Pathology numeric values not supported in DV_Quantity

2006-04-28 Thread Thomas Beale
William E Hammond wrote: Just yesterday I ran into this construct in looking at a dosing algorithm for pediatrics. Without the detail, the first time-related logic specified for the period of less than 7 days (7 days. The next logic line specified = 7 days. Without the =, the logic

Pathology numeric values not supported in DV_Quantity

2006-04-26 Thread Karsten Hilbert
On Tue, Apr 25, 2006 at 10:03:12AM +0100, Thomas Beale wrote: Not sure of the need for = or =. It's either beyond the value reading capability of the device or an actual value is record (within some accuracy tolerance). yes, this has already been mentioned - Vince has never seen it in the

Pathology numeric values not supported in DV_Quantity

2006-04-26 Thread Sandrine VILLAEYS
Je suis absente du bureau jusqu'au jeudi 26 avril 2006. Sandrine Villaeys

Pathology numeric values not supported in DV_Quantity

2006-04-26 Thread Gerard Freriks
Dear all, The CEN EN13606 EHRcom standard is using an attribute to indicate that 'something is going on' and that precautions must be taken. Resulting most often in the need for human intervention. Is such an attribute a possible intermediate solution for the problem here? Gerard --

Pathology numeric values not supported in DV_Quantity

2006-04-26 Thread William E Hammond
: Sent by:Subject: Re: Pathology numeric values not supported in DV_Quantity owner-openehr-technical

Pathology numeric values not supported in DV_Quantity

2006-04-25 Thread Thomas Beale
Heath Frankel wrote: Tom, Not sure of the need for = or =. It's either beyond the value reading capability of the device or an actual value is record (within some accuracy tolerance). Heath yes, this has already been mentioned - Vince has never seen it in the millions of results his

Pathology numeric values not supported in DV_Quantity

2006-04-25 Thread William E Hammond
: Pathology numeric values not supported in DV_Quantity owner-openehr-technical@ openehr.org

Pathology numeric values not supported in DV_Quantity

2006-04-22 Thread Tim Churches
Thomas Beale wrote: Colin Sutton wrote: The 'coding' is surely 'Accuracy' ('Measurement' has 'Accuracy') where this can be None|~|Unknown|Percentage(value)!SD(Distribution type,value) which would cover any measurement (e.g.height,heart rate), not just pathology lab values this seems

Pathology numeric values not supported in DV_Quantity

2006-04-22 Thread Gerard Freriks
Folks, I will repeat myself. You are talking about a data type. This DV_Quantity is a number. The question is how do we embellish this data type and the number it presents with extra codes/numbers to indicate: types of certainty/ uncertainty, and statistical distributions. The only real

Pathology numeric values not supported in DV_Quantity

2006-04-22 Thread Gerard Freriks
I agree. A workshop, moment of reflexion, is needed. We must understand better the real facts, the use cases, the requirements, before we come to wrong constructs in the wrong models or the correct ones. Next we need to use the same definitions for: Data Type, Composit Data Type, Archetype.

Pathology numeric values not supported in DV_Quantity

2006-04-21 Thread Thomas Beale
Colin Sutton wrote: The 'coding' is surely 'Accuracy' ('Measurement' has 'Accuracy') where this can be None|~|Unknown|Percentage(value)!SD(Distribution type,value) which would cover any measurement (e.g.height,heart rate), not just pathology lab values this seems pretty close to a

Pathology numeric values not supported in DV_Quantity

2006-03-22 Thread Sam Heard
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Pathology numeric values not supported in DV_Quantity

2006-03-21 Thread Thomas Beale
Sam Heard wrote: It is a flag that says the value is very uncertain - accuracy is not known - how do we say this - or a quality factor makes the reading very uncertain. I just want to be able to see how we express when accuracy is poor but not quantifiable. Sam doesn't it mean that the

Pathology numeric values not supported in DV_Quantity

2006-03-21 Thread Gerard Freriks
Thomas, In a data type like DV - in my mind- only flags can be raised that indicate the technicalities of that number. And that means round off error with which it is reported. All other flags are at the archetype level. Null-Flavors belong there. It is all at the semantic level, the

Pathology numeric values not supported in DV_Quantity

2006-03-20 Thread Grahame Grieve
I agree with this - that's it good enough now. I think this thread is starting to talk about things which aren't properly part of the data type, they are conceptual things about the result values, and should be modelled explicitly in the archetypes. Grahame Thomas Beale wrote: Sam would

Pathology numeric values not supported in DV_Quantity

2006-03-20 Thread Grahame Grieve
hi Thomas is it your feeling that we need to have a better model of accuracy, i.e. more like the confidence interval idea? Or are we ok with what we have? well. a measured quantity is a group of data, with some or all of the following things known: - what was measured - how it was measured

Pathology numeric values not supported in DV_Quantity

2006-03-20 Thread Tim Churches
Thomas Beale wrote: Grahame Grieve wrote: I agree with this - that's it good enough now. I think this thread is starting to talk about things which aren't properly part of the data type, they are conceptual things about the result values, and should be modelled explicitly in the archetypes.

