Re: [sage-devel] Re: multivariate polynomial multiplication, division, GCD, factorization

2010-07-15 Thread William Stein
On Fri, Jul 16, 2010 at 8:12 AM, parisse wrote: > > >> Hi, >> >> Is your factoring code (and corresponding benchmarks) multithreaded? >> > > The factoring code is not multithreaded, but it calls multivariate > polynomial multiplication several times during the Hensel lift phase, > and that code is

[sage-devel] Re: multivariate polynomial multiplication, division, GCD, factorization

2010-07-15 Thread parisse
> Hi, > > Is your factoring code (and corresponding benchmarks) multithreaded? > The factoring code is not multithreaded, but it calls multivariate polynomial multiplication several times during the Hensel lift phase, and that code is multithreaded. The timings reported are when you add time for

Re: [sage-devel] Should build errors automatically report system information?

2010-07-15 Thread Jason B Hill
I added a basic script and some examples, plus some notes, to trac ticket 8048. Jason On Thu, Jul 15, 2010 at 4:13 PM, Jason B Hill wrote: > > This processor actually appears to be 64-bit capable, due to the "lm" > (long-mode) flag. > > I confirmed this via the following link: > http://ark.intel

Re: [sage-devel] Re: Unreasonable docfails in symbolic/random_tests.py

2010-07-15 Thread Carl Witty
On Thu, Jul 15, 2010 at 1:38 PM, Andrey Novoseltsev wrote: > Hi Carl, > > For example this installation of sage-4.5.alpha1 > > novos...@sage:/scratch/novoselt/sage-4.5.alpha1/devel/sage-main$ hg > qapplied > trac_9502_basis_parent_bug_in_FreeModule.patch > trac_9128-sphinx_links_all-fh.patch > tra

Re: [sage-devel] Bug in matrix constructor?

2010-07-15 Thread Mike Hansen
On Thu, Jul 15, 2010 at 7:54 PM, Nicolas M. Thiery wrote: > Should I file a ticket? http://trac.sagemath.org/sage_trac/ticket/9344 which has a positive review. --Mike -- To post to this group, send an email to sage-devel@googlegroups.com To unsubscribe from this group, send an email to sage-d

[sage-devel] Bug in matrix constructor?

2010-07-15 Thread Nicolas M. Thiery
Should I file a ticket? sage: matrix(5,3,lambda i,j: 1) [1 1 1] [1 1 1] [1 1 1] I would have expected: sage: matrix(5,3,lambda i,j: 1) [1 1 1] [1 1 1] [1 1 1] [1 1 1] [1 1 1] Cheers,

Re: [sage-devel] multivariate polynomial multiplication, division, GCD, factorization

2010-07-15 Thread William Stein
On Fri, Jul 16, 2010 at 12:28 AM, William Stein wrote: > On Fri, Jul 9, 2010 at 2:32 PM, parisse > wrote: >> I have updated the benchmarks page of giac, with comparison with magma >> and trip there: >> http://www-fourier.ujf-grenoble.fr/~parisse/giac/benchmarks/benchmarks.html >> I'm curious to

Re: [sage-devel] multivariate polynomial multiplication, division, GCD, factorization

2010-07-15 Thread William Stein
On Fri, Jul 9, 2010 at 2:32 PM, parisse wrote: > I have updated the benchmarks page of giac, with comparison with magma > and trip there: > http://www-fourier.ujf-grenoble.fr/~parisse/giac/benchmarks/benchmarks.html > I'm curious to know if this will raise interest in integrating giac in > sage on

Re: [sage-devel] multivariate polynomial multiplication, division, GCD, factorization

2010-07-15 Thread William Stein
On Fri, Jul 9, 2010 at 2:32 PM, parisse wrote: > I have updated the benchmarks page of giac, with comparison with magma > and trip there: > http://www-fourier.ujf-grenoble.fr/~parisse/giac/benchmarks/benchmarks.html > I'm curious to know if this will raise interest in integrating giac in > sage on

Re: [sage-devel] Should build errors automatically report system information?

