Messages by Date
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2009/01/16
[Xplor-nih] about noe display in vmd-xplor
[email protected]
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2009/01/15
[Xplor-nih] Group and Fix
Andrew Severin
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2009/01/14
[Xplor-nih] Xplor-nih Digest, Vol 71, Issue 3
[email protected]
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2009/01/14
[Xplor-nih] Fix and group
[email protected]
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2009/01/14
[Xplor-nih] noe calc: unit?
Spitaleri Andrea
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2009/01/14
[Xplor-nih] Fix and group
Andrew Severin
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2009/01/09
[Xplor-nih] proton shift refinement
[email protected]
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2009/01/08
[Xplor-nih] proton shift refinement
David A. Horita
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2009/01/07
[Xplor-nih] seq2psf errors
[email protected]
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2009/01/07
[Xplor-nih] seq2psf errors
[email protected]
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2009/01/07
[Xplor-nih] seq2psf errors
Sanaz Dovell
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2008/12/16
[Xplor-nih] modifying scale of some but not all dihedral restraints at runtime
[email protected]
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2008/12/15
[Xplor-nih] modifying scale of some but not all dihedral restraints at runtime
Martin Allan
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2008/11/28
[Xplor-nih] querry
[email protected]
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2008/11/24
[Xplor-nih] Different Version of Xplor Resulting In Different Simulations?
[email protected]
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2008/11/19
[Xplor-nih] position available
[email protected]
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2008/11/17
[Xplor-nih] proton nomenclature
Duggan, Brendan M.
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2008/11/14
[Xplor-nih] proton nomenclature
[email protected]
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2008/11/14
[Xplor-nih] proton nomenclature
Duggan, Brendan M.
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2008/11/13
[Xplor-nih] Calling ensemble for calculation
[email protected]
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2008/11/13
[Xplor-nih] XPLOR NIH
[email protected]
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2008/11/13
[Xplor-nih] Different Version of Xplor Resulting In Different Simulations?
[email protected]
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2008/11/12
[Xplor-nih] Calling ensemble for calculation
[email protected]
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2008/11/12
[Xplor-nih] Different Version of Xplor Resulting In Different Simulations?
[email protected]
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2008/11/12
[Xplor-nih] Calling ensemble for calculation
Jie-rong Huang
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2008/11/12
[Xplor-nih] Calling ensemble for calculation
[email protected]
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2008/11/12
[Xplor-nih] Fwd: Multiple domain orientation
[email protected]
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2008/11/11
[Xplor-nih] Different Version of Xplor Resulting In Different Simulations?
[email protected]
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2008/11/11
[Xplor-nih] Calling ensemble for calculation
Jie-rong Huang
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2008/11/10
[Xplor-nih] Fwd: Multiple domain orientation
Andrew Severin
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2008/11/06
[Xplor-nih] Calling ensemble for calculation
[email protected]
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2008/11/06
[Xplor-nih] Calling ensemble for calculation
Jie-rong Huang
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2008/11/05
[Xplor-nih] patch problem - two segments?
[email protected]
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2008/11/04
[Xplor-nih] patch problem - two segments?
Jakob Toudahl Nielsen
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2008/11/04
[Xplor-nih] patch problem - two segments?
[email protected]
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2008/11/04
[Xplor-nih] patch problem - two segments?
Jakob Toudahl Nielsen
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2008/11/03
[Xplor-nih] problem about noe2xplor.py
[email protected]
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2008/11/03
[Xplor-nih] problem about noe2xplor.py
Yuan Zhang
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2008/10/27
[Xplor-nih] Imposing NCS term in Xplor for energy minimization
[email protected]
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2008/10/26
[Xplor-nih] Imposing NCS term in Xplor for energy minimization
Hao Huang
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2008/10/21
[Xplor-nih] refine_gentle in XplorPy?
[email protected]
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2008/10/21
[Xplor-nih] refine_gentle in XplorPy?
Mark Girvin
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2008/10/21
[Xplor-nih] refine_gentle in XplorPy?
[email protected]
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2008/10/20
[Xplor-nih] refine_gentle in XplorPy?
