Re: [Matplotlib-users] error AttributeError: 'module' object has no attribute 'use'

2010-07-27 Thread Jae-Joon Lee
On Sun, Jul 25, 2010 at 3:55 PM, Satish Raghunath wrote: >  " AttributeError: 'module' object has no attribute 'use' " It means that the "module" object (matplotlib) has no attribute named "use". This kind of error is often encountered when wrong module is imported as matplotlib. Try import ma

Re: [Matplotlib-users] matplotlib subplot2grid and projection

2010-07-27 Thread Jae-Joon Lee
Thanks for reporting. This is now fixed in r8581(maint branch) and r8582(trunk). Meanwhile, you may define your own subplot2grid function and use it instead. from matplotlib.gridspec import GridSpec from matplotlib.pyplot import gcf, draw_if_interactive, delaxes def mysubplot2grid(shape, loc, row

Re: [Matplotlib-users] Saving as eps file shifts image?

2010-07-28 Thread Jae-Joon Lee
On Thu, Jul 29, 2010 at 1:17 AM, Jenna L. wrote: > That looks fine to me too, but if you plot that as one subplot in a 5x5 array > of subplots or more, then you can see the shift I am talking about in the > eps file.  Example: I still don't see it (a capture of my eps output is attached). Can you

Re: [Matplotlib-users] Twin Axes

2010-08-03 Thread Jae-Joon Lee
On Wed, Aug 4, 2010 at 2:21 AM, R. Padraic Springuel wrote: > Things I've tried: > Adding a size keyword argument to the set_xlabel and set_ylabel commands > (both numerical and keywords).  No errors are raised, but nothing is > changed on the plot. > > Adding host.axis["left"].set_size(24) and >

Re: [Matplotlib-users] 3d plotting without ticklabels

2010-08-03 Thread Jae-Joon Lee
On Wed, Aug 4, 2010 at 12:11 AM, Benjamin Root wrote: > I have done some further research on this, and it appears to be a bug of > some sort.  Possibly the Locators are already made by the time the > ax.set_xticks([]) is called and that function falls on deaf ears because the > real xaxis is actua

Re: [Matplotlib-users] Scatter legend with colored marker

2010-08-05 Thread Jae-Joon Lee
On Thu, Aug 5, 2010 at 4:48 PM, Jorge Scandaliaris wrote: > BTW, I think I've found another thing > related to legend() and scatter plots: the 'numpoints' keyword argument to > legend is not respected, as showed in the example pasted below, > > Jorge In recent versions, there is a separate parame

Re: [Matplotlib-users] hbars with different labels left and right

2010-08-08 Thread Jae-Joon Lee
On Sun, Aug 8, 2010 at 10:38 PM, Simon Friedberger wrote: > a) I tried using the twinx() command like in that example but the axes > seem to be scaled differently i.e. the ticks on the right don't have the > same spacing as on the left. > twinx() creates an axes whose y-axis is independent from t

Re: [Matplotlib-users] How to improve colorbar scaling?

2010-08-15 Thread Jae-Joon Lee
On Fri, Aug 13, 2010 at 3:34 AM, Jeremy Conlin wrote: > I have a problem with the scaling of the numbers on a colorbar.  The > problem occurs when the numbers used as colorbar labels need to be > scaled (i.e. by 1E3).  The colorbar correctly puts the scaling value > on the top of the colorbar, but

Re: [Matplotlib-users] Hints on sizing plot elements?

2010-08-15 Thread Jae-Joon Lee
On Thu, Aug 12, 2010 at 2:08 PM, Russell E. Owen wrote: > So...can I convince the automatic sizer to always show the full X (time) > axis annotations and put all the variable sizing into the data area? Or > do I have to manually set them somehow? > Another option you may try is to use axes_grid1

Re: [Matplotlib-users] Why can't I change my artist's alpha?