2010-07-15 Thread Jason B Hill
This processor actually appears to be 64-bit capable, due to the "lm" (long-mode) flag. I confirmed this via the following link: http://ark.intel.com/Product.aspx?id=33916 Thanks though. Any testing is good testing. Jason On Thu, Jul 15, 2010 at 3:51 PM, John Cremona wrote: > j...@ubuntu%cat

Re: [sage-devel] Fwd: [MathFaculty] Call for proposals for the Banff International Research Station 2012 (fwd)

2010-07-15 Thread Tom Boothby
On Thu, Jul 15, 2010 at 6:59 AM, William Stein wrote: > Sage Days in Banff?? Road trip! I'll be living in Vancouver, and I do like the drive up to Banff. -- To post to this group, send an email to sage-devel@googlegroups.com To unsubscribe from this group, send an email to sage-devel+unsubscr

Re: [sage-devel] Should build errors automatically report system information?

2010-07-15 Thread John Cremona
j...@ubuntu%cat /proc/cpuinfo | grep "flags" | uniq flags : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe nx lm constant_tsc arch_perfmon pebs bts pni monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr sse4_1 lahf_lm ida

Re: [sage-devel] Should build errors automatically report system information?

2010-07-15 Thread Jason B Hill
I only have access to 64-bit processors. (My 32-bit machine was recently stolen.) Can someone with a 32-bit processor (not just the OS, I need the hardware itself to only support 32-bit) running any flavor of Linux please copy and paste the result of the following shell command? $ cat /proc/cpuinf

Re: [sage-devel] Should there be some *good* examples on notebook?

2010-07-15 Thread Carl Witty
On Thu, Jul 15, 2010 at 1:27 PM, Carl Witty wrote: > One very simple change might be easier to implement/use.  How about if > there were both a "share" button and a "publish" button, and these > went in to separate sections?  I'm guessing that people asking for > help with an error message, etc.,

Re: [sage-devel] Fwd: [MathFaculty] Call for proposals for the Banff International Research Station 2012 (fwd)

2010-07-15 Thread Justin C. Walker
On Jul 15, 2010, at 06:59 , William Stein wrote: Sage Days in Banff?? Hell, I'd go! +1 Justin -- Justin C. Walker, Curmudgeon at Large Institute for the Absorption of Federal Funds --- If it weren't for carbon-14, I wouldn't date at all. --- -- To post to this group, send

[sage-devel] Re: Unreasonable docfails in symbolic/random_tests.py

2010-07-15 Thread Andrey Novoseltsev
Hi Carl, For example this installation of sage-4.5.alpha1 novos...@sage:/scratch/novoselt/sage-4.5.alpha1/devel/sage-main$ hg qapplied trac_9502_basis_parent_bug_in_FreeModule.patch trac_9128-sphinx_links_all-fh.patch trac_9128-intersphinx_python_database-fh.patch trac_9188_fix_facet_normal.patch

Re: [sage-devel] Re: Re: [sage-release] Re: sage-4.5.rc1 released

2010-07-15 Thread Robert Miller
As I understand it, the (gfan on eno and taurus) issue has been resolved, but since I've already got the build going on taurus, I won't stop it. PS - Passes all tests on eno! -- Robert L. Miller http://www.rlmiller.org/ -- To post to this group, send an email to sage-devel@googlegroups.com To

Re: [sage-devel] Should there be some *good* examples on notebook?

2010-07-15 Thread Carl Witty
On Tue, Feb 23, 2010 at 1:14 PM, Robert Bradshaw wrote: > On Feb 23, 2010, at 8:39 AM, Dr. David Kirkby wrote: > >> If one sets up a Sage server for public use, there is the opportunity for >> someone to publish worksheets, there is a section: >> >> >> "Browse published Sage worksheets >> (no logi

Re: [sage-devel] Re: Unreasonable docfails in symbolic/random_tests.py

2010-07-15 Thread Carl Witty
On Tue, Jul 13, 2010 at 6:39 AM, Andrey Novoseltsev wrote: > On Jul 13, 3:37 am, Carl Witty wrote: >> On Thu, Jun 17, 2010 at 2:18 PM, Volker Braun wrote: >> > Unsurprisingly, setting the random seed makes the random_expr() always >> > return the same value: >> >> > sage: set_random_seed(0xdeadb

