[Histonet] old bones

2012-07-25 Thread Louise Renton
Thanks all for suggestions ... as always you guys rock!

Sadly, this may almost be my last post - after close to 30 years in the
lab, I'm moving into another arena all together - environmental health! So
this may well be farewell to all you great guys and gals who have provided
help and advice over the years

-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
Question: Are rhinos  overweight unicorns?
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[Histonet] Thanks for all the good wishes

2012-07-25 Thread Louise Renton
AlsoI'll try to get the UNSUSCIBE UNSCRIBE UNSUSCRIBE  thingy
right when the time comes!

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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
A good head and a good heart are always a formidable combination.
Nelson Mandelahttp://www.brainyquote.com/quotes/quotes/n/nelsonmand101682.html
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[Histonet] techniques for archaeological bone

2012-07-24 Thread Louise Renton
Hi all...

Had someone in here who is interested in sectioning old bones - any ideas
as to what would be the best embedding medium? These are bones from a
graveyard more than 100 years old - not fossils.

Decal is out of the question - so it would have to be a resin of some sort.
Tips, ideas, contacts  and methods would be very welcome at this stage

-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
Question: Are rhinos  overweight unicorns?
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[Histonet] Klinipath coverslipper

2012-06-21 Thread Louise Renton
Hello Histoworld!

Has anyone used the Klinipath coverslipper? I am thinking of buying one and
was wondering how it compares to the Sakura tape coverslippper.

Thank you

-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
Question: Are rhinos  overweight unicorns?
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[Histonet] 101 steps to better histology

2012-04-19 Thread Louise Renton
Hi all,

Just thought I'd share this with y'all. I have just received a booklet
 from Leica Microssytems  101 steps to better histology, which i think is
an excellent overview and ready reference for practical histology. It has
great photos of common problems such as sections contaminated with squames,
incomplete blueing, bubbles in sections etc.

Disclaimer: This is my personal opinion. I have no interests in Leica other
than  purchasing their equipment now and then

-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
Question: Are rhinos  overweight unicorns?
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Re: [Histonet] Thank you

2012-04-12 Thread Louise Renton
there's always good old pencil (HB) as a backup

On Thu, Apr 12, 2012 at 12:05 AM, Patsy Ruegg pru...@ihctech.net wrote:

 The best markers I have ever used are called KP Markers, they were off the
 market for a while, but they are back and we get them from Mercedes
 Medical,
 just got a new batch and they are wonderful just like the old KP markers,
 we
 won't have anything else in the lab.

 Patsy Ruegg, HT(ASCP)QIHC
 IHCtech
 12635 Montview Blvd. Ste.215
 Aurora, CO 80045
 720-859-4060
 fax 720-859-4110
 www.ihctech.net
 www.ihcrg.org


 -Original Message-
 From: histonet-boun...@lists.utsouthwestern.edu
 [mailto:histonet-boun...@lists.utsouthwestern.edu] On Behalf Of Tim
 Wheelock
 Sent: Wednesday, April 11, 2012 2:43 PM
 To: histonet@lists.utsouthwestern.edu
 Subject: [Histonet] Thank you

 Hi Everyone:

 I want to thank everyone who gave me advice concerning my cassette
 labeling problem.
 I am trying out three different types of markers pens: StatLab, Leica,
 and NewComer Supply Histo-tec brands.
 We will also make sure to let the ink dry before putting the cassettes
 into formalin.
 If we still have a problem, we will experiment with a different cassette.
 Thanks again.

 Tim Wheelock
 Harvard Brain Bank
 McLean Hospital
 Belmont, MA
 617-855-3592

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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
Question: Are rhinos  overweight unicorns?
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Re: [Histonet] GLASSWARE CALIBRATION

2012-03-28 Thread Louise Renton
1ml of water =1g mass. could you use this to determine the degree of error
between calibration and real volume?

On Wed, Mar 28, 2012 at 10:51 AM, shehnaz khan shehnazs...@gmail.comwrote:

 Hi netters,

 Could someone please shed some light:

 1. How is calibration for glassware performed on non-Class A glassware?

 2.  If Class A glassware is used but no certificate is located - does
 it still require calibration?

 Thanx again.

 S Kahn

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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
Question: Are rhinos  overweight unicorns?
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Re: [Histonet] Goldner's Trichrome for Osteoid

2012-03-08 Thread Louise Renton
As far as i know, osteoid will not show up on  a decalcified section.

On Thu, Mar 8, 2012 at 6:00 PM, Grantham, Andrea L - (algranth) 
algra...@email.arizona.edu wrote:

 Hopefully a hard tissue guru is out there and can help with this.

 A PI here is asking about doing a Goldner's stain on mouse femur. I'm not
 set up to cut sections of undecalcified bone so my questions are:
 1. can this stain be done successfully on decalcified bone?
 2. if so, what type of decal should be used - EDTA?
 3. I have googled the stain but didn't see what the preferred thickness
 was for this stain.

 Need this info fairly soon! The bones are on the way.

 Thanks!!!

 Andi G.
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Bone Research Unit
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Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
Question: Are rhinos  overweight unicorns?
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Re: [Histonet] Regarding Bone-Implant Contact Percentage

2012-02-14 Thread Louise Renton
Hi how are you hoping to quantitate? do you have a software programme?

Our latest paper on titanium implants (in press) measure BIC expressed as a
percentage of implant surface examined.

On Mon, Feb 13, 2012 at 1:57 PM, ragamouni sravanthi 
ragamouni.sravan...@gmail.com wrote:

 Hai,...
 Can any one help me with how to calculate percentage of bone-implant
 contact with implants in bone sections.
 Please can you anyone give me detailed explanation and the required
 equation.Ineed it in urgency.




 With Regards
 R.Sravanthi
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Bone Research Unit
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Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
Question: Are rhinos  overweight unicorns?
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Re: [Histonet] Interview Questions

2012-01-25 Thread Louise Renton
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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
Question: Are rhinos  overweight unicorns?
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Re: [Histonet] Music in the Laboratory

2012-01-17 Thread Louise Renton
I think there is nothing worse than being forced to listen to music that
you don't like or enjoy. If the person works alone, then fine, they can
listen to what they want within reason, but if there are others well then,
one has to be considerate. Check with yr safety guys as to whether mp3
players s with headphones are allowed.

my 2 c worth



On Wed, Jan 18, 2012 at 4:37 AM, tracz...@aol.com wrote:

 Greetings.
 I would like to know what other histology laboratories allow for music
 players while working.  Do you have formal policies about music content or
 volume?  Do you allow lab space doors to remain closed to muffle the
 volume  of
 what is being played?  Are headsets allowed?
 I am a terrible judge of this because I personally prefer to work in a
 quiet environment.  I am trying to be open minded, as long as the work gets
 done.  However, one of the techs had a song playing today that I  believe
 was
 inappropriate for general listening in the lab.  Am I just out  of touch?
 Is that dang F word just something I'm going to have to learn  to accept?
 Do you have a written policy?  When/how/why was it  implemented?
 I should mention that it's a small private lab, with minimal patient
 traffic.  We do see our share of FedEx, UPS, sales  service  reps.
 Your ideas on this is very much appreciated.
 Dorothy
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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
Question: Are rhinos  overweight unicorns?
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Re: [Histonet] clostridium and bacterial spores in tissue sections

2012-01-16 Thread Louise Renton
I used to flame tissue sections regularly when doing a ZN for TB...a wisp
of cotton wool held in forceps, dipped in alcohol and lit with  a match. A
few quick passes under the slide and bob's yr uncle. worked fine, until the
day came that I ignited some acetone fumes in the sink and fireballed my
eyebrows off!

Gentle heating in a incubator also works

On Sat, Jan 14, 2012 at 8:34 PM, Rene J Buesa rjbu...@yahoo.com wrote:

 When I was in pre-medical (59 years ago, imagine!) we used the same stain
 you are referring to that involved Ziehl-Nielsen and light green as counter
 stain with heat, so much heat, that a flame has to be applied to dry the
 smears.
 In Peter Gray's book there are about 40 methods described,none for tissues.
 I am not sure a tissue section will survive, but, why not, just try it,
 and let us all know.
 René J.

 --- On Sat, 1/14/12, Elizabeth Chlipala l...@premierlab.com wrote:


 From: Elizabeth Chlipala l...@premierlab.com
 Subject: [Histonet] clostridium and bacterial spores in tissue sections
 To: histonet@lists.utsouthwestern.edu histonet@lists.utsouthwestern.edu
 
 Date: Saturday, January 14, 2012, 12:58 PM


 Hello everyone

 I need a bit of help.  I have to stain for clostridium and bacterial
 spores in tissue sections.  I have come across a few references to staining
 these on smears but not on tissue sections.  I did find one reference that
 used Ziehl-Neelsen to stain terminal spores from clostridium tetani.  Does
 anyone out there know if the stain they use in microbiology for smears will
 work on tissue sections?  Any advice would be appreciated.