Mark Girvin
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2008/10/20
[Xplor-nih] xplor-nih status
[email protected]
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2008/10/20
[Xplor-nih] mailing list downtime
[email protected]
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2008/10/09
[Xplor-nih] pasd
[email protected]
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2008/10/09
[Xplor-nih] pasd
David A. Horita
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2008/10/08
[Xplor-nih] generate carbohydrate
[email protected]
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2008/10/08
[Xplor-nih] generate carbohydrate
Irina Nesmelova
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2008/09/27
[Xplor-nih] calculating dihedral angles of conformations and clustering
[email protected]
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2008/09/26
[Xplor-nih] calculating dihedral angles of conformations and clustering
Nah Sivar
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2008/09/25
[Xplor-nih] pdbTool and CYSP
[email protected]
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2008/09/24
[Xplor-nih] pdbTool and CYSP
Jeff Ellena
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2008/09/24
[Xplor-nih] Register by Friday: North Eastern Structure Symposium - Computational Approaches to Structural Biology
Gregory Choi
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2008/09/22
[Xplor-nih] patch-err when using seq2psf with HYP residue added
[email protected]
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2008/09/22
[Xplor-nih] patch-err when using seq2psf with HYP residue added
[email protected]
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2008/09/17
[Xplor-nih] visualize plane
[email protected]
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2008/09/16
[Xplor-nih] visualize plane
Jeff Ellena
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2008/09/16
[Xplor-nih] PASD
[email protected]
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2008/09/16
[Xplor-nih] NOE restraints in a multimer
Thomas Pochapsky
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2008/09/14
[Xplor-nih] NOE restraints in a multimer (Thomas Pochapsky)
John Vakonakis
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2008/09/13
[Xplor-nih] COLLapse term for homodimer
John Kuszewski
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2008/09/13
[Xplor-nih] NOE restraints in a multimer
John Kuszewski
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2008/09/12
[Xplor-nih] NOE restraints in a multimer
Thomas Pochapsky
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2008/09/11
[Xplor-nih] COLLapse term for homodimer
[email protected]
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2008/09/11
[Xplor-nih] COLLapse term for homodimer
Ramelot, Theresa A. Dr.
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2008/09/11
[Xplor-nih] COLLapse term for homodimer
Ramelot, Theresa A. Dr.
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2008/09/10
[Xplor-nih] Error on no atom spec when reading the NOE file
[email protected]
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2008/09/10
[Xplor-nih] Error on no atom spec when reading the NOE file
Yang, Thao
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2008/09/05
[Xplor-nih] how to restart an IVM torsional angle dynamics
[email protected]
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2008/09/05
[Xplor-nih] planeDistPot
[email protected]
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2008/09/05
[Xplor-nih] planeDistPot
Jeff Ellena
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2008/09/03
[Xplor-nih] how to restart an IVM torsional angle dynamics
Yi Xue
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2008/09/03
[Xplor-nih] how to restart an IVM torsional angle dynamics
[email protected]
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2008/09/02
[Xplor-nih] how to restart an IVM torsional angle dynamics
Yi Xue
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2008/08/28
[Xplor-nih] point-plane restraints
[email protected]
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2008/08/28
[Xplor-nih] point-plane restraints
Jeff Ellena
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2008/08/27
[Xplor-nih] psf and pdb files
[email protected]
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2008/08/27
[Xplor-nih] psf and pdb files
Jeff Ellena
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2008/08/26
[Xplor-nih] Question on "no peptide bond is shown"
[email protected]
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2008/08/26
[Xplor-nih] Question on "no peptide bond is shown"
[email protected]
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2008/08/24
[Xplor-nih] Xplor-nih Digest, Vol 66, Issue 5
[email protected]
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2008/08/23
[Xplor-nih] Question on "no peptide bond is shown"
[email protected]
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2008/08/22
[Xplor-nih] Question on "no peptide bond is shown"
Yang, Thao
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2008/08/21
[Xplor-nih] multiple structures in same xplor instance
[email protected]
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2008/08/14
[Xplor-nih] multiple structures in same xplor instance
Benjamin Stauch
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2008/08/13
[Xplor-nih] custom energy functions
[email protected]
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2008/08/13
[Xplor-nih] custom energy functions
Benjamin Stauch
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2008/08/13
[Xplor-nih] Empty conformations - frename: failed to rename
[email protected]
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2008/08/12
[Xplor-nih] Empty conformations - frename: failed to rename
Pooja Jain
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2008/08/07
[Xplor-nih] Rhom hitting upper and lower limits during RDC refinement
[email protected]
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2008/08/07
[Xplor-nih] Rhom hitting upper and lower limits during RDC refinement
Andrew Borgert
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2008/07/30
[Xplor-nih] Variable Name Instead of Variable Content
[email protected]
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2008/07/30
[Xplor-nih] Variable Name Instead of Variable Content
John Kuszewski