Re: [sage-devel] cephes is seriously broken

2010-07-15 Thread Peter Jeremy
On 2010-Jul-14 19:24:30 -0700, Robert Bradshaw wrote: >On Wed, Jul 14, 2010 at 1:21 PM, Dr. David Kirkby > wrote: >> Peter Jeremy asked me if I'd look at the cephes package, as he was having >> trouble with it. It's only installed on CYGWIN, so 99% of people are not >> going to see that cephes is

Re: [sage-devel] Re: Re: [sage-release] Re: sage-4.5.rc1 released

2010-07-15 Thread Robert Miller
John, Sage built fine for me on eno. I'm running tests now. My install.log is here: http://sage.math.washington.edu/home/rlmill/sage-4.5.rc1.eno.install.log I'll try taurus next. -- Robert L. Miller http://www.rlmiller.org/ -- To post to this group, send an email to sage-devel@googlegroups.c

[sage-devel] 64-bit Solaris 10 SPARC port

2010-07-15 Thread drkirkby
When William started the Sage 5.0 thread yesterday, I said I thought there was an 80% chance of a 64-bit SPARC port by time Sage 5.0 is released at the end of next month http://groups.google.co.uk/group/sage-devel/msg/cbce56100f9b1544 I think I'll increase that to 98% now, as I have actually

[sage-devel] Re: Fwd: [MathFaculty] Call for proposals for the Banff International Research Station 2012 (fwd)

2010-07-15 Thread Dima Pasechnik
Europe... :-) well, to me Banff is as far as it gets (flying Singapore-Europe- Calgary is almost as fast as flying Singapore-Japan/HK-Vancouver- Calgary, and more convenient), but I still would come. Dima On Jul 15, 3:54 pm, John Cremona wrote: > As always with Banff: > > pro -- great place in a

Re: [sage-devel] Re: Re: [sage-release] Re: sage-4.5.rc1 released

2010-07-15 Thread David Kirkby
On 15 July 2010 18:15, William Stein wrote: > On Thu, Jul 15, 2010 at 7:14 PM,   wrote: >> On Jul 15, 2010 4:55pm, William Stein wrote: >>> On Thu, Jul 15, 2010 at 5:51 PM, John H Palmieri jhpalmier...@gmail.com> >>> wrote: >>> >>> > On Jul 15, 6:34 am, Robert Miller r...@rlmiller.org> wrote: >>>

Re: [cython-users] Re: [sage-devel] Cython cpu time

2010-07-15 Thread Ondrej Certik
On Thu, Jul 15, 2010 at 12:57 AM, Fernando Perez wrote: > On Wed, Jul 14, 2010 at 11:54 PM, Ondrej Certik wrote: >> I hope he is. I haven't seen any patches since 2009-03-13 and it >> segfaulted my code, but I fixed it and sent him the patches. (I pulled >> his repo using hg-git, and pushed into

Re: [sage-devel] Re: Re: [sage-release] Re: sage-4.5.rc1 released

2010-07-15 Thread William Stein
On Thu, Jul 15, 2010 at 7:14 PM, wrote: > On Jul 15, 2010 4:55pm, William Stein wrote: >> On Thu, Jul 15, 2010 at 5:51 PM, John H Palmieri jhpalmier...@gmail.com> >> wrote: >> >> > On Jul 15, 6:34 am, Robert Miller r...@rlmiller.org> wrote: >> >> >> PS --- Let's be sure to check "deps" to make s

[sage-devel] Re: Re: [sage-release] Re: sage-4.5.rc1 released

2010-07-15 Thread drkirkby
On Jul 15, 2010 4:55pm, William Stein wrote: On Thu, Jul 15, 2010 at 5:51 PM, John H Palmieri jhpalmier...@gmail.com> wrote: > On Jul 15, 6:34 am, Robert Miller r...@rlmiller.org> wrote: >> PS --- Let's be sure to check "deps" to make sure that gfan has all >> its dependencies, since w

[sage-devel] Should we create a 'reversed' deps file for test purposes?