2010-08-16 Thread Jae-Joon Lee
Those artist in offsetbox module (e.g., TextArea, VPacker, AnchoredOffsetbox) are mostly a container object, i.e., actual drawing is done by other artists. And changing the artist attributes of the container object often does not work. In your case (I guess you want to make the frame translucent?),

Re: [Matplotlib-users] How to improve colorbar scaling?

2010-08-16 Thread Jae-Joon Lee
Let me know if it does not work or you have any other problem. Regards, -JJ On Tue, Aug 17, 2010 at 3:17 AM, Jeremy Conlin wrote: > On Sun, Aug 15, 2010 at 10:49 PM, Jae-Joon Lee wrote: >> On Fri, Aug 13, 2010 at 3:34 AM, Jeremy Conlin wrote: >>> I have a problem with the sc

Re: [Matplotlib-users] polar plot

2010-08-18 Thread Jae-Joon Lee
On Wed, Aug 18, 2010 at 10:03 PM, Nils Wagner wrote: > I would like to plot an annulus. > With mpl_toolkits.axisartist, it is possible to make an axes of annulus. But, the resulting axes is not fully compatible with the original matplotlib axes. Most of the tick-related commands won't work and yo

Re: [Matplotlib-users] How to improve colorbar scaling?

2010-08-18 Thread Jae-Joon Lee
On Tue, Aug 17, 2010 at 11:06 PM, Jeremy Conlin wrote: > On Mon, Aug 16, 2010 at 6:13 PM, Jae-Joon Lee wrote: >> Using the set_powerlimits method didn't help? > > I couldn't get set_powerlimits or set_scientific to change anything in > my colorbar scaling.  If I used

Re: [Matplotlib-users] CMYK images

2010-08-26 Thread Jae-Joon Lee
While not a full solution, I have been playing with a ps backend that saves images (and only images) in CMYK color. lcms is required for color transform. http://github.com/leejjoon/mpl_ps_cmyk For example, import mpl_toolkits.ps_cmyk plt.savefig("test_cmyk.eps", format="eps_cmyk") Regards, -JJ

Re: [Matplotlib-users] plotting an arrow outside of the plot does not work any more

2010-08-28 Thread Jae-Joon Lee
I think this change has been there for a while. For recent versions of matplotlib, the default behavior of annotate is that, when xycoords=="data", the arrow is drawn only when the annotated point is inside the axes. To override this behavior, use annotation_clip keyword parameter. pylab.annotate

Re: [Matplotlib-users] subplot2grid weird for non-square shapes

2010-08-28 Thread Jae-Joon Lee
Thanks for reporting. It turns out a (major) bug in gridspec, which should be fixed in r8667 & r8668. You code should work (except the rowspan and colspan needs to be exchanged for ax3 and ax4). Regards, -JJ On Sat, Aug 28, 2010 at 2:17 PM, Erik Tollerud wrote: > If been playing around with t

Re: [Matplotlib-users] plotting an arrow outside of the plot does not work any more

2010-08-28 Thread Jae-Joon Lee
JJ, > > Thanks for the advice. However, the annotation_clip=False addition does not > make a difference to me. I am using Matplotlib from within Sage, though; not > sure if this makes it behave differently. > > Cheers > Stan > > On 8/28/10 5:09 PM, Jae-Joon Lee wrote: >

Re: [Matplotlib-users] legend: changing the text colour

2010-09-03 Thread Jae-Joon Lee
On Fri, Sep 3, 2010 at 11:04 PM, karianne wrote: > Hi, > > I am plotting several different symbols using 3 different colours. The > colours indicate different data sets, whereas the symbols need not be > explained. I would therefore like each label to have a different colour, > i.e. each line in m

Re: [Matplotlib-users] aligning multiple legends

2010-09-06 Thread Jae-Joon Lee
On Tue, Sep 7, 2010 at 11:04 AM, Paul Ivanov wrote: > Is this a reasonable way of achieving the desired result? > Yes. You may take a look at the legend guide. http://matplotlib.sourceforge.net/users/legend_guide.html For your original question, it is not possible to do that with the current le

Re: [Matplotlib-users] Images as markers in matplotlib?

