Which options should I use when running mri_surf2vol? Crystal
On 2/1/13 1:08 PM, "Douglas N Greve" <gr...@nmr.mgh.harvard.edu> wrote: > >QDEC will create an output folder. In that folder, there will be a >folder for each contrast. In the contrast folder, there will be a >sig.mgh file. this has the -log10(p) significance values. You can >convert this to nifti with mri_convert, but it will still be on the >surface. If you need it in a volume, you can use mri_surf2vol >doug > >On 02/01/2013 09:34 AM, Franklin, Crystal G wrote: >> Freesurfer, >> >> I ran a group comparison using qdec and got my results showing the >> differences in the thickness between the groups. I want to take these >> results I see in the viewer and convert them to nifti format so I can >> use them in another software called MANGO. Which files do I need to >> convert that shows the contrast differences? >> >> Thank you, >> Crystal >> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > >-- >Douglas N. Greve, Ph.D. >MGH-NMR Center >gr...@nmr.mgh.harvard.edu >Phone Number: 617-724-2358 >Fax: 617-726-7422 > >Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting >FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html >Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > >_______________________________________________ >Freesurfer mailing list >Freesurfer@nmr.mgh.harvard.edu >https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > >The information in this e-mail is intended only for the person to whom it >is >addressed. If you believe this e-mail was sent to you in error and the >e-mail >contains patient information, please contact the Partners Compliance >HelpLine at >http://www.partners.org/complianceline . If the e-mail was sent to you in >error >but does not contain patient information, please contact the sender and >properly >dispose of the e-mail. > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