2010-07-15 Thread drkirkby
Currently the spkg/standard/deps file has the dependancies for Sage listed in alphabetical order. I suspect that might mean for serial builds, if there are no stated dependancies, things build in alphabetical order. all: $(BASE) \ $(INST)/$(ATLAS) \ $(INST)/$(BLAS) \ $(INST)/$(BOEHM_GC) \ $(I

Re: [sage-devel] Re: Vote on making GNU patch a standard package

2010-07-15 Thread Robert Bradshaw
On Thu, Jul 15, 2010 at 2:22 AM, John Cremona wrote: >> >> +1 I really like this idea. All the advantages of mercurial queues >> without the late dependancies or requirement that the source be under >> revision control. (The patch queue itself would be under the .spkg >> control). The actual pushi

Re: [sage-devel] Re: R + GLPK

2010-07-15 Thread David Kirkby
On 15 July 2010 16:38, Robert Miller wrote: > On Thu, Jul 15, 2010 at 1:51 PM, David Kirkby wrote: >> 3) GLPK should be built before R if we ever hope to use it in R >> 4) GLPK should be built before CVXOPT if there is any hope of using >> those together. > > Shouldn't we wait until we implement

Re: [sage-devel] Re: R + GLPK

2010-07-15 Thread Robert Miller
On Thu, Jul 15, 2010 at 1:51 PM, David Kirkby wrote: > 3) GLPK should be built before R if we ever hope to use it in R > 4) GLPK should be built before CVXOPT if there is any hope of using > those together. Shouldn't we wait until we implement using GLPK from these? Otherwise we are potentially s

[sage-devel] Re: R + GLPK

2010-07-15 Thread Nathan Dunfield
> > Has this > > already been done, or should I file a patch for this? > > If you would be so kind... I  saw no mention of it until I read your > message :-) Ok, I'll do it in the next couple of days, taking into account David's comment about skpg build order. Nathan -- To post to this group, s

Re: [sage-devel] Fwd: [MathFaculty] Call for proposals for the Banff International Research Station 2012 (fwd)

2010-07-15 Thread John Cremona
As always with Banff: pro -- great place in all respects con -- very expensive to get there, especially from Europe! John On 15 July 2010 14:59, William Stein wrote: > Sage Days in Banff?? > > > -- Forwarded message -- > From: Gunther Uhlmann > Date: 2010/7/15 > Subject: [MathF

[sage-devel] Fwd: [MathFaculty] Call for proposals for the Banff International Research Station 2012 (fwd)

2010-07-15 Thread William Stein
Sage Days in Banff?? -- Forwarded message -- From: Gunther Uhlmann Date: 2010/7/15 Subject: [MathFaculty] Call for proposals for the Banff International Research Station 2012 (fwd) To: facu...@math.washington.edu, facu...@amath.washington.edu, stat...@stat.washington.edu FYI:

Re: [sage-devel] pari OPTFLAG and #7092

2010-07-15 Thread William Stein
On Thu, Jul 15, 2010 at 11:45 AM, John Cremona wrote: > In ticket #7092 a change was made to the spkg-install script for pari > so that on ALL linux systems the compiler flag was changed from -O3 > (the default from the pari distribution) to -O1, in order to fix a > build issue which ONLY arises o

Re: [sage-devel] cephes is seriously broken

2010-07-15 Thread Francesco Biscani
[possibly OT] Out of curiosity, what was the rationale for going for SAGE on Cygwin instead of MinGW? Cheers, Francesco. -- To post to this group, send an email to sage-devel@googlegroups.com To unsubscribe from this group, send an email to sage-devel+unsubscr...@googlegroups.com For more opt

Re: [sage-devel] cephes is seriously broken

2010-07-15 Thread David Kirkby
On 15 July 2010 03:24, Robert Bradshaw wrote: > On Wed, Jul 14, 2010 at 1:21 PM, Dr. David Kirkby > wrote: >> Peter Jeremy asked me if I'd look at the cephes package, as he was having >> trouble with it. It's only installed on CYGWIN, so 99% of people are not >> going to see that cephes is broken

