Re: [Paraview] Numpy import error

2013-03-21 Thread Sohail Shafii
*works since I had to change PYTHON_LIBRARY to point to the "lib" subdirectory of "/Library/Frameworks/Python.framework/Versions/2.7/," similar to the executable and include_dir versions On Thu, Mar 21, 2013 at 10:59 PM, Sohail Shafii wrote: > Importing numpy into python

Re: [Paraview] Numpy import error

2013-03-21 Thread Sohail Shafii
#x27;s Python shell. Any differences? > > On Thu, Mar 21, 2013 at 8:53 PM, Sohail Shafii > wrote: > > Hi, > > > > I have numpy installed installed on Python 2.7.3. for Mac OS 10.8.3. I > > compiled against the same python while building ParaView 3.98.1 64-bit,

[Paraview] Numpy import error

2013-03-21 Thread Sohail Shafii
Hi, I have numpy installed installed on Python 2.7.3. for Mac OS 10.8.3. I compiled against the same python while building ParaView 3.98.1 64-bit, but when I create a Python programmable filter in ParaView, I cannot import numpy -- I get a message that says "ImportError: No module named numpy." Py

Re: [Paraview] ParaView thinks that it does not have a wind blade reader

2013-01-20 Thread Sohail Shafii
Thanks for the help. On Sunday, January 20, 2013, Andy Bauer wrote: > FYI: this finally has made its way into ParaView such that it will be > available in the GUI for single process runs. > > Andy > > On Thu, Dec 20, 2012 at 8:08 PM, Sohail Shafii wrote: > > Thanks. Pl

Re: [Paraview] ParaView thinks that it does not have a wind blade reader

2012-12-16 Thread Sohail Shafii
to work...is there a document somewhere that helps in this regard? I reverted to an older version of VTK for now but I want to eventually upgrade. Sohail On Sat, Nov 3, 2012 at 1:16 PM, Sohail Shafii wrote: > Also I'm removing Jimmy from this list since he may not be working with >

Re: [Paraview] ParaView thinks that it does not have a wind blade reader

2012-11-03 Thread Sohail Shafii
Also I'm removing Jimmy from this list since he may not be working with wind files at this point. Sohail On Sat, Nov 3, 2012 at 1:15 PM, Sohail Shafii wrote: > At this point the changes will have to wait, unfortunately. For the past > two weeks I've been involved with a Topo

Re: [Paraview] ParaView thinks that it does not have a wind blade reader

2012-11-03 Thread Sohail Shafii
27;re getting ready for a pre-release of PV 4.0 now so we'll need this > soon. If we need to update to a newer WindBlade file for the test, we can > do that too. You'll have to think though on how to handle backwards > compatibility. > > Andy > > > On Wed, Oct

Re: [Paraview] ParaView thinks that it does not have a wind blade reader

2012-10-31 Thread Sohail Shafii
x27;ll check on that. > > andy > > > On Fri, Oct 26, 2012 at 5:06 PM, Sohail Shafii wrote: > >> Current master version can't launch (MacOS Mountain Lion): >> >> paraview(575,0x7fff72e33180) malloc: *** error for object 0x111058450: >> pointer being f

Re: [Paraview] ParaView thinks that it does not have a wind blade reader

2012-10-26 Thread Sohail Shafii
e the WindBlade reader when running in either built-in mode or > connecting to a serial server. > > Andy > > On Wed, Oct 24, 2012 at 12:13 PM, Sohail Shafii wrote: > >> >> Haven't had a chance yet due to a paper. I'll look at it this week. How >

Re: [Paraview] ParaView thinks that it does not have a wind blade reader

2012-08-28 Thread Sohail Shafii
adient for that one input (point data) array. That's why it can't compute vorticity or q-criterion because a-scale turbulence is a 1-component array. Might be because I'm using an older version of the repo from late July. Sohail On Tue, Aug 28, 2012 at 11:51 AM, Sohail Shafii wro

Re: [Paraview] ParaView thinks that it does not have a wind blade reader

2012-08-28 Thread Sohail Shafii
Well I guess it's not a problem in the derived functions if I check to see if MPI is available; if not, call the superclass's version of the virtual function. On Tue, Aug 28, 2012 at 11:32 AM, Sohail Shafii wrote: > MPI is only used if it's available. It tries to