2010-09-08 Thread Jae-Joon Lee
Images can placed at arbitrary position (using the extent keyword). I think this is enough as far as you're careful with the aspect. Looking at the wikipedia example, I don't see any reason that this cannot be done with matplotlib. Regards, -JJ On Wed, Sep 8, 2010 at 6:34 AM, Joshua Holbrook wr

Re: [Matplotlib-users] contour plot in semi-circle domain

2010-09-13 Thread Jae-Joon Lee
On Tue, Sep 14, 2010 at 12:09 AM, Kenshi hibino wrote: > I thought that "axis([0,pi,0,1])" make the writing domain semi-circle, > but complete circle was written as domain. > > Does anyone know how I should write? > With "polar" projection, it is not possible to make semi-circle domain. You need

[Matplotlib-users] Fwd: Plotting Arrows

2010-09-26 Thread Jae-Joon Lee
-- Forwarded message -- From: Jae-Joon Lee Date: Mon, Sep 27, 2010 at 11:41 AM Subject: Re: [Matplotlib-users] Plotting Arrows To: Gus Ishere This turns out to be a bug. And I think fixed it with r8720 and r8721. Meanwhile, try to use other arrowstyles (e.g., "->&qu

Re: [Matplotlib-users] Bring the legend to the front of a plot

2010-09-26 Thread Jae-Joon Lee
Please post a sample script (short but complete) that demonstrates your problem. Regards, -JJ On Sat, Sep 25, 2010 at 12:41 AM, Aman Thakral wrote: > Hi all, > I'm using a draggable legend (class, not function) with axes splines. > Whenever I plot the legend using the host axes, the legend app

Re: [Matplotlib-users] legend and twiny

2010-09-26 Thread Jae-Joon Lee
Try something like handles1, labels1 = ax1.get_legend_handles_labels() handles2, labels2 = ax2.get_legend_handles_labels() ax2.legend(handles1+handles2, labels1+labels2) Also, see http://matplotlib.sourceforge.net/users/legend_guide.html Regards, -JJ On Sat, Sep 25, 2010 at 6:08 AM, Raju Sub

Re: [Matplotlib-users] autoscale when adding data to a Line2D?

2010-09-26 Thread Jae-Joon Lee
On Sat, Sep 25, 2010 at 8:15 AM, Russell E. Owen wrote: > Perhaps I should keep track of the y limits myself. That saves time when > adding a new data point because I can compare it to cached limits > (instead of scanning the whole data set). But it quickly gets messy if > one handles nan correctl

Re: [Matplotlib-users] How to colorize the ticklabels using host.parasite

2010-09-27 Thread Jae-Joon Lee
For your original script that uses axes_grid1 toolkit, you can do something like host.axis["left"].major_ticklabels.set_color(p1.get_color()) par1.axis["right"].major_ticklabels.set_color(p2.get_color()) par2.axis["right"].major_ticklabels.set_color(p3.get_color()) Note that these are

Re: [Matplotlib-users] legend and bbox_to_anchor, and draggable()

2010-09-27 Thread Jae-Joon Lee
On Sun, Sep 26, 2010 at 4:11 AM, Jouni K. Seppänen wrote: > I'm not sure either. It seems that the two-number form of the bounding > box is meant to create a degenerate bounding box so that any kind of > location specifier ("upper right", "lower center", etc) will always hit > that exact place, bu

Re: [Matplotlib-users] Changing behavior of a Pick Event

2010-09-27 Thread Jae-Joon Lee
On Tue, Sep 28, 2010 at 1:36 AM, Aman Thakral wrote: > Hi, > > Is there a way to change the way a Pick event occurs?  Instead of a mouse > click, is it possible to use a mouse hover? I'm just curious because I'm > developing a wx application and would like to have a Tooltip over various > artists.

