Did we change

Re: [Paraview] Accessing particles generated by ParticleTracer

2017-09-26 Thread Mathieu Westphal
Hello Can you give some context ? At which level of implementation are you trying to do that ? Best, Mathieu Westphal On Tue, Sep 26, 2017 at 12:09 AM, Van Moer, Mark W wrote: > Looks like I’d have to get at the std::vector > ParticleVector that’s inherited from

Re: [Paraview] Accessing particles generated by ParticleTracer

2017-09-25 Thread Van Moer, Mark W
Looks like I'd have to get at the std::vector ParticleVector that's inherited from vtkParticleTracerBase? I'm guessing that's not exposed by the proxy. Mark From: Van Moer, Mark W Sent: Monday, September 25, 2017 2:25 PM To: ParaView Subject: Accessing particles

Re: [Paraview] Did we change vtk/numpy_interface/internal_algorithms dot routine?

2017-09-25 Thread Berk Geveci
Yes, in 2014, I added a dot function that is better suited to what folks expect out of ParaView (do a dot of each vector on each point or cell). If you want the numpy.dot, you can do: import numpy numpy.dot(a,b) rather than just dot(a,b) In general, I would recommend not ever doing from numpy

[Paraview] Accessing particles generated by ParticleTracer

2017-09-25 Thread Van Moer, Mark W
Hi ParaView, Is it possible to get at the individual particles generated by ParticleTracer? I've been handed a mesh with a velocity field and an implied particle sink. I'd like to delete any particles that wander within a certain radius of that sink. My thought was if I could get at the array

[Paraview] Did we change vtk/numpy_interface/internal_algorithms dot routine?

2017-09-25 Thread Dennis Conklin
All, I have a Paraview plugin which works in v4.4 but gives an error message (attached) in v5.4.1 (both Linux). Did we add some assertions in the dot routine, or did we switch from the native numpy dot to a vtk implementation. I am not at liberty to release the plugin to the general public,

Re: [Paraview] [EXTERNAL] Problem resetting pan & zoom camera function

2017-09-25 Thread Scott, W Alan
ParaView on Linux, 5.4.1, local server. I just tried changing all three buttons to Pan, and all three buttons only did Pan. Next, I tried resetting to default, and this also worked. Try moving (or deleting) your ~/.config/ParaView/* files? Alan From: ParaView

[Paraview] Problem resetting pan & zoom camera function

2017-09-25 Thread Michael Robinson
I don't seem to be able to change the 3D camera manipulators in the Edit/Settings menu. Regardless of how I change them (zoom, pan, etc), the actual function seem to retain the default settings. I am using the standard Linux 64-bit download version of ParaView 5.4.1. Any suggestions? Michael

Re: [Paraview] Apply Tecplot table format file (.dat)

2017-09-22 Thread Oh Hyejin
Hi all, I modified my data file to same as residual.dat you send. But still it cannot be read in Paraview. If I change it into .txt file, then it can be read but there is only one column. Best, Hyejin 2017-09-21 13:23 GMT-04:00 Deij-van Rijswijk, Menno : > Hi all, > > > I

[Paraview] Updated OpenVR/Vive support

2017-09-22 Thread Ken Martin
A quick update on some improved support for OpenVR/Vive in ParaView. Over the past few months there has been a lot of work put into improving the integration of OpenVR with ParaView and VTK including extending VTK's event model to better handle 3D events. Almost all of these changes have been

[Paraview] ParaView session state

2017-09-21 Thread eduardo
Hello list, Where is the data structure(s) in the code where all the objects for the state of a particular ParaView session are kept while it is running?. I have been reading the code but can't figure it out. As far as I understand, the state (which can be saved to XML) is all it takes to

Re: [Paraview] Convert VTU for Arctic Viewer

2017-09-21 Thread Sebastien Jourdain
How to you run ArcticViewer? Which OS are you on? On Thu, Sep 21, 2017 at 1:01 PM, Chris Marsh wrote: > Ah yes, that works. Thanks. > > I have modified the 2nd example (vtk) to work on a single vtu file I have > (so no time) and output a single array. It appears to

Re: [Paraview] Convert VTU for Arctic Viewer

2017-09-21 Thread Chris Marsh
Ah yes, that works. Thanks. I have modified the 2nd example (vtk) to work on a single vtu file I have (so no time) and output a single array. It appears to complete fully and it writes the the tar fiels to my data directory. When I try to serve up these data, I'm presented with a static image of

Re: [Paraview] Convert VTU for Arctic Viewer

2017-09-21 Thread Sebastien Jourdain
Just download ParaView binary and use pvpython. You will have everything required meaning both vtk and paraview side of things. On Thu, Sep 21, 2017 at 12:17 PM, Chris Marsh wrote: > Hi Sebastien, > This is very helpful, thanks! > > Current hangup is that vtk.web.* is not

Re: [Paraview] Convert VTU for Arctic Viewer

2017-09-21 Thread Chris Marsh
Hi Sebastien, This is very helpful, thanks! Current hangup is that vtk.web.* is not available. I've installed vtk --with-python via homebrew (I use vtk successfully from python regularly). However the web components do not seem available. Googling isn't helping me. Any suggestions? Cheers Chris

Re: [Paraview] Apply Tecplot table format file (.dat)

2017-09-21 Thread Deij-van Rijswijk, Menno
Hi all, I created the Tecplot table data importer a while ago. As the tecplot file format is very flexible, it is impossible to create a reader that caters to all possibilities (without knowledge on how the format can be used). So, the residuals.dat file is an example that our simulation code