 Thanks in advance

 Liz

 Elizabeth A. Chlipala, BS, HTL(ASCP)QIHC
 Manager
 Premier Laboratory, LLC
 PO Box 18592
 Boulder, CO 80308-1592
 (303) 682-3949 office
 (303) 682-9060 fax
 (303) 881-0763 cell
 www.premierlab.comhttp://www.premierlab.com

 Ship to address:

 1567 Skyway Drive, Unit E
 Longmont, CO 80504

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-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
Question: Are rhinos  overweight unicorns?
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Re: [Histonet] difficult cross section to cut

2012-01-10 Thread Louise Renton
Hi Peggy
1. I have found that to cut  bone the block has to be REALLY cold. Face
block with increased knife angle as suggested by Rene, and then place in
freezer overnight - then try sectioning
2. Try surface decalcification of your block overnight in whichever soln.
you normally use.
3. Section at 4-6 microns
4. You do not say, but high profile disposables work better with bone than
low profile
5, failing this, you could try dewaxing and re decalcifying for a few more
days

good luck



On Tue, Jan 10, 2012 at 7:35 PM, DiCarlo, Margaret 
mdica...@kaleidahealth.org wrote:

 Histonetters,



 I was given a cross section (3.5 x 3.2 x 0.6 cm) and a portion of a
 femur that they think is osteoporotic.  After decaling the cross section
 of the femur in 10% formic acid for 12 days, processing using xylene and
 embedding in Tissue Prep 2, I have been unsuccessful in attaining a
 section.  The knife just skips over the bone.  I have soaked the bone
 with a 50/50 solution of fabric softener and still can't get a section.
 Does anyone have any suggestions?



 Thank you.



 Peggy DiCarlo HT (ASCP)

 Orthopedic Bone Lab

 Buffalo General Hospital

 Buffalo, NY  14203

 716-859-1293





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Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
Question: Are rhinos  overweight unicorns?
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Re: [Histonet] pouring of liquid nitrogen into a cryostat

2011-10-14 Thread Louise Renton
bad idea - what about splash ups from the chamber? Very scary to contemplate

On Fri, Oct 14, 2011 at 6:36 PM, Kaye Ryan kr...@nfderm.com wrote:

 Hi Everyone,

 Has anyone ever heard of pouring liquid nitrogen into the chamber of a
 cryostat that has warmed up to help cool it down more quickly?  Does
 this do harm to the chamber or mechanisms of the cryostat?  Any
 information would be appreciated.



 Thanks

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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
Question: Are rhinos  overweight unicorns?
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Re: [Histonet] Regarding cartilage and bone staining

2011-10-12 Thread Louise Renton
Hi Pathik,

perhaps you could give us some background on what it is you are researching?

On Tue, Oct 11, 2011 at 11:01 PM, Kraniofacial Biology 
kraniofacialbiol...@gmail.com wrote:

 Hello Histonetters
 I am new to this site. I am a clinician and very fresh to research. I was
 doing whole mount cartilage and bone staining of whole head of mice and was
 surprised to see whole mouse head being used for experiment. I was
 wondering
 if there is any other staining method which can be used in place of the
 whole mount cartilage and bone staining that would stain the sections on a
 slide and works on cartilage and bone. This would also save the whole mouse
 to be used and many slides can also be used for other experiments.
 Regards
 Pathik
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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
Question: Are rhinos  overweight unicorns?
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[Histonet] decal [sic] question

2011-10-05 Thread Louise Renton
funny, I thought a decal was a sort of transfer for decorating things with
 - like guitars and hot rods - what others call stickers hard to trademark
a word like that!

On Tue, Oct 4, 2011 at 5:38 PM, Bob Richmond rsrichm...@gmail.com wrote:

 Bernice Frederick HTL (ASCP), Senior Research Tech at the  Pathology
 Core Facility of the  Robert. H. Lurie Cancer Center at Northwestern
 University in Chicago notes

 Ann Preece states acid decal uses aqueous solutions of either formic,
 nitric, or trichloroacetic acid. Other methods mentioned are Ion-exchange
 resin, electrical ionization and chelation. The histo bible!

 You've got to be almost as geezer as me to remember when Ann Preece's
 A Manual for Histologic Technicians was the histo bible. I was
 fortunate to be able to purloin a pristine (no stain spills) copy of
 the third edition (1972) from the wreckage of an old histology lab
 about 20 years ago.

 Indeed, Patsy Ruegg! Decal is a trademark of the Decal Chemical
 Corporation and should not be used generically for decalcifying
 solutions. See decal-bone.com

 Bob Richmond
 Samurai Pathologist
 Knoxville TN

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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
Question: Are rhinos  overweight unicorns?
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[Histonet] ACD RNAscope

2011-08-30 Thread Louise Renton
Hi all - is anyone using the above system for RNA detection in FFPE tissues
- it sounds almost too good to be true?

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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
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[Histonet] in situ for mRNA - refresher course?

2011-08-29 Thread Louise Renton
Hi all,

after more than a decade away from the bench  I  have been asked to start
doing ISH on cryosections for BMPs and TGFbetas (mRNA) . I desperately need
some guidance - even an offer to training me.  i don't even know waht type
of probes have been developed in the interim.  I am sure I can get some
funding for a couple of days overseas..

Of course, vendors with local representation  are welcome to contact me.  I
look forward to a HUMUNGOUS response

regards
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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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[Histonet] cadaveric bone

2011-08-19 Thread Louise Renton
Hi all - a somewhat morbid question for the weekend. A student in the
anatomy dept came to me with wax embedded samlpes of demineralized
bone from dissection cadavers. The bone is very flinty and difficult
to section. Is this perhaps due to the preseravation/embalming process
that the bodies undergo? Is there something I can do to alleviate this
problem prior to processing?

I have tried  dewaxing and furher demineralization, but the problem
sems to be in the matrix itself--

BTW, using my usual protocol I ahv been able to section elephant tusk
- so I think the prob is the bone rather than what I am doing to it


best love  haev a great weekend

Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.

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Re: [Histonet] protocol for in situ RT_PCR

2011-08-16 Thread Louise Renton
hi could you add me on too pelase?

On Mon, Aug 15, 2011 at 11:09 PM, Barone, Carol cbar...@nemours.org wrote:

 Anyone got a hot protocol for In situ RT-PCR? Haven't done one in 5
 years (on my Perk and Elmer)...Know there must be some great new
 reagents and kits out there...opinions? Send to cbar...@nemours.org. Thx
 CB
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Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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Re: [Histonet] accidentally frozen samples

2011-05-20 Thread Louise Renton
Probably the bone staining will be OK - how about sending the student to the
arctic circle for a few days in winter? - that may be a good lesson about
not freezing tissues. Just kidding :-)

On Fri, May 20, 2011 at 9:24 AM, Tora Bardal tora.bar...@bio.ntnu.nowrote:

 One of our students accidentally put his samples in the freezer after
 formaldehyde/glutardialdehyde/PBS fixation. The samples (fish very early
 stage, of course rare species) were meant for LM/EM morphology studies.
 Good morphology is out, but is there a chance he can do cartilage/bone
 staining? Or do we need to send him abroad for new sampling at the next
 spawning time?


 Tora Bardal

 Senior Engineer
 NTNU Center of Fisheries and Aquaculture


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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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Re: [Histonet] (no subject)

2011-05-11 Thread Louise Renton
could they possibly mean a H pylori? associated with gastric ulcers

On Tue, May 10, 2011 at 3:47 PM, Rene J Buesa rjbu...@yahoo.com wrote:

 The so called reflux is a symptom of a gastric condition and, as such,
 cannot be detected by HC or IHC. Perhaps a gastric biopsy could reflect an
 anatomical alteration that accompanies it but cannot measure. Have your
 pathologists seriously consider this issue?
 René J.

 From: Dorothy Glass techman...@yahoo.com
 To: Histonet@lists.utsouthwestern.edu
 Sent: Monday, May 9, 2011 8:50 PM
 Subject: Re: [Histonet] (no subject)

 What is an IHC stain for gastric reflux. Pathologists are wanting to start
 using
 the procedure. Can anyone help?
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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
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Re: [Histonet] Question about delayed start in Leica Tissue Processor

2011-04-19 Thread Louise Renton
The easiest way to remember is to count the midnights between starting and
ending - therefore today will be 0, tomorrow 1etc

On Mon, Apr 18, 2011 at 6:24 PM, Jenny Vega histotech...@gmail.com wrote:

 Yes, that is what makes sense to me. Tomorrow morning after removing the
 specimens from the tissue basket I will check how my supervisor set the
 clock last Friday. If she chose 3-18:20, then by logic I will have to chose
 4-18:20, since I will be away for the holidays  for 4 days straight and I
 need the tissues to be processed by the next monday (april 25). I was told
 that the tissue processor starts at 6pm and it is done the next morning. I
 did not understood military time before and now I know that 18:20 means
 6:20pm.

 Thanks

 On Mon, Apr 18, 2011 at 8:39 AM, Thomas, Nancy n...@stowers.org wrote:

  We have the same processor.  If you are returning to work next Monday
  morning, then you would choose the 4 day delay.  It would begin
 processing
  at 18:20 Sunday night and be ready on Monday morning.
  Nancy Thomas
  Stowers Institute
 
  -Original Message-
  From: histonet-boun...@lists.utsouthwestern.edu [mailto:
  histonet-boun...@lists.utsouthwestern.edu] On Behalf Of Jenny Vega
  Sent: Sunday, April 17, 2011 8:52 PM
  To: histonet@lists.utsouthwestern.edu
  Subject: [Histonet] Question about delayed start in Leica Tissue
 Processor
 
  Hello. I have little experience using the tissue processor from my lab
  which is an old version of the Leica  TP1020. I was taugh that since on
  weekends the processor is not going to be used then you have to set up
 the
  days of delay for example 2-18:20 (2 represents saturday and sunday). On
  Monday
  (tomorrow) I have the day off, so the processor won't be used. When I
 come
  back on Tuesday I have to change the the time as 0-18:20 so that the
  processor starts working that day and on wednesday. On thursday, friday,
  saturday and Sunday will also have the days off. I am confused because my
  supevisor told me to set the time as 3-18:20 next Wednesday, and since I
  will not be working in the lab for 4 days straight that does not make
 sense,
  it is suppose to be 4-18:20 instead. I think she made a mistake telling
 me
  that since maybe she confused the program of this week when the processor
  was programmed as 3-18:20 because used for 3 days straight (saturday to
  monday). My supervisor won't be in the lab next week so I cannot ask her.
 