Re: [Matplotlib-users] How to find out the extend of the actual image in pixels

2010-09-29 Thread Jae-Joon Lee
On Wed, Sep 29, 2010 at 11:12 PM, Jonathan Slavin wrote: > This is interesting.  It seems that the event.x, event.y values are for > the entire figure area rather than limited to the image.  Anyone know > how to get the image values instead? Typically, images in matplotlib are associated with "da

Re: [Matplotlib-users] another incorrectly clipped PNG in the gallery

2010-09-30 Thread Jae-Joon Lee
On Thu, Sep 23, 2010 at 10:31 AM, C M wrote: > Until a more permanent solution is figured out, can anyone recommend > any workarounds, even if they are a little clunky?  I'm embedding mpl > plots in wxPython and am also finding this issue suboptimal. > > Che > A (partial) workaround is possible u

Re: [Matplotlib-users] Issue with Redrawing a Line (numpy.ndarray, set_ydata, and draw)

2010-10-06 Thread Jae-Joon Lee
I believe that you're using older version of mpl (<1.0) and this is a known issues, which has been fixed. http://sourceforge.net/tracker/?func=detail&aid=2917758&group_id=80706&atid=560720 Try to add L1.recache() after set_ydata. Regards, -JJ On Thu, Oct 7, 2010 at 3:06 AM, Michael Cracraf

Re: [Matplotlib-users] matplotlib server side with pdf backend

2010-10-06 Thread Jae-Joon Lee
The pdf backend rely on the "tell" method of a given file object, which (I think) is not supported by stdout. As a workaround, you may use StringIO. from cStringIO import StringIO outs = StringIO() plt.savefig(outs, format='pdf') print os.getvalue() Regards, -JJ On Fri, Oct 1, 2010 at 8:59 PM,

Re: [Matplotlib-users] Scatter Plot with different colors

2010-10-06 Thread Jae-Joon Lee
On Tue, Oct 5, 2010 at 11:07 PM, Alessio Civ wrote: > > Hi, > > I'm trying to make a scatter plot of 2 variables using a thirds as filter to > have different colors. > > Let's say I have those data: > > x=1,2,3,4 > y=2,3,4,5 > z=0,1,0,1 > > Then I want the values of x and y corresponding to those

Re: [Matplotlib-users] Problem with set_yticklabels

2010-10-06 Thread Jae-Joon Lee
With the current svn, the code works as expected. So, I guess this is an issue that has been fixed. Can you try something like below and see if this works? for tck in ax2.get_yticklabels(): tck.set_fontsize(34) Regards, -JJ On Wed, Oct 6, 2010 at 9:50 AM, Michael Lenander wrote: >

Re: [Matplotlib-users] Xtick label size in ImageGrid

2010-10-08 Thread Jae-Joon Lee
The label_mode need to be capital "L", instead of "l". I guess this will fix your first problem. While we make "l" same as "L", but I think it actually degrade the readability of the code, and I;m inclined to leave it as is. Let me know if you have any suggestions though. On Sat, Oct 9, 2010 at 5:

Re: [Matplotlib-users] Xtick label size in ImageGrid

2010-10-08 Thread Jae-Joon Lee
label2.set(**label_kw) -for k, v in label_kw.items(): +for k, v in label_list: setattr(self, '_'+k, v) On Sat, Oct 9, 2010 at 12:10 PM, Jae-Joon Lee wrote: > The label_mode need to be capital "L", instead of "l". I guess

Re: [Matplotlib-users] Adding Arrows to Polar Plot

2010-10-15 Thread Jae-Joon Lee
On Fri, Oct 15, 2010 at 9:33 PM, Lorenzo Isella wrote: > arr = Arrow(0, 0, .3, .3, edgecolor='white') > > # Get the subplot that we are currently working on > ax = gca() > > # Now add the arrow > ax.add_patch(arr) > > I recommend you to use the annotate command. annotate("", xy=(0, 0), xytext=(