Re: [Paraview] Convert VTU for Arctic Viewer

2017-09-21 Thread Sebastien Jourdain
Hi Chris, Thanks for your interest. The following Python scripts provide an example on how to generate such dataset. https://github.com/Kitware/arctic-viewer/blob/master/scripts/examples/paraview/mpas/raw-probe-flat-earth.py

[Paraview] Convert VTU for Arctic Viewer

2017-09-21 Thread Chris Marsh
Hi, I have a set of vtu files that represent a time series of spatial data. I would like to visualize it via the arctic viewer. Ultimately, I'd like something similar to the Flat earth probing example given here ( http://tonic.kitware.com/). However it's unclear how to convert a vtu to the

Re: [Paraview] [Non-DoD Source] Re: ParaView GPU support (UNCLASSIFIED)

2017-09-21 Thread Su, Simon M CIV USARMY RDECOM ARL (US)
CLASSIFICATION: UNCLASSIFIED Hello Robert, thank you for your reply and we are looking forward to your email. Joe has made some progress on that front on one of our newly installed system. We are seeing some 12x performance gain on our compute nodes with GPU hardware. We are looking into

Re: [Paraview] [Non-DoD Source] Re: ParaView GPU support (UNCLASSIFIED)

2017-09-21 Thread Robert Maynard
Hi Simon, Currently the VTK-m support that is offered by the ParaView superbuild doesn't support enabling CUDA. I am in the process of adding this option to the superbuild and can notify you when this feature has been merged in. In the short-term you would want to manual modify the vtk-m

Re: [Paraview] parallel processing in volume rendering and Merge Blocks filter ...

2017-09-21 Thread Andy Bauer
Hi Ufuk, The Merge Blocks filter will work locally on each process and shouldn't move any of the data between MPI processes since it's a trivially parallel operation. When doing volume rendering of unstructured grids (the output dataset type of the merge blocks filter) with Ice-T in parallel,

Re: [Paraview] Apply Tecplot table format file (.dat)

2017-09-21 Thread Mathieu Westphal
Hello Please keep the discussion in the mailing list so everyone can contribute. Your dataset (OJF_Out-SPECIES.DAT) does not seem to have the right Tecplot format. Please take a look to this tecplot .dat file (residuals.dat) , wich can be opened with ParaView flawlessly. You may try to correct

Re: [Paraview] Apply Tecplot table format file (.dat)

2017-09-21 Thread Mathieu Westphal
Hello Can you please share the error ? Can you share your dataset ? Best regards, Mathieu Westphal On Wed, Sep 20, 2017 at 8:08 PM, Oh Hyejin wrote: > Hi, > I am graduate student and having problem with applying data to paraview. > I loaded Tecplot table format file

Re: [Paraview] parallel processing in volume rendering and Merge Blocks filter ...

2017-09-21 Thread Ufuk Utku Turuncoglu (BE)
Hi Andy, Thanks for the clarification. One minor question, after applying Merge Blocks is it still processing in serial mode or can i use MPI to improve the performance? By the way, i am also using NVIDIA Index plugin. I think that it supports parallel rendering but again not for multi block

Re: [Paraview] [paraview] visualize higher order element.

2017-09-20 Thread Andy Bauer
Hi, What do you mean by the extract operator? ParaView has a variety of filters (similar to VisIt's operators) for performing extracts of different types. Could you also share your dataset? That may make it easier to diagnose the issue. Best, Andy On Wed, Sep 20, 2017 at 2:33 PM, Ezhilmathi

Re: [Paraview] parallel processing in volume rendering and Merge Blocks filter ...

2017-09-20 Thread Andy Bauer
Hi Ufuk, ParaView doesn't currently support volume rendering of multiblock datasets, even in serial, so using the Merge Blocks filter is probably the best way to do any volume rendering of your dataset. Cheers, Andy On Wed, Sep 20, 2017 at 2:45 PM, Ufuk Turuncoglu <

[Paraview] parallel processing in volume rendering and Merge Blocks filter ...

2017-09-20 Thread Ufuk Turuncoglu
Hi, I am trying to perform volume rendering (VR) using multi-block + multi-piece dataset. In this case, the data file has single block that contains multiple piece (created by MPI parallel simulation code) and it is in structured grid. When I try to use volume rendering with raw data, it

[Paraview] [paraview] visualize higher order element.

2017-09-20 Thread Ezhilmathi Krishnasamy
Hi, I have fluid domain as a cube and inside this cube I have sphere. In the linear element mesh if I use extract operator and apply the clip as well I can see the sphere surface. But where as in higher order element mesh. If i follow the same procedure, I don't see the sphere surface instead

[Paraview] Apply Tecplot table format file (.dat)

2017-09-20 Thread Oh Hyejin
Hi, I am graduate student and having problem with applying data to paraview. I loaded Tecplot table format file and when I hit the apply button, the error appears. And then the program get stopped. Let me know what should I do to solve this problem. Best, Hyejin

Re: [Paraview] Subdomain

2017-09-20 Thread Muhammad Kashif Saeed
Thanks cory for your cooperation. I have done this in MATLAB :-) On 13 Sep 2017 10:58 a.m., "Muhammad Kashif Saeed" wrote: > Can I make Programmable clip filter which can clip 200 or more sections > of domain separately? > ___

Re: [Paraview] [Non-DoD Source] Re: ParaView GPU support (UNCLASSIFIED)

2017-09-20 Thread Su, Simon M CIV USARMY RDECOM ARL (US)
CLASSIFICATION: UNCLASSIFIED Hi Utkarsh, is there a sure way to tell if our ParaView VTK-m compilation has the correct CUDA support? For the superbuild process, is there a way to force the detection of CUDA library and fail the superbuild process if CUDA library is not correctly detected?

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