  This question seems silly but I want to be sure. I know that if tissue is
  left for a long time in paraffin the tissue can get over-harden and I
 don't
  want to program de delayed start as 3-18:20 thinking it is the correct
 way
  when is not.
 
  Thanks
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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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[Histonet] in situ buffer??

2011-02-01 Thread louise renton
Greetings, Oh mighty histonetters!

As per previous posts I am re-embarking on doing in situ hybridization. I
will be using (hopefully) DIG labelled oligo probes, and ultimately
visualizing with DAB.

My question isare there a commercially available hybrizidation buffers?
looking at the extensive list of ingredients it would be far easies (and
cheaper) to get ready made stufff

best regards
-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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[Histonet] in situ - thanks 1 more query

2011-01-24 Thread louise renton
Hi all, just wanted to say thanks for all the info received. L
Looking through the protocols it appears that i need an anti-DIG antibody,
preferably HRP labelled - any suggestions as to supplier? I remember using
one from DAKO, but don't see it in the latest catalogue. Please - any
sugestions as to where I can get it?

Thanks again - you guys (and gals) rock!!



-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
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[Histonet] in situ methodology part 2

2011-01-23 Thread louise renton
Hi all

just as clarification .i need to brush up on my background of ISH - what
new products/methododolgies there might be on the market. The tissues I will
be using will either be rodent pups/embryos or formalin fixed/fresh adult
tissue.

As for the probe - thats a stick point - not enough background information
to decide - but probably oligos.

So...the questions still stand:

   - where can i find good on-line material
   - Who offers the best application manuals - is Roche still int he market?

best regards

-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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[Histonet] in situ hybridization

2011-01-20 Thread louise renton
Hi all,

after a decade of not doing ISH, I have been asked to initiate a project in
our department. needless to say i am VERY rusty. can any one suggest:

   - a good on-line resource to brush up my knowledge
   - a company that have reference materials/handbooks etc (I seem to recall
   Roche did this)?
   - A course/workshop that i can attend specifically on embryo and bone in
   situ?

As always i thank the forum for its help

best regards

-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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[Histonet] cryojane slide residue

2011-01-18 Thread louise renton
Hello alll!

I am just starting to learn about cutting cryojane sections. I was given a
sample of starfrost 4x and 5x as part of the installation. It is my
understanding that these are moreadhesive than the ordinary snowcoat
slides. HOWEVER, when i used these i noticed that there was a residue on the
slide that stained up with eosin in a rather messy way. Is this normal? Can
I get rid of it somehow?

AlsoI am trying to cut sections of hydroxy apatite bone substitute on
the cryostat. Even with the tape transfer method the implant disintigrates -
is there any way to prevent this?

looking forward to some answers

best regards

-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
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Re: [Histonet] Slide Labeling System that Survives Citrate Boiling

2011-01-05 Thread louise renton
long ago there was a cute system that worked with superfrost type
slides - you know the ones that have the sort of coloured ends -
etched through the paint to make a permanent marking

Common HB pencil also survives on ordinary frosted slidesand
surgipath pen marking  esp if used on superfrost slides

On 1/6/11, Cameron Nowell cameron.now...@ludwig.edu.au wrote:
 Hi List,



 I am looking for a slide labelling system to print labels for our
 research histology samples that will survive pretty much anything we
 throw at it. There seems to be lots of choices out there for chemical
 resistant labels but i can't seem to find much on ones that are
 resistant to antigen retrieval like citrate boiling. I have searched
 google and the histonet archives and the best i can find is a reference
 to General Data having some that may do the job. Does anyone out there
 have any more info or are you using someting that works well?



 Thanks



 Cam







 Cameron J. Nowell
 Microscopy Manager
 Centre for Advanced Microscopy
 Ludwig Institute for Cancer Research
 PO Box 2008
 Royal Melbourne Hospital
 Victoria, 3050
 AUSTRALIA

 Office: +61 3 9341 3155
 Mobile: +61422882700
 Fax: +61 3 9341 3104

 Facility Website http://www.ludwig.edu.au/confocal/







 This communication is intended only for the named recipient and may contain
 information that is confidential, legally privileged or subject to
 copyright; the Ludwig Institute for Cancer Research Ltd does not waive any
 rights if you have received this communication in error.
 The views expressed in this communication are those of the sender and do not
 necessarily reflect the views of the Ludwig Institute for Cancer Research
 Ltd.

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Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.

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[Histonet] Frozen section ...HELP

2010-11-08 Thread louise renton
Hi all,

after more than a decade of NOT cutting frozen sections, I find myself
back at the ice-face.
To get my hand in (not literally) I thought I would do some trial
sections on stored tissue - stuff that was in formalin and now in 70%
alcohol.

Horror ; dismay. The tissue, once frozen, is all mushy in the middle.
Is this because of teh long storage?

is there anything I can do to improve the situation?

much appreciated

-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.

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Re: [Histonet] Nitroblue Tetrazolium Chloride

2010-10-29 Thread louise renton
I used to do a stain on post mortem heart slices to look for recent
infarctions. the entire tissue turned a sort of bluey colour which remained
through formain fixation and processing. the tissue however was incubated in
 solution of NBT in a sodium cyanide containing buffer - not sure if that
would still be allowed these days - but if you want - i could send you the
protocol we used

best regards

On Thu, Oct 28, 2010 at 8:51 PM, Laurie Colbert 
laurie.colb...@huntingtonhospital.com wrote:

 I previously posted a question regarding Nitroblue Tetrazolium Chloride,
 but I didn't really receive the info that I needed - so I thought I
 would ask again.



 I need to purchase this item for a research doc.  He wants to immerse
 tissue in this solution for 24 hours and then process as usual.  It is
 my understanding that this is some kind of dye.  I see that I can order
 it from Sigma in tablet form.  I've seen it from other companies in a
 powder form.



 Has anyone ever used this reagent in the capacity that I describe?  Is
 it available as a ready-to-use solution/liquid?  Is there a certain
 strength/percentage that I should use?



 Thanks,

 Laurie Colbert

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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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[Histonet] histomorphometry - clarified

2010-10-01 Thread louise renton
Dear all,

just to clarify issues here - i have a histomorphometry analysis system -a
very nice one, and  i sort of know how to use it - what i DON'T know is what
sort of measurements i should be doing. So thanks to all who suggested
systems, i'm sorry if my initial e-mail was not all that clear.

further commentary on WHAT to measure and what parametres are useful will be
welcomed

best regards

On Fri, Oct 1, 2010 at 12:12 PM, Katie McKinley katie.mckin...@i-path.co.uk
 wrote:

 Dear Louise,

 We have software which not only will allow the easy measurement of slides
 but also the management of your images.  We specialize in whole slide
 scanning software, We can scan your slides and your images are saved on our
 network of servers and can be accessed online using secure login details.
 Because the software is online you can access your images from any
 location.
 The scan can be treated like a glass slide.  You can zoom in to diagnostic
 resolution and pan around the whole slide and move through the layers.
 As well as measurements, you can annotate the slide, build up archives and
 banks of information and share with colleagues around the world instantly.
 We are currently in beta testing of our off the shelf imaging analysis
 software, but we do work on a consultancy basis to create analysis
 algorithms to suit our clients' needs specifically.

 Please visit our website for more info. www.i-path.co.uk

 Kind Regards

 Katie

 -Original Message-
 From: Wagner, Richard [BUL/LAK] [mailto:richard.wag...@buehler.com]
 Sent: 28 September 2010 21:48
 To: louise.ren...@gmail.com
 Cc: histonet@lists.utsouthwestern.edu
 Subject: FW: [Histonet] histomorphometry

 Louise:

 Versatile image analysis software like OmniMet can solve this problem.
 Powerful digital image acquisition, object and field measurement
 options, and counting tools are standard features of the software.
 http://www.buehler.com/productinfo/biomedical/ia.htm

 Regards,
 Rick Wagner

 -Original Message-
 From: histonet-boun...@lists.utsouthwestern.edu
 [mailto:histonet-boun...@lists.utsouthwestern.edu] On Behalf Of Jack
 Ratliff
 Sent: Tuesday, September 28, 2010 8:36 AM
 To: louise renton
 Cc: Histonet@lists.utsouthwestern.edu
 Subject: Re: [Histonet] histomorphometry

 At the NSH this year, just this last Sunday in fact, Dr. Tony Villanueva
 demonstrated this very technique in his workshop. My best advice would
 be to contact him directly (avillanuev...@cox.net) and see what he can
 do for you. Another option would be to contact an image analysis vendor
 like BIOQUANT (nathan...@bioquant.com). Hope this information helps!

 Regards,

 Jack

 On Sep 28, 2010, at 3:25 AM, louise renton louise.ren...@gmail.com
 wrote:

  Hi all,
 
  I desperately need some advice from an experienced
 histomorphometristI
  am trying to translate the old cumbersome visual measurement of using
 an
  eypiece grid and doing point counting to an easier computer system -
 but I
  am not sure how to do it - any help out there?
  --
  Louise Renton
  Bone Research Unit
  University of the Witwatersrand
  Johannesburg
  South Africa
  +27 11 717 2298 (tel  fax)
  073 5574456 (emergencies only)
  There are nights when the wolves are silent and only the moon howls.
  George Carlin
  No trees were killed in the sending of this message.
  However, many electrons were terribly inconvenienced.
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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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Re: [Histonet] Blade sharpening service

2010-09-28 Thread louise renton
Delaware do ours and they're cheaper than leica

On Mon, Sep 27, 2010 at 9:47 PM, Collette, Nicole M. collet...@llnl.govwrote:

 Hello, esteemed colleagues,

 I am in need of a service to have my 16cm tungsten carbide Profile D
 (a.k.a.
 Sweeney Todd) blades resharpened. Can anyone recommend a service that is
 relatively accessible to the West coast? I looked in the archives and
 couldn't find any recent posts, and my Googling has been unproductive. I'd
 rather not send them back to Leica in Germany to have them sharpened if I
 don't have to.