Re: [Matplotlib-users] AxesGrid and add_axes

2010-10-18 Thread Jae-Joon Lee
A figure is a figure and an axes is an axes. They are NOT interchangeable. The AxesGrid essentially creates a list of axes. As you may already know, only figure class has an add_axes method. And axes can only be added to a figure. You cannot add an axes to another axes. Since I have no idea what

Re: [Matplotlib-users] AxesGrid and add_axes

2010-10-18 Thread Jae-Joon Lee
While you cannot add an axes to another axes, you can set position of an axes "relative to" another axes. The threads below show simple approaches. http://thread.gmane.org/gmane.comp.python.matplotlib.general/16373 http://old.nabble.com/embedding-figures-inside-another-%28coordinates%29-td2282612

Re: [Matplotlib-users] Question about legend on histogram plot

2010-10-22 Thread Jae-Joon Lee
On Thu, Oct 21, 2010 at 4:31 AM, Gökhan Sever wrote: > How could I change the appearance of the legend symbol in this case? > It auto-uses a patch object (rectangle in this case). > I would like to get a straight line instead. You may use proxy artists. http://matplotlib.sourceforge.net/users/le

Re: [Matplotlib-users] contour plot in semi-circle domain

2010-10-22 Thread Jae-Joon Lee
On Fri, Sep 17, 2010 at 7:34 PM, Kenshi hibino wrote: > > > Jae-Joon Lee wrote: >> >> >> Another option is to use mpl_toolkits.axisartist (distributed with mpl >> 1.0). However, learning curve of the axisartist is also steep. You may >> play around wit

Re: [Matplotlib-users] Question about legend on histogram plot

2010-10-24 Thread Jae-Joon Lee
On Sat, Oct 23, 2010 at 1:30 AM, Gökhan Sever wrote: > By the way, from the linked construct, changing width and height of > the rectangle doesn't have any affect. > This is an expected behavior. Legend handles only respect a subset of parent's properties. For example, for lines, the lengths of t

Re: [Matplotlib-users] getting minor ticks by default

2010-10-24 Thread Jae-Joon Lee
On Sat, Oct 23, 2010 at 5:25 AM, Jonathan Slavin wrote: > Is there some way to get minor tick marks on plots by default?  I can > do: > plt.minorticks_on() > easily enough, but it seems that there is no setting I can put in my > matplotlibrc file that will give me them by default.  Is that right?

Re: [Matplotlib-users] GridSpec for Figure objects?

2010-10-24 Thread Jae-Joon Lee
On Mon, Oct 25, 2010 at 3:14 AM, Nikolaus Rath wrote: > I would like to create subplots with different sizes using the object > oriented API. However, it seems that the subplot2grid() method exists > only in pyplot, but not as a Figure instance method. Am I looking in the > wrong place? How do I u

Re: [Matplotlib-users] Inserting an Image into a Subplot

2010-10-24 Thread Jae-Joon Lee
There are a few ways to show images, where using imshow is one of them. http://matplotlib.sourceforge.net/api/pyplot_api.html?highlight=imshow#matplotlib.pyplot.imshow Take a look at the documentation. http://matplotlib.sourceforge.net/contents.html http://matplotlib.sourceforge.net/gallery.htm

Re: [Matplotlib-users] GridSpec Index Order

2010-10-25 Thread Jae-Joon Lee
On Mon, Oct 25, 2010 at 10:45 PM, Nikolaus Rath wrote: > So I have to instantiate GridSpec with a (rows, column), but when I > index the grid I have to use (column, row). > > Is there any reason for this counterintuitive behaviour? > This is not an intended behavior but a bug which affects a grid

Re: [Matplotlib-users] mpl_toolkits.axes_grid.Grid: How to draw an " axis grid" inside each plot?