Re: [Paraview] ParaView thinks that it does not have a wind blade reader

2012-08-28 Thread Sohail Shafii
So I think that ParaView does something else besides using that reader...hmmm. On Mon, Aug 27, 2012 at 7:32 PM, Andy Bauer wrote: > > > On Mon, Aug 27, 2012 at 6:53 PM, Sohail Shafii wrote: > >> I see...so if MPI is running then it will create a parallel version of >> t

Re: [Paraview] ParaView thinks that it does not have a wind blade reader

2012-08-27 Thread Sohail Shafii
d do the vorticity and/or q criterion > computation on that? > > 3) vtkSMReaderFactory may be the class you're looking for to determine > which reader is getting used. ParaViewReaders.xml has a list of readers > that it will try to read in a file. > > Andy > > > On Tue, Aug 21, 2012

Re: [Paraview] Numpy masking (via programm filter) not quite working in parallel

2012-08-23 Thread Sohail Shafii
Thanks.  I'll look into it and let you know if I have any questions. Sohail From: George Zagaris To: Sohail Shafii Cc: David Thompson ; "paraview@paraview.org" Sent: Monday, August 20, 2012 7:36 PM Subject: Re: [Paraview] Numpy maskin

Re: [Paraview] Numpy masking (via programm filter) not quite working in parallel

2012-08-17 Thread Sohail Shafii
Very well. I think that should be fine for now. Sohail From: David Thompson To: Sohail Shafii Cc: David Thompson ; "paraview@paraview.org" Sent: Friday, August 17, 2012 4:15 PM Subject: Re: [Paraview] Numpy masking (via programm filter) not qui

Re: [Paraview] Numpy masking (via programm filter) not quite working in parallel

2012-08-17 Thread Sohail Shafii
(0.833 for parallel and 0.99 for serial). Will this point sharing information become available in later versions of ParaView? i.e. would it ever be easy to identify and count duplicates? Thanks, Sohail From: David Thompson To: Sohail Shafii Cc: "par

[Paraview] Numpy masking (via programm filter) not quite working in parallel

2012-08-17 Thread Sohail Shafii
Hi, I need to use Numpy in a lot of the programmable filters that I write, and I've run into differences in how its masking feature works in serial and parallel. Masking allows one to filter out portions of an array that do not pass some condition. As an example, I've created a stock paraview

Re: [Paraview] ParaView thinks that it does not have a wind blade reader

2012-07-19 Thread Sohail Shafii
it is the vtkStreamTracer and its distributed counterparts so I can use those as a guide.  If you have better recommendations please let me know. Sohail From: David E DeMarle To: Sohail Shafii Cc: Andy Bauer ; "migic...@gmail.com" ; "p

Re: [Paraview] ParaView thinks that it does not have a wind blade reader

2012-07-19 Thread Sohail Shafii
e in a xml file? Sohail From: David E DeMarle To: Sohail Shafii Cc: Andy Bauer ; "migic...@gmail.com" ; "paraview@paraview.org" ; "Woodring, Jonathan L" Sent: Tuesday, July 17, 2012 7:00 PM Subject: Re: [Paraview] ParaView thinks that it does

Re: [Paraview] ParaView thinks that it does not have a wind blade reader

2012-07-17 Thread Sohail Shafii
Sohail ____ From: David E DeMarle To: Sohail Shafii Cc: Andy Bauer ; "migic...@gmail.com" ; "paraview@paraview.org" ; "Woodring, Jonathan L" Sent: Tuesday, July 17, 2012 12:43 PM Subject: Re: [Paraview] ParaView thinks th

Re: [Paraview] ParaView thinks that it does not have a wind blade reader

2012-07-17 Thread Sohail Shafii
What is the class that is responsible for testing to reader to see if it can open the .wind file? Sohail From: Andy Bauer To: Sohail Shafii Cc: "Woodring, Jonathan L" ; Sebastien Jourdain ; "migic...@gmail.com" ; "paraview@paravi