 Thanks for all your help!

 Sincerely,
 Nicole Collette
 UC Berkeley/Lawrence Livermore National Lab


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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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[Histonet] histomorphometry

2010-09-28 Thread louise renton
Hi all,

I desperately need some advice from an experienced histomorphometristI
am trying to translate the old cumbersome visual measurement of using an
eypiece grid and doing point counting to an easier computer system - but I
am not sure how to do it - any help out there?
-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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Re: [Histonet] Cutting Microarrays

2010-09-20 Thread louise renton
hi, this sounds like the tissue was too cool when embedded in the wax - so
it has not made a nice homogenous block that cuts as one. Can u re-embed?

On Mon, Sep 20, 2010 at 10:54 AM, Rae Staskiewicz raest...@grics.netwrote:



 Good Morning All,



 I am having some issues when cutting a microarray containing 4mm punches.
 The punches are rolling and separating from the paraffin during cutting.
 Anyone have any tips or ideas??



 Rae Staskiewicz

 MMCI

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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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Re: [Histonet] filtering cytology stains

2010-09-16 Thread louise renton
Hi - why not look at something like a millipore (millivex) syringe filter?
This website has the application choice on it - or perhaps speak to your
Millipore rep?

http://www.millipore.com/techpublications/tech1/pb1951en00


On Wed, Sep 15, 2010 at 6:49 PM, Brandi Higgins brandihigg...@gmail.comwrote:

 Hello All,

 I was wondering how you are filtering your cytology stains.  We are a
 relatively small lab, so we have been gravity filtering our cytology
 stains,
 but as we are getting busier with a larger volume of slides, especially
 fna's this is becoming a very time consuming process.  I think vacuum
 filtration would be almost as lengthy a process.
 It was suggested that we look into getting some 200ml syringes that can
 come with an attached filter to suck in and pump out the fluid for faster
 filtration...is anyone using such a process?  If so, do you have product
 names/numbers for the filters or the syringes.  If anyone has another
 method
 they are using I would like to hear any suggestions.

 Thanks in advance for you input,
 Brandi Higgins, BS, HT(ASCP)
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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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Re: [Histonet] shrinkage

2010-08-25 Thread louise renton
I seem to remember a good discussion in this in the following book:. L. P.
Kok and M. E. Boon. *Microwave Cookbook for Microscopists*, Coulomb Press
Leyden, Leiden (1992) p. 1–432 .

Whetehr or not it is still available is another matter

On Tue, Aug 24, 2010 at 5:17 PM, Edwards, Richard E.
r...@leicester.ac.ukwrote:


 Anybody aware of the degree of shrinkage in paraffin processed tissues
 and/or GMA processed tissues?, many thanks.

 Cheers
  Richard  Edwards

  Leicester University.

  Leicester  U.K.

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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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Re: [Histonet] how to make crashed ice?

2010-08-07 Thread louise renton
Hi gudrun,

Place the ice - ice cubes works best in a plastic bag, wrap in a towel and
bash with a heavy object like a hammer. You can also use Jamie Oliver's
trick - put ice cubes in a cloth tea towel, , bring the  4 corners together,
tie them in knot, and then hit the parcel on the edge of your work surface
until the ice is the sze you need

hope this helps

On Sat, Aug 7, 2010 at 12:12 PM, Gudrun Lang gu.l...@gmx.at wrote:

 Hi!

 I think this is a rather basic question ;-), but I'm looking for practical
 advice.

 We are going to try the OSNA-test for sentinel nodes. The application needs
 a pot with crashed ice while desintegrating the tissue with a mixer. So
 over
 the day this should be four to six litre ice, if we have to take fresh ice
 for each time, a group of sentinels has to be worked up.



 What is a practical way to make crashed ice in the lab?

 Thanks for your answers in advance!

 Gudrun

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Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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Re: [Histonet] QC on stained slides

2010-08-03 Thread louise renton
Thank you for your very helpful suggestionsThe situation here is a
little weird as I am the only one doing the sectioning in this unit
(research unit), and mostly i look at my own slides to do
histomorphometry...so I have to grade myself??!!!

Oh well, we do the best we can

best regards



On Mon, Aug 2, 2010 at 7:05 PM, WILLIAM DESALVO wdesalvo@hotmail.comwrote:

  Attached is a copy of the QA sheet that I provided at one of my NSH
 presentations. Review and use as needed.

 I believe your question of what makes a slide adequate or superior may be
 the wrong question. As long as you have a subjective review with a wide and
 varied specification, it will be extremely difficult to set a scoring
 process that will provide the desired feed back. I suggest you might want to
 approach in a different way and look at the number of defect or unacceptable
 products produced as compared to an agreed upon and high standard.

 use a Six Sigma tool to help you. I suggest you need an opportunities for
 improvement procedure and use the Defects per Million Opportunities
 (DPMO) tool. This will provide a process to evaluate the performance above
 and below standard in a simple and efficient manner. Your goal is never to
 deliver adequate work to your customer, the pathologist, but to always
 deliver the highest quality of work. You cannot improve the quality of work
 produced unless you know what is not meeting standard, not what is adequate
 or superior. Whether it is one person or multiple people working in the lab,
 there will always be variation in the product delivered because it is a
 manual process. You always want to reduce and narrow that variation to
 maintain the highest and consistent quality. But to narrow the variation you
 must have a standard and the standard must be agreed upon by the persons
 producing and the persons reviewing the work.

 I believe using a Six Sigma tool will provide you with the feedback you
 require and help you maintain the highest quality of slides delivered to the
 pathologists. Standardize your procedures and protocols, develop standards
 (highest quality standards) w/ your pathologists and then document, review,
 track and trend defects to improve the process. The data collected will give
 you specific information as to how you have performed to standard combined
 with the specific number of units produced by you (quality and quantity
 combined). This process will also allow you to compare multiple individuals
 working in the department and compare those individuals to each
 other. Everyone will be evaluated according to standards set for the work
 produced, plain, simple and effective.

 *William DeSalvo,* B.*S., HTL(ASCP)*
 *
 *



  Date: Mon, 2 Aug 2010 09:25:07 +0200
  From: louise.ren...@gmail.com

  To: Histonet@lists.utsouthwestern.edu
  CC:
  Subject: [Histonet] QC on stained slides
 
  Hi all
 
  As part of a self assessment programme conducted by my employer, and
 related
  to my performance review and salary adjustment, I need to determine the
  criteria of what makes a stained slide acceptable or unacceptable. I was
  wondering if anyone out there had a checklist that they would be
 willing
  to share, that i could perhaps adapt. I realise that the easiest would be
  to send slides out for external control, but in this case it is not
  feasible.
 
  What I put together is this:
 
  - Quality of decalcification, processing, infiltration
  - Quality of sections (no wrinkles, missing bits, scores etc)
  - Entire representation of tissue area
  - staining pattern as expected according to protocol
  - coverslipped without bubbles or other inclusions
  - labelled neatly and correctly
 
  but, the question inmy mind is what would be the criteria that would make
 a
  slide merely adequate or truely outstanding?
 
  PLease help
 
  thank you
 
  --
  Louise Renton
  Bone Research Unit
  University of the Witwatersrand
  Johannesburg
  South Africa
  +27 11 717 2298 (tel  fax)
  073 5574456 (emergencies only)
  There are nights when the wolves are silent and only the moon howls.
  George Carlin
  No trees were killed in the sending of this message.
  However, many electrons were terribly inconvenienced.
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  Histonet@lists.utsouthwestern.edu
  http://lists.utsouthwestern.edu/mailman/listinfo/histonet




-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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[Histonet] QC on stained slides

2010-08-02 Thread louise renton
Hi all

As part of a self assessment programme conducted by my employer, and related
to my performance review and salary adjustment,  I need to determine the
criteria of what makes a stained slide acceptable or unacceptable. I was
wondering if anyone out there had a checklist that they would be willing
to share,  that i could perhaps adapt. I realise that the easiest would be
to send slides out for external control, but in this case it is not
feasible.

What I put together is  this:

   - Quality of decalcification, processing, infiltration
   - Quality of sections (no wrinkles, missing bits, scores etc)
   - Entire representation of tissue area
   - staining  pattern as expected according to protocol
   - coverslipped without bubbles or other inclusions
   - labelled neatly and correctly

but, the question inmy mind is what would be the criteria that would make a
slide merely adequate or truely outstanding?

PLease help

thank you

-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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Re: [Histonet] aanlktik8dnsqt16rpmss8_x5fgqqe_18-ctuenp71...@mail.gmail.com

2010-05-20 Thread louise renton
My wrongI meant epidermis. Blame old age




On Thu, May 20, 2010 at 12:08 AM, Andrew Burgeson nap...@siscom.net wrote:

 One thing i forgot to mention wasthat when you embed, try
 to orientate the
 tissue so that the long axis (if there is one) lies in the
 same direction as
 the cutting stroke. when embedding, orientate the tissue at
 a slight
 diagonal, so that the knife dous not continously pass
 through the tissue on
 the cutting stroke -

 (this works well for skins also, except make sure the
 dermis is away from the knife)


 I do not agree with the above statement about the dermis
 being embedded so as to be facing away from the blade. The
 last tissue to hit the knife edge should be EPIDERMIS.
 Dermis and SubQ fat should be the first tissues to hit the
 blade. Perhaps this is what you meant by dermis?
 Otherwise, I would agree with that methodology of
 orientation and angle.