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2008/07/30
[Xplor-nih] Variable Name Instead of Variable Content
Pooja Jain
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2008/07/25
[Xplor-nih] too much temporary file use in xplor-nih
[email protected]
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2008/07/25
[Xplor-nih] too much temporary file use in xplor-nih
Zdenek Salvet
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2008/07/23
[Xplor-nih] order.py example questions
[email protected]
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2008/07/23
[Xplor-nih] order.py example questions
Giachetti Andrea - CERM
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2008/07/15
[Xplor-nih] improper and dihedral values for cis-proline
John Kuszewski
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2008/07/15
[Xplor-nih] improper and dihedral values for cis-proline
Christoph Schmidt
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2008/07/11
[Xplor-nih] Small-molecule generation for X-plor-NIH
Martin Stoermer
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2008/07/11
[Xplor-nih] Installation
[email protected]
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2008/07/11
[Xplor-nih] Installation
Justin Lecher
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2008/07/11
[Xplor-nih] cis proline cipp patch
[email protected]
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2008/07/11
[Xplor-nih] cis proline cipp patch
Christoph Schmidt
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2008/07/11
[Xplor-nih] Small-molecule generation for X-plor-NIH
Keith L Constantine
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2008/07/08
[Xplor-nih] Xplor-nih Digest, Vol 65, Issue 2
R.M. van der Werf
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2008/07/07
[Xplor-nih] Back calculation of RDC
[email protected]
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2008/07/07
[Xplor-nih] Small-molecule generation for X-plor-NIH
John Kuszewski
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2008/07/07
[Xplor-nih] Xplor-nih Digest, Vol 65, Issue 1
[email protected]
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2008/07/07
[Xplor-nih] Back calculation of RDC
Prem Prakash Pathak
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2008/07/07
[Xplor-nih] Small-molecule generation for X-plor-NIH
Keith L Constantine
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2008/06/24
[Xplor-nih] Dani python
[email protected]
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2008/06/24
[Xplor-nih] Dani python
Mueller, Geoffrey (NIH/NIEHS)
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2008/06/18
[Xplor-nih] Questions about tensor calculation and C++ vs Fortran code
[email protected]
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2008/06/18
[Xplor-nih] Questions about tensor calculation and C++ vs Fortran code
Jie-rong Huang
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2008/06/16
[Xplor-nih] [email protected]: Re: about anneal.py
[email protected]
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2008/06/16
[Xplor-nih] Questions about tensor calculation and C++ vs Fortran code
[email protected]
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2008/06/16
[Xplor-nih] Questions about tensor calculation and C++ vs Fortran code
Jie-rong Huang
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2008/06/14
[Xplor-nih] about anneal.py
那美荣
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2008/06/14
[Xplor-nih] about anneal.py
那美荣
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2008/06/04
[Xplor-nih] new to CNS
[email protected]
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2008/06/04
[Xplor-nih] Ensemble calculation of denatured protein
[email protected]
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2008/06/04
[Xplor-nih] new to CNS
Prem Prakash Pathak
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2008/06/04
[Xplor-nih] Ensemble calculation of denatured protein
Jie-rong Huang
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2008/06/03
[Xplor-nih] Ensemble calculation of denatured protein
[email protected]
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2008/06/02
[Xplor-nih] Ensemble calculation of denatured protein
Jie-rong Huang
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2008/05/30
[Xplor-nih] Calculation of palindromic DNA sequencev
John Kuszewski
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2008/05/30
[Xplor-nih] Calculation of palindromic DNA sequencev
[email protected]
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2008/05/30
[Xplor-nih] Calculation of palindromic DNA sequencev
Silke Johannsen, Anorganisch-Chemisches Inst.
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2008/05/22
[Xplor-nih] bond-breaking!
[email protected]
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2008/05/21
[Xplor-nih] bond-breaking!
David P. Giedroc
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2008/05/21
[Xplor-nih] calculating Hydrogen Bonds in Structures
[email protected]
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2008/05/21
[Xplor-nih] calculating Hydrogen Bonds in Structures
[email protected]
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2008/05/21
[Xplor-nih] Ensemble calculation of denatured protein
[email protected]
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2008/05/21
[Xplor-nih] Ensemble calculation of denatured protein
Jie-rong Huang
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2008/05/20
[Xplor-nih] calculating Hydrogen Bonds in Structures
Nah Sivar
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2008/05/19
[Xplor-nih] Xplor-nih Digest, Vol 63, Issue 8
R.M. van der Werf
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2008/05/19
[Xplor-nih] ERROR encountered on input (David P. Giedroc)
John Vakonakis
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2008/05/19
[Xplor-nih] ERROR encountered on input
David P. Giedroc
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2008/05/16
[Xplor-nih] A script for solvent modelling
[email protected]
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2008/05/15
[Xplor-nih] A script for solvent modelling
David Langelaan
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2008/05/13
[Xplor-nih] distance plot in pyXplor
[email protected]
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2008/05/13
[Xplor-nih] distance plot in pyXplor
Nah Sivar