Re: [Paraview] ParaView thinks that it does not have a wind blade reader

2012-07-11 Thread Sohail Shafii
I'm not aware of any option to build/link against mpi-io.  This is just a standard build with mpi support that suffers from this issue. The ParaView website's builds also have the same bug. From: "Woodring, Jonathan L" To: Sohail

Re: [Paraview] ParaView thinks that it does not have a wind blade reader

2012-07-10 Thread Sohail Shafii
e was a mismatch between that windbladereader and the one in ParaView. Sohail From: Andy Bauer To: Sebastien Jourdain Cc: Sohail Shafii ; "migic...@gmail.com" ; "woodr...@lanl.gov" ; "paraview@paraview.org" Sent: Tuesday

Re: [Paraview] ParaView thinks that it does not have a wind blade reader

2012-07-03 Thread Sohail Shafii
Jimmy said that it works. Thanks. Sohail From: Andy Bauer To: Sebastien Jourdain Cc: Sohail Shafii ; "migic...@gmail.com" ; "woodr...@lanl.gov" ; "paraview@paraview.org" Sent: Tuesday, July 3, 2012 10:09 AM Subject: Re: [

[Paraview] ParaView thinks that it does not have a wind blade reader

2012-07-02 Thread Sohail Shafii
Hi, We are trying to open a .wind data set.  In the open file menu, ParaView lists the .wind format as a possible option.  Once we click open, however, it complains that a reader for that data format cannot be found.  This is true for the compiled-from-source and pre-compiled versions of ParaVi

[Paraview] Compile error for vtkWrapPython (locally installed python)

2012-06-26 Thread Sohail Shafii
Hi, I am currently compiling paraview 3.14.1 and using a locally installed version of python2.7. My version of cmake is 2.8.8. The OS is Red Hat Enterprise Linux Client release 5.8. I get the following error during compilation: [  0%] Built target vtkWrapPythonInit make[2]: *** No rule to make t

Re: [Paraview] vtkDataSet algorithm that takes composite data set as input

2012-01-25 Thread Sohail Shafii
aSet, because it's a composite. I guess I have to override it? Sohail From: David E DeMarle To: Sohail Shafii Cc: "paraview@paraview.org" Sent: Monday, January 23, 2012 7:25 AM Subject: Re: [Paraview] vtkDataSet algorithm that takes composite

Re: [Paraview] vtkDataSet algorithm that takes composite data set as input

2012-01-20 Thread Sohail Shafii
Thanks. I get these sorts of errors: vtkPVCompositeDataPipeline (0x2a831a0): Algorithm vtkFastMarcher(0x2a80860) returned failure for request: vtkInformation (0x339b0f0 Before RequestData is reached... Sohail From: David E DeMarle To: Sohail Shafii Cc

[Paraview] vtkDataSet algorithm that takes composite data set as input

2012-01-20 Thread Sohail Shafii
Hi, I am developing an algorithm that requires a composite data set as input while creating a vtkDataSet as output -- basically it inherit from vtkDataSetAlgorithm. I know that one must provide a new definition to the FillInputPortInformation(int port, vtkInformation *info) function, but I'm no

Re: [Paraview] Data does not load off of a partition from saved (.wind) state

2011-11-21 Thread Sohail Shafii
.  If that doesn't happen then there might be some problem with my paraview installation or my new data set. Sohail ____ From: Sohail Shafii To: David E DeMarle ; Utkarsh Ayachit Cc: "paraview@paraview.org" Sent: Monday, November 21, 2011 10:04

Re: [Paraview] Data does not load off of a partition from saved (.wind) state

2011-11-21 Thread Sohail Shafii
From: David E DeMarle To: Utkarsh Ayachit Cc: Sohail Shafii Sent: Monday, November 21, 2011 7:36 AM Subject: Re: [Paraview] Data does not load off of a partition from saved (.wind) state Probably not. I have the 555MB kitware.wind dataset from Pat Fasel back in 3/2010 and the 124MB test1

Re: [Paraview] Data does not load off of a partition from saved (.wind) state

2011-11-20 Thread Sohail Shafii
bout 600 MB per time step). Sohail ________ From: Sohail Shafii To: "paraview@paraview.org" Sent: Thursday, November 17, 2011 2:52 PM Subject: Data does not load off of a partition from saved (.wind) state Hi, I've noticed that if I open a data set from a separate