 MethylMethacrylate bone embedding works very well from what
 I understand. See link:

 http://www.jhc.org/cgi/content/full/45/2/307



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-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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[Histonet] large fibrous bone tissue part 2

2010-05-19 Thread louise renton
Dear Cornelia  Jack

i disagree about the soaking as this will negate the chilling  effect of the
freezer. The whole idea is to have the block as cold as possible to get
maximum support from the wax*. If the tissue has been processed and
fixed properly, there should not be a necessity for rehydrating on water

One thing i forgot to mention wasthat when you embed, try to orientate the
tissue so that the long axis (if there is one) lies in the same direction as
the cutting stroke. when embedding, orientate the tissue at a slight
diagonal, so that the knife dous not continously pass through the tissue on
the cutting stroke - (this works well for skins also, except make sure the
dermis is away from the knife) If this doesn't make sense, let me know and i
will send a graphic privately


*ease of sectioning relies on the embedding material being as close to the
density/stiffness of the tissue being embedded. Thats why you can section
undecal bone in resin

best regards


On Wed, May 19, 2010 at 7:33 AM, Jack Ratliff ratliffj...@hotmail.comwrote:

 Louise has very good advice here as related to paraffin processing of this
 tissue. I may even add to soak the block a little more before taking the
 final sections. However, have you ever thought of processing into MMA resin?
 If you have these capabilities you may be very pleased with the results and
 find the microtomy less problematic. Let me know if or how I can be of
 assistance!

 Jack


 On May 15, 2010, at 4:30 AM, louise renton louise.ren...@gmail.com
 wrote:

 I have found this helps.
 1. Embed the tissue in  a dep mould, as this provides more stability, then
 2. Face the block
 3.. leave in -20 deg freezer overnight
 4. remove from freezer and cut sections
 5. If you have multiple blocks to work with, leave them in the freezer
 until
 ready to cut

 regards
 On Fri, May 14, 2010 at 7:42 PM, Reuel Cornelia reuel.corne...@tsrh.org
 wrote:

 How do you process a fibrous bone tissue ( 7 mm thick).  We have use
 Paraffin Type 9 from Richard allan Scientific to embed works well with
 our
 bone femur( 7 mm) when cutting but on fibrous bone it does not give us a
 good result in cutting the blocks. It is like cutting a uterus tissue but
 a
 little bit harder. Please give me your opinion on how to remedy this kind
 of
 tissue not mentioning double embedding method or plastic. Thank you.

 Reuel Cornelia



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 --
 Louise Renton
 Bone Research Unit
 University of the Witwatersrand
 Johannesburg
 South Africa
 +27 11 717 2298 (tel  fax)
 073 5574456 (emergencies only)
 There are nights when the wolves are silent and only the moon howls.
 George Carlin
 No trees were killed in the sending of this message.
 However, many electrons were terribly inconvenienced.
 ___
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 http://lists.utsouthwestern.edu/mailman/listinfo/histonet




-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
___
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[Histonet] Fwd: TDE decalcifier, decalcification commentary

2010-05-19 Thread louise renton
 Thanks Gayle for your input.

Trouble is, i like the TDE system, and despite not knowing what's in the
solution the IHC results are great. I wasn't sure if endpoint testing could
be used with other acids besides HCl, but you have answered my doubts on
that score. I suspect that, from the smell, it is HCl, but I will have to
dig out old chemistry books to remember how to determine an unknown acid!

anyway, thanks again for your invaluable advice.

best regards






On Tue, May 18, 2010 at 8:52 PM, gayle callis gayle.cal...@bresnan.netwrote:

  Hi Teri and Louise,



 There is NO way to tell if a decalcifying solution is used up but you can
 be sure it IS used up.  So the best thing to do is endpoint testing to know
 when the bone is free of calcium.  All decalcifiers become exhausted, so one
 has to replenish the solution with fresh throughout the decal procedure,
 faithfully.  This really doesn't take that much time in the long run, and
 guarantees properly decalcified bone that will not be overexposed to acid -
 a huge no no for decent staining.



 The weight loss/weight gain method is great if you don't have an xray
 machine.   If the solution is an acid e.g. nitric, HCl, or formic, then one
 should do the chemical test or you can play with the weight loss/weight gain
 method.



 Attached are both the chemical and weight loss/weight gain methods, the
 latter was developed for testing nitric acid.  However, this is the easiest
 method to test EDTA other than an xray machine, with the latter being the
 most sensitive i.e. accurate.



 *If the company cannot provide the answer for what is in TDE, then I would
 not use it*. MSDS sometimes tell you, but if not, that company would be
 sayonara from my lab.   I have to know WHAT chemical is doing the work, very
 important to do IHC or routine only staining.   I would rather make it up
 decalcifying solutions myself than buy an product that is unknown, and
 stubbornly proprietary!



 If you do a chemical endpoint test, do NOT stir the decal solution during
 decalcification.  Suspend bones, then collect the aliquot from bottom of the
 container where Ca++ resides.  Remove your samples, and rinse with tap water
 while you do the test.  Return samples to FRESH decalcifying solution and
 proceed with decalcification/testing, etc, etc.



 May not be the answers you wanted but certainly how I have always done bone
 decalcification without problems.



 Take care, Ladies



 Gayle Callis









 *From:* Johnson, Teri [mailto:t...@stowers.org]
 *Sent:* Tuesday, May 18, 2010 9:58 AM
 *To:* 'gayle callis'
 *Subject:* Histonet post



 Hey Gayle, thought I'd point this one out to you. Looks like it's right up
 your alley.



 Message: 1

 Date: Mon, 17 May 2010 19:30:30 +0200

 From: louise renton louise.ren...@gmail.com

 Subject: [Histonet] TDE decalcifier

 To: histonet@lists.utsouthwestern.edu

 Message-ID:

 aanlktinrmd_lrg8otwuashunfc-unuv5x8fjviudy...@mail.gmail.com

 Content-Type: text/plain; charset=ISO-8859-1



 hi all,

 although I have been using the TDE decalcification system for awhile, I was

 hoping to get some answers from the community. are there any thoughts as to

 what the solution is?. And how do you tell if  the solution is used up or

 not. I wonder if anybody out there has some idea as to whether the solution

 is saturated with calcium salt or not. as always, I look forward to some

 answers.

 Best regards

 --

 Louise Renton

 Bone Research Unit

 University of the Witwatersrand

 Johannesburg

 South Africa

 +27 11 717 2298 (tel  fax)

 073 5574456 (emergencies only)

 There are nights when the wolves are silent and only the moon howls.

 George Carlin

 No trees were killed in the sending of this message.

 However, many electrons were terribly inconvenienced.





 I hope things are thawing a bit where you are. I wish it would quit raining
 and warm up here. Supposed to be 80 degrees this weekend. I can't wait!



 All the best,

 Teri





 __ Information from ESET Smart Security, version of virus signature
 database 5122 (20100517) __

 The message was checked by ESET Smart Security.

 http://www.eset.com


 __ Information from ESET Smart Security, version of virus signature
 database 5122 (20100517) __

 The message was checked by ESET Smart Security.

 http://www.eset.com




-- 
 Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.



-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending

[Histonet] TDE decalcifier

2010-05-17 Thread louise renton
hi all,
although I have been using the TDE decalcification system for awhile, I was
hoping to get some answers from the community. are there any thoughts as to
what the solution is?. And how do you tell if  the solution is used up or
not. I wonder if anybody out there has some idea as to whether the solution
is saturated with calcium salt or not. as always, I look forward to some
answers.
Best regards
-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
___
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http://lists.utsouthwestern.edu/mailman/listinfo/histonet


Re: [Histonet] large fibrous bone tissue

2010-05-15 Thread louise renton
I have found this helps.
1. Embed the tissue in  a dep mould, as this provides more stability, then
2. Face the block
3.. leave in -20 deg freezer overnight
4. remove from freezer and cut sections
5. If you have multiple blocks to work with, leave them in the freezer until
ready to cut

regards
On Fri, May 14, 2010 at 7:42 PM, Reuel Cornelia reuel.corne...@tsrh.orgwrote:

 How do you process a fibrous bone tissue ( 7 mm thick).  We have use
 Paraffin Type 9 from Richard allan Scientific to embed works well with our
 bone femur( 7 mm) when cutting but on fibrous bone it does not give us a
 good result in cutting the blocks. It is like cutting a uterus tissue but a
 little bit harder. Please give me your opinion on how to remedy this kind of
 tissue not mentioning double embedding method or plastic. Thank you.

 Reuel Cornelia



 ___
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 Histonet@lists.utsouthwestern.edu
 http://lists.utsouthwestern.edu/mailman/listinfo/histonet




-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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[Histonet] Cryostat vs decal sections of bone

2010-05-10 Thread louise renton
Hi all,

last year sometime I was asked to budget for some equipment for our unit.
Not expecting to get anything i aimed high, and requested a cryostat and
cryoJane system.
Lo and behold, the planetary influences were just right, and my request was
approved. Now, I've got cold feet (pardon the pun) and I'm wondering if
there *are*  any distinct advantages of cryosections of bone over
demineralised wax embedded samples in regards to immuno and in-situ ?.

