Re: [Freesurfer] license issue with the updated version

External Email - Use Caution Please let us know if you are runningMacOS 14 (Sonoma) on an Intel or silicon Mac (M1, M2 chip). The system requirements at

Re: [Freesurfer] license issue with the updated version

n...@nmr.mgh.harvard.edu> *On Behalf Of *Atena Akbari > *Sent:* Friday, November 17, 2023 6:06 PM > *To:* freesurfer@nmr.mgh.harvard.edu > *Subject:* [Freesurfer] license issue with the updated version > > > > *External Email - Use Caution* > > Dear fre

Re: [Freesurfer] license issue with the updated version

:06 PM To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] license issue with the updated version External Email - Use Caution Dear freesurfer team I have uninstalled the previous versions of freesurfer on my mac (Sonoma 14.1), and have installed a new version 7.4.1 based on the step b

[Freesurfer] license issue with the updated version

External Email - Use Caution Dear freesurfer team I have uninstalled the previous versions of freesurfer on my mac (Sonoma 14.1), and have installed a new version 7.4.1 based on the step by step freesurfer installation info on the website. I have set the freesurfer home directory

Re: [Freesurfer] License issue

..@vtc.vt.edu> > Sent: Tuesday, January 31, 2023 12:21 PM > To: Freesurfer support list > Subject: [Freesurfer] License issue > > External Email - Use Caution > Hello all, > > I have gotten my license.txt file and I have copied it to the > $FREESURFERHOME Di

Re: [Freesurfer] License issue

rom: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Sayre, Christopher Sent: Tuesday, January 31, 2023 12:21 PM To: Freesurfer support list Subject: [Freesurfer] License issue External Email - Use Caution Hello all, I have gotten my license.txt file and I have cop

[Freesurfer] License issue

External Email - Use Caution Hello all, I have gotten my license.txt file and I have copied it to the $FREESURFERHOME Directory. When attempting to use freesurfer I am getting the following error. Error parsing licensing file, expected 4 values. Looking at the file there are 4

Re: [Freesurfer] License issue {Disarmed}

External Email - Use Caution Thank you! This seemed to work. I got my email address and the numbers this time in the license. Not sure what happened there. Good check. Sarah On Nov 20, 2018, at 3:46 PM, fsbuild mailto:fsbu...@contbay.com>> wrote: External Email - Use

Re: [Freesurfer] License issue

External Email - Use Caution Hi Sarah, I would just move that file aside (rename it to something that is not license.txt) and follow the instructions on the wiki to generate another license.txt file. Then you could check it again with the previous commands.

Re: [Freesurfer] License issue

External Email - Use Caution Hi, I ran the code and the license appeared, but no email address or numbers. These were the first few lines: FreeSurfer Software License Agreement ("Agreement") Version 1.0 (February 2011) Is this wrong? The rwx settings look

Re: [Freesurfer] License issue

External Email - Use Caution Hello Sarah, If you can bring up a terminal with your freesurfer environment set, then please try the following commands, i.e., $ cd $FREESURFER_HOME $ cat $FS_LICENSE output deleted Without posting the contents of your license, I think the

Re: [Freesurfer] License issue

External Email - Use Caution Yes, I set the FreeSurfer home environment and added the license file to that folder. It is Word readable. Sarah > On Nov 20, 2018, at 12:03 PM, Greve, Douglas N.,Ph.D. > wrote: > > did you put it in $FREESURFER_HOME/.license ? Is it

Re: [Freesurfer] License issue

did you put it in $FREESURFER_HOME/.license ? Is it world-readable? On 11/20/18 2:38 PM, Sarah Haigh wrote: > External Email - Use Caution > > Hello Freesurfers, > > Can anyone help with a licensing issue I have? I downloaded Freesurfer the > other day with a brand new license and got

[Freesurfer] License issue

External Email - Use Caution Hello Freesurfers, Can anyone help with a licensing issue I have? I downloaded Freesurfer the other day with a brand new license and got the following message: “ERROR: Invalid FreeSurfer license key was found in license file”. I tried getting a new

Re: [Freesurfer] FreeSurfer License issue

External Email - Use Caution Hi, Here's what I've learned from my attempts (eventually successful), to run freesurfer in docker on a mac: There are three tricks to running the freesurfer *docker* container. 1) You must request a license.txt file from the freesurfer website:

Re: [Freesurfer] FreeSurfer License issue

External Email - Use CautionApologize, I forgot  to attach the file with the license. Here it is.Best regards,CarolinaCarolina Bonivento 37084 *Cl5ULwBr1to2 FSr/.mH1ADRn2 Il giorno 20 lug 2018, alle ore 10:08, Carolina Bonivento ha scritto:Dear

[Freesurfer] FreeSurfer License issue

External Email - Use Caution Dear Sir/Madame, I recently subscribed the FS license (attached) but when I tried to run the 'recon-all’ (actually one of its steps, i.e. the MRI_ca_register) I received the following error message: ERROR: Invalid FreeSurfer license key found in

[Freesurfer] License issue

Dear FDs, According to the instructions, I have cut the 4 lines between the “CUT HERE”, copy and past the 4 lines into my license.txt file in the home directory to freesurfer folder as follow:

Re: [Freesurfer] License issue with qdec

Medical Center New York State Psychiatric Institute 646-774-5782 Message: 2 Date: Thu, 17 Sep 2015 12:14:14 -0400 From: Douglas N Greve <gr...@nmr.mgh.harvard.edu<mailto:gr...@nmr.mgh.harvard.edu>> Subject: Re: [Freesurfer] License issue with qdec To: freesurfer@nmr.mgh