2010-10-25 Thread Jae-Joon Lee
On Tue, Oct 26, 2010 at 12:04 AM, Cesar Enrique Garcia Dabo wrote: >  It works "almost" fine, except for the line >    grid[i].grid(True) >  which doesn't draw the axis grid defined by the ticklabels. When using > add_subplot instead of Grid it works properly, tough, like this: > I believe this i

Re: [Matplotlib-users] How to Reduce White Space Around Figure?

2010-10-26 Thread Jae-Joon Lee
the "bbox_inches" option does not work well for your case since the axes frame (although not visible) occupy much larger area than your plot elements. Make axis limits more tighter, then try to use bbox_inches option (with this, you don't need to fiddle with subplot params). Here is my try. ax.se

Re: [Matplotlib-users] GridSpec Index Order

2010-10-26 Thread Jae-Joon Lee
know if this does not work (this is only tested w/ the svn version and may not work with v1.0). Regards, -JJ On Tue, Oct 26, 2010 at 12:30 AM, Nikolaus Rath wrote: > On 10/25/2010 11:18 AM, Jae-Joon Lee wrote: >> On Mon, Oct 25, 2010 at 10:45 PM, Nikolaus Rath wrote: >>> So I h

Re: [Matplotlib-users] legend

2010-10-26 Thread Jae-Joon Lee
One option is to use proxy artists. http://matplotlib.sourceforge.net/users/legend_guide.html#using-proxy-artist Regards, -JJ 2010/10/26 Marek Giebułtowski : > Dear All, > I use hist in pylab.I have different sets of data in different colours > in one chart. In legend all rectangulars are unfo

Re: [Matplotlib-users] Documentation on AGG filters

2010-10-31 Thread Jae-Joon Lee
On Wed, Oct 27, 2010 at 10:36 PM, Matthieu Huin wrote: > Anyone knows of a comprehensive doc or tutorial on that subject ? Unfortunately there is no such things as far as I know. The agg_filter itself has relatively simple api (from the documentation of backend_agg.stop_filter). """

Re: [Matplotlib-users] Ticks direction

2010-11-02 Thread Jae-Joon Lee
A quick (and not safe) way w/ mpl v1.0 is, ax = plt.subplot(111) ax.plot(np.arange(3)) ax.set_xticks([0, 0.5, 1., 1.5, 2.]) mytick = ax.xaxis.majorTicks[2] mytick._apply_params(tickdir="out") I don't think there is a way to do this only using public apis. I myself actually p

Re: [Matplotlib-users] Shadowed Text?

2010-11-02 Thread Jae-Joon Lee
You may use annotate with which you can specify offsets. http://matplotlib.sourceforge.net/api/pyplot_api.html?highlight=annotate#matplotlib.pyplot.annotate Or, you may consider to use the path_effect (available w/ v1.0). http://matplotlib.sourceforge.net/examples/pylab_examples/patheffect_demo.

[Matplotlib-users] pywcsgrid2 0.1b1 : matplotlib with astronomical fits images

2010-11-07 Thread Jae-Joon Lee
Hi, I am pleased to announce the release of pywcsgrid2 0.1b1. pywcsgrid2 is a python module to be used with matplotlib for displaying astronomical fits images. It provides a custom Axes class (derived from mpl's original Axes class) suitable for displaying fits images. Its main functionality is t

Re: [Matplotlib-users] text element just above previous text element

2010-11-08 Thread Jae-Joon Lee
On Tue, Nov 9, 2010 at 12:21 AM, Werner F. Bruhin wrote: > I like to have 2 or 3 text elements "stacked" on top of each other on > top of a bar. > > Currently it works for the first text element by doing: > > height = bar.get_height() > xCorr = bar.get_x() > yCorr = 0.20 + height > > txtax = axes.

Re: [Matplotlib-users] how to get legend size, try #2.