-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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Re: [Histonet] retrieveing DNA from a mounted HE slide

2010-04-20 Thread louise renton
Long, long ago when dinosaurs roamed and PCR was an emerging technique, what
I would do is as follows:

REmove coverslip in appropriate solvent, soaking te get any mounting media
residue off. Rinse slide in abs alc and the 70% alcohol and then scrape off
tissue into an Eppy with a new disposable blade. (Obviously, wearing gloves
and taking care not to cut yourself). Rinse in sterile water, spin down, pur
off supernatant , and contine as for normal extraction with your usual lysis
buffer/extraction system. (back then we were using phenol chloroform!)

The quality of the DNA is dependent on one of several factors, including the
fixation medium, length of fixation, section thickness etc.



On Mon, Apr 19, 2010 at 7:40 PM, Barone, Carol cbar...@nemours.org wrote:

 Hello histonetter's...I come one again to the experts in the field.

 I have been give two HE slides from an autopsy case (have no idea how
 old)...and have been asked to retieve this tissue into an eppy with
 lysis buffer for DNA. Does anyone out there have an existing method for
 doing this? I have a notion what is needed to do this (though I am
 somewhat skeptical on the quality of the DNA retieved from the tissue)
 .but, perfer not to re-invent the wheel...So if someone out there
 has a method for doing this, I would certainly appreciate it, if you
 wouldn't mind sharing it with us. Thanks... to all! CB
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-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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[Histonet] Re:ub subscribe

2010-03-23 Thread louise renton
Nah...I'd miss the myriad spelling variations variations of the word
unsubscribe

On Mon, Mar 22, 2010 at 10:35 PM, Geoff McAuliffe mcaul...@umdnj.eduwrote:

 Peter et al.

 All people have to do is read the instructions. How much simpler can one
 make it? Hit the delete key when you see any sort of unsubscribe message.

 Geoff


 Peter Carroll wrote:

 sometimes, i feel like im stuck in some histonet unsubscribe timewarp. i
 hate it!

 i really wish that the histonet admins would address this 'unsubscribe'
 madness once and for all. the periodic notices on how to unsubscribe arent
 working and sadly, the casual subscriber has proven that they dont know how
 to properly use a listserv...  someone needs to rethink how this list is
 administrated. i mean no offense, just constructive criticism. if theres any
 way any of us can help out, im sure many of us with various expertises would
 gladly volunteer, just say the word!

 i am confident that i speak for all of us when i say that this repetitive,
 mindless unsubscribe business really detracts from the quality of my
 histonet experience, and theres no reason why we cant work together to fix
 it cone and for all :)






 - Original Message -
 From: Ms Janet Tao tao_ja...@yahoo.com
 Date: Monday, March 22, 2010 1:35 pm
 Subject: [Histonet] ub subscribe
 To: Histonet@lists.utsouthwestern.edu



 please unsubscribe me


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 --
 --
 **
 Geoff McAuliffe, Ph.D.
 Neuroscience and Cell Biology
 Robert Wood Johnson Medical School
 675 Hoes Lane, Piscataway, NJ 08854
 voice: (732)-235-4583 mcaul...@umdnj.edu
 **




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-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
___
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Re: Re[2]: [Histonet] help (UNCLASSIFIED)

2010-03-23 Thread louise renton
Yep, I seem to remember reading somewhere that Silver nitrate was used as a
wart remedy to burn skin off...
still I feel for you - did the same thing once, and took a scrubbing brush
to my skin to get it all off!

2010/3/23 Maxim Peshkov maxim...@mail.ru

 Patsy:
 Not, I wrote chemical relations between these reagents.
 Sorry, but I am not recommended it for your skin.
 Really, nothing necessary to do.
 After some days old keratin will fall off and
 you will not see any traces of silver nitrate.
 Sincerely,
 Maxim.

 You wrote at 23 March 2010, 21:33:43:

  Are you trying to kill me?

  Patsy Ruegg, HT(ASCP)QIHC
  IHCtech, LLC
  Fitzsimmons BioScience Park
  12635 Montview Blvd. Suite 215
  Aurora, CO 80010
  P-720-859-4060
  F-720-859-4110
  wk email pru...@ihctech.net
  web site www.ihctech.net
 

  This email is confidential and intended solely for the use of the
 Person(s)
  ('the intended recipient') to whom it was addressed. Any views or
 opinions
  presented are solely those of the author. It may
  contain information that is
  privileged  confidential within the meaning of
  applicable law. Accordingly
  any dissemination, distribution, copying, or other use of this message,
 or
  any of its contents, by any person other than the intended recipient may
  constitute a breach of civil or criminal law and is strictly prohibited.
 If
  you are NOT the intended recipient please contact the sender and dispose
 of
  this e-mail as soon as possible.

  -Original Message-
  From: Maxim Peshkov [mailto:maxim...@mail.ru]
  Sent: Tuesday, March 23, 2010 11:43 AM
  To: pru...@ihctech.net
  Cc: histonet@lists.utsouthwestern.edu
  Subject: RE: [Histonet] help (UNCLASSIFIED)

  Patsy:
  Chemically, silver nitrate deposites can be
  reduced onto the slides by 0.5% potassium ferricyanide.
  I am not sure that it may work onto living skin.
  Sincerely,
  Maxim Peshkov,
  Russia,
  Taganrog.
 mailto:maxim...@mail.ru



  __ Информация NOD32 4768 (20100113) __

  Это сообщение проверено Антивирусной системой NOD32.
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 --
 С уважением,
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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
+27 11 717 2298 (tel  fax)
073 5574456 (emergencies only)
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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Re: [Histonet] Fire in the lab

2010-02-27 Thread louise renton
hey, I once set my hair on fire in the lab...singed off my eyebrows and
burnt my nostril hair. It took several days for the burnt hair smell to get
out of my nose!!.

This too was in a time long long ago in another time dimension

On Sat, Feb 27, 2010 at 12:51 AM, Joe Nocito jnoc...@satx.rr.com wrote:

 Once upon a time in a far away land, we used to boil our embedding molds in
 boiling soapy water, over an open Bunsen burner, followed by an alcohol
 rinse then air dry. One time the fire alarm was activated and we had to
 evacuate the hospital. We were out there quit awhile. When we received the
 all clear to go back into the hospital, I was the first one back in the lab
 and the fire department was there, looking into our pot that had boiled out
 and was smoking up the lab. This wasn't the cause of the first alarm, but it
 did set off the second.

 Joe
 - Original Message - From: CHRISTIE GOWAN christiego...@msn.com


 To: histonet@lists.utsouthwestern.edu
 Sent: Friday, February 26, 2010 8:20 AM

 Subject: [Histonet] Fire in the lab





  Dear Histonet Friends,

 I just wanted to share an incident we recently had with an old paraffin
 pot. One of my techs came in on Sunday to embed some tissues, went into the
 processor room and smelled something burning. He noticed our old paraffin
 pot had charred looking labels on the outside so he went over, opened the
 lid and poof!!! the pot went up in flames. The thermostat had gone haywire
 and heated the paraffin to flash point. Opening the lid gave it the oxygen
 it needed to ignite. He triggered the alarm, made the appropriate call and
 then put it out with an extinguisher. Of course it kept re-igniting because
 he could not get behind it to pull the plug. The fire dept finally was able
 to get it pulled out and unplugged. Needless to say the tech was shaken and
 the room was a mess. I applaud his courage and am not sure I would have done
 the same. There was enough xylene and alcohol on the 4 processors to cause
 quite an explosion but everything else was in a flammable cabinet. I was
 wondering if this type of thing had ever happened to anyone else?? Needless
 to say, we have de-comissioned all old paraffin pots and will order only
 those with over temp safety features. I guess I just wanted to remind
 everyone that fires can happen in the lab and do probably more often than we
 hear about. This was the first time for me and I have been in this business
 for over 20 years. Take care and be safe.

 Christie Gowan HT (ASCP)
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Bone Research Unit
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Johannesburg
South Africa
There are nights when the wolves are silent and only the moon howls.
George Carlin
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However, many electrons were terribly inconvenienced.
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Re: [Histonet] problem with subbed slides

2010-02-10 Thread louise renton
Just for interest's sake could this be some fungal growth? Try staining a
slide with H/E and look under the microscope.

how to fix? perhaps acid digestion and resubbing?



On Wed, Feb 10, 2010 at 8:15 PM, Hisham Mohammed hisham@gmail.comwrote:

 dear histonetters

 following gelatin subbing of big glass slides we observed numerous white
 patches in almost the entire batch of slides subbed.

 what could be the remedy to remove these white patches.

 waiting for a practical solution.

 with regards

 hisham mohammed
 senior research centre
 national brain research centre
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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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Re: [Histonet] Alternatives to BioQuant for Bone Histomorphometry

2010-02-08 Thread louise renton
I use a system called analySIS (for Windows)- marketed here by Olympus. We
use this for percentage bone calculations, linear measurements and touch
counting. The data is immediately put into a spread sheet and you have an
automatic stats facility



On Mon, Feb 8, 2010 at 2:21 PM, Kathleen Jones kjo...@upei.ca wrote:

 Hi Adam

 Have you checked out ImageJ? It's a free downloadable program that I
 have used for alveolar morphometry. Fairly user friendly, more so than
 BioQuant, although not quite as thorough.

 Good Luck
 Kathy


 Kathleen Jones
 Research Technician
 Pathology/Microbiology
 AVC - UPEI
 (902)566-0595


  Adam . anonwu...@gmail.com 2/5/2010 6:38 PM 
 Hi all,

 I am looking for an alternative program to BioQuant for bone
 histomorphometry. We need to quantify the number of osteoblasts /
 osteoclasts per bone surface area as well as the percent surface area
 occupied by those cells. We have a computer with BioQuant on it
 available,
 but we find the software to be incredibly clunky and often nearly
 impossible
 to use. Based on my limited attempts to use it, it very well might rank
 as
 one of the worst user interfaces I've ever seen, and I was trained in
 computer science and have seen my fair share of horrible software (I'm
 looking at you, Lotus Notes).