Re: [Freesurfer] License issue with qdec

did you recently upgrade or reinstall? Does anything else run since you found this problem? Eg, mri_convert? When you created the .license file, did you put a valid license key in it? On 09/17/2015 12:09 PM, Lisa S. Pao wrote: > Hi everyone, > > I’m having some issues using qdec. The program

[Freesurfer] License issue with qdec

Hi everyone, I’m having some issues using qdec. The program runs for about 30 seconds, and then quits with the following error message: ERROR: FreeSurfer license file /Applications/freesurfer/.license not found. If you are outside the NMR-Martinos Center, go to

Re: [Freesurfer] UNRESOLVED: Re: Freesurfer License issue/bug on Opensuse 12.3

Nicola and Nick, Hi, its Nick (the other Nick :)). This looks like a new issue we haven't seen before that is specific to opensuse. Can you try downloading the file libcrypt.so.1 from this location: ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/misc/linux-centos6_x86_64/ copy it to your

Re: [Freesurfer] UNRESOLVED: Re: Freesurfer License issue/bug on Opensuse 12.3

Thanks Nick, well that did change something... here is what i get now with any fs command: /bin/tcsh: /lib64/libfreebl3.so: version `NSSRAWHASH_3.12.3' not found (required by /work2/rootbackup/usr/local/freesurfer/lib/libcrypt.so.1) Should I update/substitute /lib64/libfreebl3.so al well?

[Freesurfer] UNRESOLVED: Re: Freesurfer License issue/bug on Opensuse 12.3

Hi Nick, I included that just to illustrate there are no cut lines or newlines, it is not the information I entered, but rather an obfuscated license file. The license file I'm using works fine on an older version of Opensuse (11.4) and the 5.3 BETA, but not the newer 12.3 and 5.3 BETA.

Re: [Freesurfer] UNRESOLVED: Re: Freesurfer License issue/bug on Opensuse 12.3

Nick, Hi, I found what might the source of the problem and posted new versions of mri_convert and tkmedit.bin to this directory: ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/misc/linux-centos6_x86_64/ before trying the new mri_convert though, can you try the following? cd some writable

[Freesurfer] UNRESOLVED: Re: Freesurfer License issue/bug on Opensuse 12.3

Hi Nick, Truncated the email. I'm getting a license error for both the mri_convert command and the tkmedit command that you provided. The original also yields a license error (no segfault). You are right, my earlier test called tkmedit.bin directly. Thanks Nick On 05/08/2013 12:07 PM,

Re: [Freesurfer] UNRESOLVED: Re: Freesurfer License issue/bug on Opensuse 12.3

Nick Can you email me the .license file that is being used? Thanks, N. On Wed, 2013-05-08 at 13:21 -0500, Nick Jones wrote: Hi Nick, Truncated the email. I'm getting a license error for both the mri_convert command and the tkmedit command that you provided. The original also yields

Re: [Freesurfer] UNRESOLVED: Re: Freesurfer License issue/bug on Opensuse 12.3

Hi Nick (Schmansky), sorry to jump back in on this thread - I have exactly the same issue (license file not valid) on the same OS (and not on others) with *all* fs commands. I have tried multiple license files from other working installations. Is there anything else i can try? Thanks a lot

[Freesurfer] UNRESOLVED: Re: Freesurfer License issue/bug on Opensuse 12.3

Hi Nick, hi List, I have been having the exact same problem (also posted it on this list) with every freesurfer version on Opensuse 12.3, and haven't been able to sort it out. Any luck with it? Any pointers would be highly appreciated. Thanks in advance, Nicola On 5/1/2013 4:42 PM, Nick

Re: [Freesurfer] UNRESOLVED: Re: Freesurfer License issue/bug on Opensuse 12.3

Nicola and Nick, Can you try the tkmedit.bin found here: ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/misc/linux-centos6_x86_64/ copy it to the freesurfer/tktools directory (the wrapper script 'tkmedit' in the bin dir calls the binary in the tktools dir). I'm hoping the problem you

Re: [Freesurfer] UNRESOLVED: Re: Freesurfer License issue/bug on Opensuse 12.3

Hi Nick, It complains about libtix8.1.8.4.so missing. I add $FREESURFER_HOME/lib/tcltktixblt/lib/ to the LD_LIBRARY_PATH variable, but it still complains about the license and does not open bert. Tried the dev build and 5.3 beta, which also fail at the license. Why not remove the requirement

Re: [Freesurfer] UNRESOLVED: Re: Freesurfer License issue/bug on Opensuse 12.3

Hi Nick, sorry - I should have been more specific. I get the same error with *any* FS command or script (recon-all, mri_glmfit), so in effect ever since the upgrade I am not able to use FS at all. The tkmedit patch you posted is only missing a library on my system though, which I can fix -

[Freesurfer] Freesurfer License issue/bug on Opensuse 12.3

Hi, I've run into a license problem with the latest version of Freesurfer on OpenSuse 12.3. 64 bit. FREESURFER_HOME: /usr/freesurfer Build stamp: freesurfer-Linux-centos6_x86_64-stable-pub-v5.2.0 Kernel info: Linux 3.7.10-1.1-desktop x86_64 When running a test: /usr/freesurferecho $shell