[Paraview] Data does not load off of a partition from saved (.wind) state

2011-11-17 Thread Sohail Shafii
Hi, I've noticed that if I open a data set from a separate partition (after mounting it in Linux), and if I save a state file related to said data set, the data does not load at all when I load the statefile if after I start ParaView from a clean state.  Please note that it doesn't matter if th

Re: [Paraview] Linking error when trying to use vtkGLSL/vtkXMLShader

2011-10-27 Thread Sohail Shafii
the title "Visualization Toolkit" pops up when I start my filter.  Now I have to do something with this fragment shader (which currently does nothing). Am I on the right track here? Or I am issuing an improper context? Sohail ____ From: Utkarsh Ayachi

[Paraview] Linking error when trying to use vtkGLSL/vtkXMLShader

2011-10-25 Thread Sohail Shafii
Hi, I am currently trying to do some shader operations in a standard C++ filter.   This filter (inherits from vtkMultiBlockDataSetAlgorithm, resides in VTK/Graphics) will be used to voxelize a polygonal object (basically the result of the contour filter) and write the results to a 3D texture. I

Re: [Paraview] Multiple polydata in same pipeline -- don't always seem centered around same origin

2011-10-12 Thread Sohail Shafii
Thanks. Changing the setting "Coincident Topology Resolution" to "Do Nothing" made it work. Sohail From: David E DeMarle To: Sohail Shafii Cc: "paraview@paraview.org" Sent: Wednesday, October 12, 2011 1:02 PM Subject: Re: [

Re: [Paraview] Accessing OpenGL from standard VTK filter

2011-10-05 Thread Sohail Shafii
) and setting up the view volume (vtkPersp*), so those classes may come in handy Sohail From: Andy Bauer To: Sohail Shafii Cc: "paraview@paraview.org" Sent: Wednesday, October 5, 2011 8:56 AM Subject: Re: [Paraview] Accessing OpenGL from standard

[Paraview] Accessing OpenGL from standard VTK filter

2011-10-04 Thread Sohail Shafii
Hi, If I were to write a typical VTK filter C++ (i.e. the type with VTKRequestData, not existing in the VTK/Rendering folder), would it be fine to have OpenGL calls in there?  I'm guessing based on the way VTK is designed, most classes that access OpenGL directly might exist in the Rendering fo

Re: [Paraview] Comparative view and wind blade reader

2011-08-30 Thread Sohail Shafii
Thank you.  I can wait for this fix to be updated in the release, I guess. Sohail From: Utkarsh Ayachit To: Andy Bauer Cc: Sohail Shafii ; "paraview@paraview.org" Sent: Tuesday, August 30, 2011 8:38 AM Subject: Re: [Paraview] Comparative view and

Re: [Paraview] Unstructured to structured...

2011-08-12 Thread Sohail Shafii
, although that part will take some thought. Sohail From: "Moreland, Kenneth" To: Sohail Shafii ; "paraview@paraview.org" Sent: Thursday, August 11, 2011 4:32 PM Subject: Re: [Paraview] Unstructured to structured... In general, no.  I

[Paraview] Unstructured to structured...

2011-08-11 Thread Sohail Shafii
Hi, I've been wondering: would it be possible to take an unstructured grid using existing filters and make it into structured?  Here's why: I compute an iso-surface for a data set (resulting surface is unstructured subset of original structured data set), which needs to be compared against the

Re: [Paraview] Comparative view and wind blade reader

2011-08-09 Thread Sohail Shafii
I believe Andy should have at least one lying around. Sohail From: Utkarsh Ayachit To: Sohail Shafii Cc: "paraview@paraview.org" Sent: Tuesday, August 9, 2011 11:07 AM Subject: Re: [Paraview] Comparative view and wind blade reader Ah, it's po

[Paraview] Comparative view and wind blade reader

2011-08-09 Thread Sohail Shafii
Hi, I have recently become interested in comparing different time steps using the windblade reader.  One approach involves a 3D comparative view.  After loading my .wind data set, I created a 2X1 Comparative View. In the Comparative View Inspector, I clicked the "+" symbol when "Time" was selec