2010-11-08 Thread Jae-Joon Lee
On Sat, Oct 30, 2010 at 2:16 PM, Paul Ivanov wrote: >> Thanks Paul!  Your suggestion got me part of the way, but I've run >> into another problem...I'm using draggable legends, I'm also wanting >> to fetch the current position of the legend after a drag.  The >> draggable legend always updates 'lo

Re: [Matplotlib-users] annotate arrow drawn slightly off

2010-11-09 Thread Jae-Joon Lee
Thanks for tracking down this. It turned out to be a silly error while adjusting the line end-point. I'm attaching the patch. Please test the patch if you can. I'll commit the change sometime tomorrow. Regards, -JJ On Tue, Nov 9, 2010 at 9:15 PM, Jason Grout wrote: > I've been trying to track

Re: [Matplotlib-users] annotate arrow drawn slightly off

2010-11-09 Thread Jae-Joon Lee
On Wed, Nov 10, 2010 at 12:21 AM, Benjamin Root wrote: > On Tue, Nov 9, 2010 at 7:24 AM, Jae-Joon Lee wrote: >> >> Thanks for tracking down this. >> It turned out to be a silly error while adjusting the line end-point. >> I'm attaching the patch. Please test the

Re: [Matplotlib-users] annotate arrow drawn slightly off

2010-11-09 Thread Jae-Joon Lee
On Wed, Nov 10, 2010 at 1:01 AM, Jason Grout wrote: > Is the tip of the arrow (after the miter join) supposed to hit (1,1), or is > the center of the line supposed to hit (1,1)?  Or maybe the tip of the > joinstyle='round' arrow (the default) is supposed to hit (1,1)? > The tip of the arrow is me

Re: [Matplotlib-users] tick formatter - floating axis

2010-11-10 Thread Jae-Joon Lee
How do you want your ticklabels formatted? If axisartist does not provide a formatter that fits your need, you can create a custom formatter. Formatter for axisartist can be any callable object with following signature. def Formatter(direction, factor, values): # ... return list_of_string

Re: [Matplotlib-users] tick formatter - floating axis

2010-11-12 Thread Jae-Joon Lee
lotlib? I looked into > axisartist but can not find anything similar. > > Regards > > Stefan > > > On Thu, 2010-11-11 at 09:38 +0900, Jae-Joon Lee wrote: >> How do you want your ticklabels formatted? >> >> If axisartist does not provide a formatter that fits you

Re: [Matplotlib-users] Backgroundcolor for text

2010-11-12 Thread Jae-Joon Lee
I cannot reproduce this with agg, ps and pdf backend. Maybe this bug is specific to the Mac oS X backend? Regards, -JJ On Sat, Nov 13, 2010 at 5:19 AM, Bror Jonsson wrote: > > Dear all, > > I must be doing something wrong, but it seems like the backgroundcolor > statement for text just stoppe

Re: [Matplotlib-users] axis coords in y direction and data coords in x direction for text

2010-11-15 Thread Jae-Joon Lee
You may use annotate. annotate("Test", xy=(0.5, 0.3), xycoords=("axes fraction", "data"), ha="center") This requires v1.0 of matplotlib. http://matplotlib.sourceforge.net/users/annotations_guide.html#using-complex-coordinate-with-annotation Regards, -JJ ---

Re: [Matplotlib-users] colorbar settings with a object oriented approach (or mixed pyplot)

2010-11-21 Thread Jae-Joon Lee
On Thu, Nov 18, 2010 at 11:10 PM, John wrote: > 1) I only need one colorbar, how would I create a single colorbar on > the right that spanned across all axes? (ie. same height as the stack) There are a few options you can try. I guess the easiest way is setting up the axes manually. dy = 0.8/3.