 Anyhow, any suggestions on a (preferably cheap / free) replacement for
 doing
 simple analysis or how to make BioQuant less painful would be very
 helpful.

 Thanks,
 Adam
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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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[Histonet] paper on osteoclasts

2009-12-07 Thread louise renton
Hi all,

I am going crazy - and its not even friday yet! A little while ago (OK about
3 years) i came across a paper where the researcher had shown the transition
of macrophages to osteoclasts  using immuno staining - i cannot seem to find
it on Pubmed, dont know the author date or journal.

i hope soemone out there can help

best egards

-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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[Histonet] OT - adoptive t cell therapy

2009-12-01 Thread louise renton
Hi all,

this is a very OT subject, but does anyone know about the above therapy in
regards to adenocarcinoma? (i know that trialls are being done on melanomas
presently). i would be grateful for any info

-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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Re: [Histonet] Cutting paraffin sections in a warm room

2009-11-05 Thread louise renton
One of the little things I learned along the way regarding bone sectioning:
if time allows, trim (face) the blocks and leave them in the deep freeze
(-?20) overnight. T
Then when you are ready to section, take ONE block out at a time and place
on ice. this trick is especially useful for us as we cut 50 serial sections
at one go. The block is usually cold enough to get at least 40 sections off
it before recooling.
BTW, we use the deepe embedding moulds, about 1cm deep, so if you are using
the flatter mouds, maybe overnight is not necessary

my 2c worth

have a great weekend!

On Thu, Nov 5, 2009 at 8:10 PM, Adam . anonwu...@gmail.com wrote:

 Hi all,

 I've just recently started cutting paraffin sections (of bones). A few
 weeks
 ago, the facilities people decided that it was fall and now the lab is
 significantly warmer than it used to be, and my paraffin is falling apart
 and sticking to everything. Apparently, we can't control the temperature
 through a thermostat at all, and the microtome is inside the lab. I was
 wondering if anyone had any ideas on how to section in a warm room.

 Thanks,
 Adam
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Bone Research Unit
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Johannesburg
South Africa
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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Re: [Histonet] Sakura TDE 30

2009-10-02 Thread louise renton
OK,


Firstly, what you do depends on what samples you are dealing with. We
decalcify smallish samples of bone about 1x1cm - this can either compact or
trabecular bone.
Here are some of the things I learned..
1. Do not overload the chamber.place samples between the electrodes, and
rather do fewer samples - decal can be very quick if used right.
2. Do not use metal lids on casettes if using them (or any metal clips,
parts etc)
3. If the samples aer heavily mineralised, ie huge pieces of compact bone,
change the fluid when you see that the fizzing around the electrodes has
slowed
4. Rather swich off the unit overnight (with the samples still in) if you
are doing a long decal - then swich on in the day, so that you can monitor
progress.
5. Not all sam[les will decalcify at the same rate - check them all
individually at 4 - 5hr, or in the morning of the next day
5. When decal is finished - rinse samples thoroughly in running tap water
for at LEAST and hour before processing
6. I have decalcified a slice of pig femur about 0.5 cm thick in about 5hrs

hope this helps


On Thu, Oct 1, 2009 at 7:48 PM, Isabel Cristina Soares Brandao 
isabel.bran...@sarah.br wrote:

 The time expended in the process was too long and the tissues had artifacts
 when examined on the microscope. We did exactly the same procedure described
 in the Sakura brochure.
 Do you do something different? How do you verify the process? How long does
 it take to get the samples decalcified?

 Thanks for your help!

  --
  De:   histonet-boun...@lists.utsouthwestern.edu[
 SMTP:histonet-boun...@lists.utsouthwestern.edusmtp%3ahistonet-boun...@lists.utsouthwestern.edu]
 em nome de louise 
 renton[SMTP:louise.ren...@gmail.comsmtp%3alouise.ren...@gmail.com
 ]
  Enviada:  quinta-feira, 1 de outubro de 2009 14:35
  Para: Histonet@lists.utsouthwestern.edu
  Assunto:  Re: [Histonet] Sakura TDE 30
  
  Could you please explain what the problems are. I have had excellent
 results
  with this system
 
  On 10/1/09, Isabel Cristina Soares Brandao isabel.bran...@sarah.br
 wrote:
 
   Hi,
   Does anyone out there have experience with the decalcifier System from
   Sakura? We have just recived the equipment but we could'nt get the
 results
   that they describe in the brochure.
   Isabel C.S. Brandão
   Associação das Pioneiras Sociais
   Patologia Cirúrgica - Brasília - Brasil
  
  
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  --
  Louise Renton
  Bone Research Unit
  University of the Witwatersrand
  Johannesburg
  South Africa
  There are nights when the wolves are silent and only the moon howls.
  George Carlin
  No trees were killed in the sending of this message.
  However, many electrons were terribly inconvenienced.
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-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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Re: [Histonet] Sakura TDE 30

2009-10-01 Thread louise renton
Could you please explain what the problems are. I have had excellent results
with this system

On 10/1/09, Isabel Cristina Soares Brandao isabel.bran...@sarah.br wrote:

 Hi,
 Does anyone out there have experience with the decalcifier System from
 Sakura? We have just recived the equipment but we could'nt get the results
 that they describe in the brochure.
 Isabel C.S. Brandão
 Associação das Pioneiras Sociais
 Patologia Cirúrgica - Brasília - Brasil


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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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[Histonet] BLTS - OT

2009-09-30 Thread louise renton
Hey, I thought you meant that famous sandwich ...Bacon Lettuce and Tomato -
guess it must be lunchtime



On Tue, Sep 29, 2009 at 3:20 PM, Kathleen Jones kjo...@upei.ca wrote:

 Hello Histonet

 I am wondering if anyone out there is familiar with the Barbeito-Lopez
 Trichrome stain. I am using it to identify early myocardial infarction.
 My damaged tissue is showing up, but it is very subtle. The papers I've
 read show the necrotic myofibers 'popping' out as yellow, whereas mine
 are more pale, almost pink. I'm not sure if I am under decolorizing or
 if I should leave it in the molybdic acid aniline blue methyl orange
 longer.

 Any suggestions would be greatly appreciated!

 Kathy Jones
 Research Technician
 AVC-UPEI

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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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Re: [Histonet] mice legs

2009-09-16 Thread louise renton
No, I tend to use my own for work!sorry couldn'r resist midweek
madness...;-)

On Tue, Sep 15, 2009 at 3:42 PM, Shaw, Sharon shs...@wpi.edu wrote:

 Good Morning Histo World,

 I would like to know if anyone is working with mice legs, I have a PI that
 I work with that wants to process the whole leg, the problem is I need to
 decal it first and is wondering if the decal will break down the tissue, I
 think it would he doesn't think so. And if anyone has do this would it be
 possible to share your protocol with me from decal to processing.

 Thanks,
 Sharon- WPI
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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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Re: [Histonet] Help With Hemo Fading

2009-07-03 Thread louise renton
Even long term exposure to indoor lighting (fluorescent type) will fade
sectiions. We work in a building where ther lights are permanently on. If we
want to keep our sections fresh and helathy, they get covered up as soon as
.

best regards

On Fri, Jul 3, 2009 at 9:09 AM, Kemlo Rogerson 
kemlo.roger...@waht.swest.nhs.uk wrote:

 I agree.. Also you're not storing them in sunlight are you? Silly
 question I know.



 Kemlo Rogerson
 e-mail kemloroger...@nhs.net if not at work.
 DD   01934 647057 or extension 3311 Mob 07749 754194;
 Embrace uncertainty. Hard problems rarely have easy solutions. --Jonah
 Lehrer
 This e-mail is confidential and privileged. If you are not the intended
 recipient please accept my apologies; please do not disclose, copy or
 distribute information in this e-mail or take any action in reliance on its
 contents: to do so is strictly prohibited and may be unlawful. Please inform
 me that this message has gone astray before deleting it. Thank you for your
 co-operation



 -Original Message-
 From: histonet-boun...@lists.utsouthwestern.edu [mailto:
 histonet-boun...@lists.utsouthwestern.edu] On Behalf Of Rene J Buesa
 Sent: 02 July 2009 20:28
 To: histonet@lists.utsouthwestern.edu; sr...@aol.com
 Subject: Re: [Histonet] Help With Hemo Fading

 The fading most probably is caused by acid in the permanent slide, probably
 because the sections were passed through the alcohols very quickly after the
 acid differentiation, or they stayed little time in tap water after
 differentiation or no bluing agent was used.
 It is unlikely that the mounting medium is acidic, although that could also
 be the cause also. An acid environment over the cover slipped section is the
 most probable culprit for the henatoxylin fading.
 Check the staining protocol.
 René J.

 --- On Thu, 7/2/09, sr...@aol.com sr...@aol.com wrote:


 From: sr...@aol.com sr...@aol.com
 Subject: [Histonet] Help With Hemo Fading
 To: histonet@lists.utsouthwestern.edu
 Date: Thursday, July 2, 2009, 2:42 PM



 Hello everyone,

 ?

 We are having problems with short-term hematoxylin fading and loss of
 detail. The pathologist is freaking out! I've seen hemo fade over a long
 period of time but not in a matter of a few months. Slides from one year ago
 are really bad.

 ?

 I've been out of the business for a number of years and in the interim much
 has changed including reagents. These are GI tract biopsies processed by
 microwave.