Re: [Paraview] Accessing field and wind blade data (together) in python filter

2011-07-28 Thread Sohail Shafii
pping and the blade.   This means that I do not have to make any changes in the vtkWindBladeReader code. Sohail From: David E DeMarle To: Sohail Shafii Cc: "paraview@paraview.org" Sent: Thursday, July 28, 2011 9:25 AM Subject: Re: [Paraview] Acce

[Paraview] Accessing field and wind blade data (together) in python filter

2011-07-26 Thread Sohail Shafii
Hi, Right now the field and blade data are separate for the wind blade reader (as expected).  I was wondering if, after creating a python filter below the blade object in the pipeline, I could somehow access the field data?  I'm guessing not based on some experimenting. I need to do this becau

[Paraview] Possible issue with velocity interpolator class

2011-07-25 Thread Sohail Shafii
Hi, I've been developer a vortex core tracer, which is basically a customized version of vtkStreamTracer.  I use the interpolation code quite heavily in the class, in this test case I use the point interpolator (i.e. vtkInterpolatedVelocityField class). Now in one part of the code, I've notice

Re: [Paraview] Interesting bug when using windbladereader and multiple time steps

2011-07-13 Thread Sohail Shafii
By "current development version" are you referring to the master branch? Sohail --- On Wed, 7/13/11, Andy Bauer wrote: From: Andy Bauer Subject: Re: [Paraview] Interesting bug when using windbladereader and multiple time steps To: "Sohail Shafii" Cc: "Pa

Re: [Paraview] Interesting bug when using windbladereader and multiple time steps

2011-07-11 Thread Sohail Shafii
ile); only with .wind and the most up-to-date release version of ParaView as opposed to 3.8.0. Sohail --- On Fri, 7/8/11, Andy Bauer wrote: From: Andy Bauer Subject: Re: [Paraview] Interesting bug when using windbladereader and multiple time steps To: "Sohail Shafii" Cc: "

Re: [Paraview] Interesting bug when using windbladereader and multiple time steps

2011-07-08 Thread Sohail Shafii
n Fri, 7/8/11, Andy Bauer wrote: From: Andy Bauer Subject: Re: [Paraview] Interesting bug when using windbladereader and multiple time steps To: "Sohail Shafii" , "Fasel, Patricia K" Cc: paraview@paraview.org Date: Friday, July 8, 2011, 9:59 AM Ok, I'm able to repli

Re: [Paraview] Interesting bug when using windbladereader and multiple time steps

2011-07-07 Thread Sohail Shafii
windbladereader and multiple time steps To: "Sohail Shafii" Cc: paraview@paraview.org Date: Thursday, July 7, 2011, 7:09 PM I'll take a look at it.  I may need a time dependent data set if I can't figure it out though. Andy On Thu, Jul 7, 2011 at 9:13 PM, Sohail Shafii wrote: Hi, I&#

[Paraview] Interesting bug when using windbladereader and multiple time steps

2011-07-07 Thread Sohail Shafii
Hi, I've noticed a bug when using the windbladereader; the portion of the code that reads the blade file is one timestep behind the code that reads the field.  For instance, if one is at timestep i, the field data will correspond with timestep "i" but the blade data will correspond with the las

Re: [Paraview] Installing Paraview on Ubuntu 10.10

2011-04-17 Thread Sohail Shafii
Also, after you edit your .bashrc file, you have to either launch a new terminal for your edits to take their effect or type in "source .bashrc" in your current terminal. --- On Sun, 4/17/11, Sohail Shafii wrote: From: Sohail Shafii Subject: Re: [Paraview] Installing Paraview on Ub

Re: [Paraview] Installing Paraview on Ubuntu 10.10

2011-04-17 Thread Sohail Shafii
Did you unpack it into the "/opt" folder as specified below? If you type in "paraview" into the command prompt, then it will search folders defined by a $PATH environment variable to run the program/command.  This includes the default locations for most programs, and the command apt-get install

Re: [Paraview] programmable sourece->programmable filter -> streamtracer parallel

2011-04-06 Thread Sohail Shafii
Have you tried to display each parts of the pipeline when in parallel? In other words, see if you can render something related to the programmable source, then the programmable filter, to see if the problem might occur earlier in the pipeline. Sohail --- On Wed, 4/6/11, Atanas Atanasov wrote:

Re: [Paraview] visualizing particles with different radius

2011-03-25 Thread Sohail Shafii
to get all the points to become spheres to become spheres that way. Sohail --- On Thu, 3/24/11, sarai anvari wrote: From: sarai anvari Subject: Re: [Paraview] visualizing particles with different radius To: "Sohail Shafii" Date: Thursday, March 24, 2011, 8:23 AM thanks but as

Re: [Paraview] Getting a raytraced picture from Manta

2011-03-23 Thread Sohail Shafii
Thanks, that works. Sohail --- On Wed, 3/23/11, John Patchett wrote: From: John Patchett Subject: Re: [Paraview] Getting a raytraced picture from Manta To: "Sohail Shafii" Cc: "Sebastien Jourdain" , "David E DeMarle" , paraview@paraview.org Date: Wednesda

Re: [Paraview] visualizing particles with different radius

2011-03-23 Thread Sohail Shafii
So in the glyph filter's "Vectors" drop-down you see the two types and you want it applied to both?  If that's the case then I would add a second glyph filter into the pipeline, and have it applied to the other type. As far as I know each glyph filter can be applied to only one input vector from

Re: [Paraview] Getting a raytraced picture from Manta

2011-03-22 Thread Sohail Shafii
ns my filter created, I think that would be seen by default. Any ideas? Sohail --- On Tue, 3/22/11, David E DeMarle wrote: From: David E DeMarle Subject: Re: [Paraview] Getting a raytraced picture from Manta To: "Sebastien Jourdain" Cc: "Sohail Shafii" , paraview@paraview.or

Re: [Paraview] Getting a raytraced picture from Manta

2011-03-22 Thread Sohail Shafii
The plugin's a bit buggy and causes a crash, however, and I think that may be due to the fact that I am using an older version of Manta. Sohail --- On Tue, 3/22/11, Sebastien Jourdain wrote: From: Sebastien Jourdain Subject: Re: [Paraview] Getting a raytraced picture from Manta To:

[Paraview] Getting a raytraced picture from Manta

2011-03-22 Thread Sohail Shafii
Hi, I have been able to get Manta raytracer to compile with paraview and load in as a plugin.  I even see the extra GUI options in the "display" tab of certain filters like the Tube filter.  I'm just wondering how to get something raytraced as a result. I did a bit a research via the list and

Re: [Paraview] Using streamtracer/gradient filters on "multi-block" data set

2011-03-09 Thread Sohail Shafii
, I wouldn't face any issues.  But for some reason I still do -- maybe that requirement is unfulfilled? If anyone has any ideas, please let me know. Sohail --- On Wed, 3/2/11, Sohail Shafii wrote: From: Sohail Shafii Subject: Re: [Paraview] Using streamtracer/gradient filters on "

Re: [Paraview] Using streamtracer/gradient filters on "multi-block" data set

2011-03-02 Thread Sohail Shafii
t; data set To: "Sohail Shafii" Cc: paraview@paraview.org Date: Wednesday, March 2, 2011, 3:40 AM I looks like you to apply cell data to point data. On Tue, Mar 1, 2011 at 9:06 PM, Sohail Shafii wrote: Hi, Let me correct myself; the block contained inside is a vtkStructuredGrid.  I

Re: [Paraview] Using streamtracer/gradient filters on "multi-block" data set

2011-03-01 Thread Sohail Shafii
n the gaps. Sohail --- On Tue, 3/1/11, Berk Geveci wrote: From: Berk Geveci Subject: Re: [Paraview] Using streamtracer/gradient filters on "multi-block" data set To: "Sohail Shafii" Cc: paraview@paraview.org Date: Tuesday, March 1, 2011, 5:07 PM By any chance, does

[Paraview] Using streamtracer/gradient filters on "multi-block" data set

2011-03-01 Thread Sohail Shafii
Hi, I've read in a CAS file, which Paraview read in a Multi-block dataset, which contains within it a unstructured grid. Initially I had a problem where all of the data items were one-tuple arrays.  So I created a UVW (3-tuple velocity) array and added it to the pipeline this way using a Pyth