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2008/05/13
[Xplor-nih] parallel marvin
John Kuszewski
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2008/05/12
[Xplor-nih] parallel marvin
[email protected]
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2008/05/12
[Xplor-nih] parallel marvin
David A. Horita
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2008/05/06
[Xplor-nih] longer time taken with parallelization
[email protected]
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2008/05/06
[Xplor-nih] longer time taken with parallelization
Nah Sivar
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2008/05/05
[Xplor-nih] [email protected]: Re: longer time taken with parallelization
[email protected]
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2008/05/05
[Xplor-nih] PASD: converting restraints to xplor
John Kuszewski
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2008/05/05
[Xplor-nih] Ensemble calculation of denatured protein
[email protected]
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2008/05/05
[Xplor-nih] PASD: converting restraints to xplor
Robert Schneider
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2008/04/30
[Xplor-nih] Ensemble calculation of denatured protein
Marius Clore
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2008/04/30
[Xplor-nih] Ensemble calculation of denatured protein
Jie-rong Huang
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2008/04/29
[Xplor-nih] [email protected]: Re: cis peptide bond
[email protected]
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2008/04/29
[Xplor-nih] Ensemble calculation of denatured protein
[email protected]
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2008/04/29
[Xplor-nih] Constrain the orientation angle
[email protected]
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2008/04/29
[Xplor-nih] Ensemble calculation of denatured protein
Jie-rong Huang
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2008/04/29
[Xplor-nih] PASD: netFilter in jointFilter gets stuck
Robert Schneider
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2008/04/29
[Xplor-nih] Constrain the orientation angle
Pooja Jain
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2008/04/25
[Xplor-nih] PASD: netFilter in jointFilter gets stuck
John Kuszewski
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2008/04/25
[Xplor-nih] Ensemble calculation of denatured protein
[email protected]
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2008/04/25
[Xplor-nih] Ensemble calculation of denatured protein
Jie-rong Huang
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2008/04/24
[Xplor-nih] PASD: netFilter in jointFilter gets stuck
Robert Schneider
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2008/04/24
[Xplor-nih] Ensemble calculation of denatured protein
Jie-rong Huang
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2008/04/24
[Xplor-nih] Saving the Trajectory
[email protected]
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2008/04/24
[Xplor-nih] Saving the Trajectory
Nah Sivar
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2008/04/23
[Xplor-nih] Ensemble calculation of denatured protein
[email protected]
-
2008/04/23
[Xplor-nih] Ensemble calculation of denatured protein
Jie-rong Huang
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2008/04/22
[Xplor-nih] Ensemble calculation of denatured protein
[email protected]
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2008/04/22
[Xplor-nih] Ensemble calculation of denatured protein
Jie-rong Huang
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2008/04/21
[Xplor-nih] A simple python script for SA
[email protected]
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2008/04/21
[Xplor-nih] A simple python script for SA
Nah Sivar
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2008/04/21
[Xplor-nih] Ensemble calculation of denatured protein
[email protected]
-
2008/04/21
[Xplor-nih] Ensemble calculation of denatured protein
Jie-rong Huang
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2008/04/21
[Xplor-nih] Multi-core problems with xplor-NIH
R.M. van der Werf
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2008/04/18
[Xplor-nih] Process: Irregular Exit ?
Nah Sivar
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2008/04/18
[Xplor-nih] Multi-core problems with xplor-NIH
[email protected]
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2008/04/18
[Xplor-nih] Process: Irregular Exit ?
[email protected]
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2008/04/18
[Xplor-nih] Using Amber force field in xplor-nih
[email protected]
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2008/04/18
[Xplor-nih] Multi-core problems with xplor-NIH
R.M. van der Werf
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2008/04/18
[Xplor-nih] Process: Irregular Exit ?
Nah Sivar
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2008/04/17
[Xplor-nih] Using Amber force field in xplor-nih
Qi Zhang
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2008/04/17
[Xplor-nih] Ensemble calculation of denatured protein
[email protected]
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2008/04/17
[Xplor-nih] Ensemble calculation of denatured protein
Jie-rong Huang
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2008/04/16
[Xplor-nih] Process: Irregular Exit ?
[email protected]
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2008/04/16
[Xplor-nih] Process: Irregular Exit ?
Nah Sivar
-
2008/04/16
[Xplor-nih] Process: Irregular Exit ?
[email protected]
-
2008/04/16
[Xplor-nih] Process: Irregular Exit ?
Nah Sivar
-
2008/04/15
[Xplor-nih] Calculation of palindromic DNA sequence
[email protected]
-
2008/04/15
[Xplor-nih] Calculation of palindromic DNA sequence
Silke Johannsen, Anorganisch-Chemisches Inst.
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2008/04/15
[Xplor-nih] Ensemble calculation of denatured protein
[email protected]
-
2008/04/15
[Xplor-nih] Ensemble calculation of denatured protein
Jie-rong Huang
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2008/04/13
[Xplor-nih] Calculating Radius of Gyration
John Kuszewski
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2008/04/13
[Xplor-nih] Calculating Radius of Gyration
Nah Sivar
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2008/04/11
[Xplor-nih] paiwise RMSD
[email protected]
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2008/04/11
[Xplor-nih] paiwise RMSD
Nah Sivar