 ?

 Any thoughts at all?

 ?

 Thanks! Marg
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-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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Re: [Histonet] Floor materials

2009-04-29 Thread louise renton
Vinyl floors can be almost lethally slippery if wax gets on them its ok
if staff wear flat shoes but woe betide someone coming in with heels!

On 4/28/09, Feher, Stephen sfe...@cmc-nh.org wrote:

 We're building a pathology lab and we're at project phase where flooring
 materials is being discussed.  The initial choice of the architect is to
 use sheet vinyl flooring in the working areas of the lab (with the
 exception of the morgue).  I'm not particularly impressed with the way
 vinyl flooring stands up to stains, solvents and wax.  Do any of you
 have suggestions or experience in a type of flooring for the path lab
 that is superior to commercial vinyl?

 Thanks,

 Steve


 Stephen A. Feher, MS, SCT (ASCP)

 Pathology Supervisor

 Catholic Medical Center

 100 McGregor Street

 Manchester, NH 03102

 603-663-6707

 sfe...@cmc-nh.org mailto:sfe...@cmc-nh.org


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Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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Re: [Histonet] processing v-e-r-y tiny samples

2009-03-20 Thread louise renton
Shandon - or whatever they're called this week- sell nylon mesh biopsy bags.
These are flat bags, sealed on 3 sides. I have found that if you cut one
corner off (ie, a oblong  piece with 2 sides still  sealed) just a tiny bit
bigger than the cassette, you can open the bag, like a book, insert the
sample and flatten the bag over the specimen and place it snug and flat in
the bottom of the casette. It sems to stay like that through processing (esp
if kept the cassette is kept flat in the basket), and is easy to locate
against the mesh for embedding.

On 3/19/09, Andrea Grantham algra...@u.arizona.edu wrote:

 Good Morning!
 In keeping with the weirdness of the projects I get in this lab today my
 question is about processing mosquito GI tracts.
 I have a processing schedule - that is not the problem. I'm wondering if
 anybody out in histoland has a suggestion for what kind of cassette to use.
 I was thinking of the histoscreen cassette because these GI tracts are so
 thin (I think thinner than a hair)and I don't want to wrap them or use
 sponges because I'm afraid that I'll loose them or crush them.
 Any ideas?

 Andi
 .
 : Andrea Grantham, HT(ASCP) Dept. of Cell Biology  Anatomy :
 : Sr. Research Specialist   University of Arizona   :
 : (office:  AHSC 4212)  P.O. Box 245044 :
 : (voice:  520-626-4415)Tucson, AZ  85724-5044USA   :
 : (FAX:  520-626-2097)  (email:  algra...@u.arizona.edu)   :
 :...:
  http://www.cba.arizona.edu/histology-lab.html


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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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Re: [Histonet] 20 micron resin sections

2009-03-14 Thread louise renton
Thanks all,

This is more or less what i thought, that 20mu sections  would prove to be
difficult and not all that feasible. So, I wait with bated breath for the
protocol from the researcher


On 3/13/09, Peggy Bisher mbis...@princeton.edu wrote:

 One of the labs here use JB4 to section Zebrafish. I sent your question to
 them to see if they could help you out. Here is their response:

 The consensus in the lab (Kari and I) is that no, probably not.  The size
 would probably shred the section and chip it to where they would be uneven,
 etc.  Probably cryo or vibratome would be best.

 They routinely cut their sections between 2-5 microns.

 Good luck to you!

 Cheers,

 Margaret E. Bisher
 Electron Microscopy  Histology Core Facility Manager
 Department of Molecular Biology
 Princeton University
 Moffett Laboratory, Room 113
 Princeton, New Jersey
 Office: (609) 258-7026
 Fax: (609) 258-8468
 mbis...@princeton.edu





 On 3/13/09 3:53 AM, louise renton louise.ren...@gmail.com wrote:

  Hi all,
 
  I have a query from a colleague doing research on neuroanatomy as to
 whether
  it is possible ( with relative ease)  to cut 20mu sections from JB4 resin
  embedded tissue? Apparently these sections ae to be stained and then used
  for stereomicroscopy. My experience is not that extensive to be able to
  answer her, so I would appreciate some advice here
  best regards--
  Louise Renton
  Bone Research Unit
  University of the Witwatersrand
  Johannesburg
  South Africa
  There are nights when the wolves are silent and only the moon howls.
  George Carlin
  No trees were killed in the sending of this message.
  However, many electrons were terribly inconvenienced.
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-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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[Histonet] 20 micron resin sections

2009-03-13 Thread louise renton
Hi all,

I have a query from a colleague doing research on neuroanatomy as to whether
it is possible ( with relative ease)  to cut 20mu sections from JB4 resin
embedded tissue? Apparently these sections ae to be stained and then used
for stereomicroscopy. My experience is not that extensive to be able to
answer her, so I would appreciate some advice here
best regards--
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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[Histonet] thanks

2009-02-27 Thread louise renton
thanks to all who replied to my query regarding slide filing pages  - I have
lots of browsing to do today - yay!!!


have a great weekend!

-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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[Histonet] slidex filing pages

2009-02-25 Thread louise renton
Hi all,

Anyone familiar with Slidex pages - rigid pastic pages in which one can
store slides (20/page)? These pages are pre-punched so they can go into ring
binder but there is also a filing box that one can use.

We have been using these for years, but the agency that dealt with the
parent company has pulled out and we are getting no joy from Slidex Japan.
Seems they don't answer English correspondence.

Any thoughts?--
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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Re: [Histonet] lids for stainer containers

2008-12-03 Thread louise renton
These sound like the kind of thing that goes on a foil take away  or
freezer container. Try a home suply depot? We have specialist stores here
that supply serious home bakers and chocolatiers and  I know that they carry
what you describe - bit far for you to come though...




On 12/3/08, Perry, Margaret [EMAIL PROTECTED] wrote:

 We are looking for a source that sells a lid that looks like wax covered
 cardboard.  We use them on top of the Shandon slide containers holding
 xylene or formula 83 while waiting to coverslip.  They are about 5x7 and
 very thin.  They have been here for years so I have no idea where they came
 from.  Any help in finding them or a substitute will be greatly
 appreciated.  Thanks.

 Margaret Perry HT (ASCP)
 IHC Lab Manager Veterinary Science
 Animal Disease Research and Diagnostic Lab
 South Dakota State University
 Box 2175 North Campus Drive
 Brookings SD 57007

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-- 
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Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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[Histonet] osteoid

2008-11-25 Thread louise renton
Thnaks for all the replies I got on this subject - they have clarified my
thoughts somewhat

-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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[Histonet] Osteoid identifiction

2008-11-20 Thread louise renton
Hi al, I have received a sample of ?bone where the clinician wants to
identfy osteoid. According to my knowledge (now perhaps a little daed) the
traditional processing method is plastic embedding of some sort. Is this
still the case or are there methods to use standars paraffin processing?

Best regards--

Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
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Re: [Histonet] Tunnel vs TUNEL

2008-10-16 Thread louise renton
Thanks to those who answered, those who were serious and those who weren't
:-) Now i can sleep easier,  nights. Anyway its all the fault of
spellcheckers (which is satining got in..to those who picked it up!)


love u all

On 10/15/08, Jacqui Detmar [EMAIL PROTECTED] wrote:

  Hey there.  I'm in the cell death field and do *plenty* of TUNELs.  The
 short form you are using is correct.  I have also seen it as terminal
 deoxynucleotidyl transferase-mediated dUTP nick-end labeling.  Anyway,
 Tunnel is dead wrongsomeone just made a mistake.  I am shocked to learn
 that even reputable journals are prone to these grin, wink.

 Jacqui



  Jacqui Detmar, Post-doctoral Fellow
 Samuel Lunenfeld Research Institute,
 Mount Sinai Hospital,
 25 Orde Street, room 6-1001 AJ
 Toronto, ON, Canada
 M5T 3H7

 Tel:   416-586-4800 x5607
 Fax:  416-586-8588
 email:   [EMAIL PROTECTED]


 --
 *From:* [EMAIL PROTECTED] on behalf of louise
 renton
 *Sent:* Wed 10/15/2008 4:03 AM
 *To:* Histonet@lists.utsouthwestern.edu
 *Subject:* [Histonet] Tunnel vs TUNEL



 hey guys,

 what is the correct way of writing this? I always thought it was TUNEL
 (Terminal deoxynucleotidyl transferase dUTP nick end labeling ), but I
 recently saw an article in a reputable journal refer to tunnel satining -
 is ths something differnt or just sloppiness?



 --
 Louise Renton
 Bone Research Unit
 University of the Witwatersrand
 Johannesburg
 South Africa
 There are nights when the wolves are silent and only the moon howls.
 George Carlin
 No trees were killed in the sending of this message.
 However, many electrons were terribly inconvenienced.
 ___
 Histonet mailing list
 Histonet@lists.utsouthwestern.edu
 http://lists.utsouthwestern.edu/mailman/listinfo/histonet




-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
___
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[Histonet] Tunnel vs TUNEL

2008-10-15 Thread louise renton
hey guys,

what is the correct way of writing this? I always thought it was TUNEL
(Terminal deoxynucleotidyl transferase dUTP nick end labeling ), but I
recently saw an article in a reputable journal refer to tunnel satining -
is ths something differnt or just sloppiness?



-- 
Louise Renton
Bone Research Unit
University of the Witwatersrand
Johannesburg
South Africa
There are nights when the wolves are silent and only the moon howls.
George Carlin
No trees were killed in the sending of this message.
However, many electrons were terribly inconvenienced.
___
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