Re: [sage-devel] Re: R + GLPK

2010-07-15 Thread David Kirkby
On 15 July 2010 12:29, François Bissey wrote: >> In my email above, I just appended '$(INST)/$(GLPK)' to the end of the >> CVXOPT line as it currently is in spkg/standard/deps.. I did not add >> NUMPY myself. If a dependency can be removed, it would be useful, as >> it might permit more efficient

Re: [sage-devel] pari OPTFLAG and #7092

2010-07-15 Thread David Kirkby
On 15 July 2010 10:45, John Cremona wrote: > In ticket #7092 a change was made to the spkg-install script for pari > so that on ALL linux systems the compiler flag was changed from -O3 > (the default from the pari distribution) to -O1, in order to fix a > build issue which ONLY arises on some vers

Re: [sage-devel] Re: R + GLPK

2010-07-15 Thread François Bissey
> In my email above, I just appended '$(INST)/$(GLPK)' to the end of the > CVXOPT line as it currently is in spkg/standard/deps.. I did not add > NUMPY myself. If a dependency can be removed, it would be useful, as > it might permit more efficient parallel builds. sorry Dave, I didn't imply you di

Re: [sage-devel] Re: R + GLPK

2010-07-15 Thread David Kirkby
On 15 July 2010 10:04, François Bissey wrote: >> On 07/14/10 10:58 PM, Nathan Dunfield wrote: >> I strongly suspect you would also need to make sure glpk builds before >> cvxopt by editing spkg/standard/deps. The cvxopt entry would then look >> like this. >> >> >> $(INST)/$(CVXOPT): $(BASE) $(INS

[sage-devel] Re: R + GLPK

2010-07-15 Thread dahl.joac...@gmail.com
CVXOPT has no dependencies on Numpy (but can exchange data with Numpy arrays efficiently via a buffer protocol). On Jul 15, 11:04 am, François Bissey wrote: > > On 07/14/10 10:58 PM, Nathan Dunfield wrote: > > >> On a similar note cvxopt can make use of glpk as well. > > > > Yes, it can --- I was

[sage-devel] pari OPTFLAG and #7092

2010-07-15 Thread John Cremona
In ticket #7092 a change was made to the spkg-install script for pari so that on ALL linux systems the compiler flag was changed from -O3 (the default from the pari distribution) to -O1, in order to fix a build issue which ONLY arises on some version of gcc which ships with Fedora 11. This was abo

Re: [sage-devel] Re: Vote on making GNU patch a standard package

2010-07-15 Thread John Cremona
> > +1 I really like this idea. All the advantages of mercurial queues > without the late dependancies or requirement that the source be under > revision control. (The patch queue itself would be under the .spkg > control). The actual pushing of a series could probably be a simple > command in spkg

Re: [sage-devel] Re: R + GLPK

2010-07-15 Thread François Bissey
> On 07/14/10 10:58 PM, Nathan Dunfield wrote: > >> On a similar note cvxopt can make use of glpk as well. > > > > Yes, it can --- I was just using this yesterday. > > > > The trick is that you have to tell cvxopt that glpk is available when > > it is compiled/installed. Now that glpk is standa

Re: [cython-users] Re: [sage-devel] Cython cpu time

2010-07-15 Thread Fernando Perez
On Wed, Jul 14, 2010 at 11:54 PM, Ondrej Certik wrote: > I hope he is. I haven't seen any patches since 2009-03-13 and it > segfaulted my code, but I fixed it and sent him the patches. (I pulled > his repo using hg-git, and pushed into github.) Cool, thanks. In the meantime I can use yours then.

[sage-devel] Re: Is symbolic ring a field?

2010-07-15 Thread Andrey Novoseltsev
Thanks for a quick reply, Mike! I have incorporated your changes, but there are further issues with number fields and their rings of integers (as I recall they are not always PIDs...). So for now I have left the call of the wrong constructor. Andrey On Jul 15, 12:29 am, Mike Hansen wrote: > Hel