Pathology numeric values not supported in DV_Quantity

2006-03-20 Thread Thomas Beale
Sam Heard wrote: Dear Tom and all I must say that quantifying accuracy and uncertainty is very difficult - and I do like the inclusion of ~ in the set of flags to mean approximately - when there is no idea of accuracy from a mathematical point of view. I think we may lose something if we

Pathology numeric values not supported in DV_Quantity

2006-03-20 Thread Thomas Beale
Heath Frankel wrote: Tom, Does leaving the current DV_QUANTITY the way it is include the ability to record 5 mmol/L for example? yes - sorry - that was ambiguous - we have to make that addition (using a coded attribute). - t

Pathology numeric values not supported in DV_Quantity

2006-03-20 Thread Colin Sutton
The 'coding' is surely 'Accuracy' ('Measurement' has 'Accuracy') where this can be None|~|Unknown|Percentage(value)!SD(Distribution type,value) which would cover any measurement (e.g.height,heart rate), not just pathology lab values Regards, Colin Sutton

Pathology numeric values not supported in DV_Quantity

2006-03-19 Thread Thomas Beale
Sam would be better able to give an idea of all the health professionals who have been consulted, but certainly in Australia, Vince McCauley (a pathologist) has been extremely helpful on pathology result detail. Also, people like Heath Frankel and Grahame Grieve who have worked with HL7v2

Pathology numeric values not supported in DV_Quantity

2006-03-19 Thread Thomas Beale
Grahame Grieve wrote: I agree with this - that's it good enough now. I think this thread is starting to talk about things which aren't properly part of the data type, they are conceptual things about the result values, and should be modelled explicitly in the archetypes. Grahame, is it your

Pathology numeric values not supported in DV_Quantity

2006-03-18 Thread Tim Churches
Gerard Freriks wrote: Hi, A few words from a non-techie. Quantity means that what is the resulting figure expressing a quantity. Hb: 8.5 mmol/L A property of the Hb measurement can be an uncertainty. This is not an uncertainty of the figure 8.5, but of the Hb measurement where 8.5 is

Pathology numeric values not supported in DV_Quantity

2006-03-17 Thread Tim Churches
Thomas Beale wrote: Concerning my last reply on this subject, I feel the appropriate solution is: * add an attribute value_qualifier of type STRING with allowable values , , =, =, = (since this is a closed list, using coded terms doesn't seem to be useful) * allow ELEMENT.null_flavour and

Pathology numeric values not supported in DV_Quantity

2006-03-17 Thread Tim Churches
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Pathology numeric values not supported in DV_Quantity

2006-03-17 Thread Thomas Beale
Tim Churches wrote: Tim, if the accuracy_is_percent attribute was upgraded to a coded value, could you suggest a set of meanings that would cover all the epi/PH needs? You'll have to tell me what that would involve. A single coded value? Upper and lower limits? Confidence level.

Pathology numeric values not supported in DV_Quantity

2006-03-17 Thread Gerard Freriks
Hi, A few words from a non-techie. Quantity means that what is the resulting figure expressing a quantity. Hb: 8.5 mmol/L A property of the Hb measurement can be an uncertainty. This is not an uncertainty of the figure 8.5, but of the Hb measurement where 8.5 is the correct resulting number

Pathology numeric values not supported in DV_Quantity

2006-03-16 Thread Thomas Beale
Concerning my last reply on this subject, I feel the appropriate solution is: * add an attribute value_qualifier of type STRING with allowable values , , =, =, = (since this is a closed list, using coded terms doesn't seem to be useful) * allow ELEMENT.null_flavour and DV_QUANTIFIED.accuracy

Pathology numeric values not supported in DV_Quantity

2006-03-03 Thread Vincent McCauley
- Original Message - From: Thomas Beale To: openehr-technical at openehr.org Sent: Friday, March 03, 2006 5:26 AM Subject: Re: Pathology numeric values not supported in DV_Quantity Grahame Grieve wrote: hi I don't think that the concept of , etc should be conflated

Pathology numeric values not supported in DV_Quantity

2006-03-02 Thread Thomas Beale
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Pathology numeric values not supported in DV_Quantity

2006-03-01 Thread Sam Heard
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Pathology numeric values not supported in DV_Quantity

2006-03-01 Thread Sam Heard
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Pathology numeric values not supported in DV_Quantity

2006-03-01 Thread Karsten Hilbert
On Wed, Mar 01, 2006 at 08:31:23PM +0930, Sam Heard wrote: I like the flags - I wonder if we should have a ? or ! for the value affected by a quality issue - what do others think? Probably ? for dubitable results. ! is commonly used here for marking up (perhaps unexpectedly) clinically

Pathology numeric values not supported in DV_Quantity

2006-03-01 Thread Thomas Beale
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Pathology numeric values not supported in DV_Quantity

2006-03-01 Thread Gerard Freriks
Thomas, I agree it is very common. But when 5 is reported in essence it means that it is an exception. It is not a precise result. It does not mean that it is less than 5 only. It means that something of an exceptional state in in order. It could be zero, it could be 4.999.. And anything in

Pathology numeric values not supported in DV_Quantity

2006-03-01 Thread Gerard Freriks
Hi, xx or yy What does it mean? To my mind it semantically means a state of exception. Meaning not only that the measurement is xx or yy but that it is unmeasurable. If this reasoning is true than each archetype with a measurement needs an exception attribute. In general this will be true