Re: [Matplotlib-users] set font properties for colorbar

2010-11-21 Thread Jae-Joon Lee
When cax is an axes instance of the colorbar, you may use cax.tick_params(labelsize=8) If you want to directly set the FontProperties, you need to iterate over the ticks (it seems that tick_params does not support this). for tick in cax.yaxis.majorTicks: tick.label2.set_fontproperties(fp) N

Re: [Matplotlib-users] date plot with two y axes...and some other things

2010-11-21 Thread Jae-Joon Lee
On Fri, Nov 19, 2010 at 2:59 AM, C M wrote: > 2) How can I get the lines belonging to different axes to cycle > through colors such that the same color is not used for any lines > shown in the plot?  (that is, I don't want to hard code a color to any > line, I want it to auto-cycle). > ax1 = subp

Re: [Matplotlib-users] Use a marker symbol in a text string

2010-11-26 Thread Jae-Joon Lee
Here is the example that I believe that does what you want. The way it does is very similar to how legend object is created. Unfortunately, the offsetbox module, which enables this example, is not well documented. I hope the example is explanatory enough. IHTH, -JJ import matplotlib.pyplot as p

Re: [Matplotlib-users] [mplot3d] remove background

2010-11-28 Thread Jae-Joon Lee
If you want the whole background to disappear, simply call set_axis_off method. ax.set_axis_off() To control the visibility of each element, use something like below. for axis in ax.w_xaxis, ax.w_yaxis, ax.w_zaxis: for elt in axis.get_ticklines() + axis.get_ticklabels(): elt.set_visible(

Re: [Matplotlib-users] display multi languages in a string.

2010-11-28 Thread Jae-Joon Lee
Unfortunately, matplotlib does not support fontset, and only a single font file can be used at a time. If you need to to use multiple fonts within a single text string, the only workaround I can think of is to use the offsetbox module to make a text for each font and concatenate them. If you're in

Re: [Matplotlib-users] what is line._invalid in matplotlib 1.0?

2010-12-05 Thread Jae-Joon Lee
Here is a modified version of the code. Note that since it uses non-public APIs, it may stop to work again in the future. According to your original post, you seem to want to pick up points only. I guess the better way is to have a separate artists. One for points and the other for line segments.

Re: [Matplotlib-users] unable to point pick 2nd axis after upgrade to mpl 1.0

2010-12-09 Thread Jae-Joon Lee
As far as I understand, all the events in matplotlib are associated with a single Axes instance (or None). For overlapping multiple axes, the axes with highest zorder is picked up. And a "pick event only works for artists in the associated axes. While this simple approach is okay at least to me, I

Re: [Matplotlib-users] unable to point pick 2nd axis after upgrade to mpl 1.0

2010-12-09 Thread Jae-Joon Lee
> > When I was using matplotlib 0.98.5.2, I had the same code as I have now, > with two different axes, and pick events were picked up on lines belonging > to either of the axes.  Unless I'm misunderstanding, something has changed > and this used to be possible.  Is that correct? Yes, I believe th

Re: [Matplotlib-users] how do I specify the line join and cap style?

2010-12-13 Thread Jae-Joon Lee
It seems that there is no option to change join and cap style for patches (only lines have them). While there could be other ways, one workaround is to use patheffect. Below is a modified version of your example. Meanwhile, I think the situation needs to be fixed, i.e., Patches should implement s

Re: [Matplotlib-users] another incorrectly clipped PNG in the gallery

2010-12-18 Thread Jae-Joon Lee
J On Wed, Dec 15, 2010 at 4:24 AM, Daniel Hyams wrote: > I'm using it too, with excellent results.  Thanks JJ! > > >> On Tue, Dec 14, 2010 at 2:13 PM, C M wrote: >>> >>> >>> On Thu, Sep 30, 2010 at 7:55 AM, Jae-Joon Lee >>> wrote: >>&

Re: [Matplotlib-users] text annotation

2010-12-18 Thread Jae-Joon Lee
I don't think "polar" is a good fit for your case. Instead, you can simply use "data" coordinate with explicit coordinate transformation. Try something like; for i in xrange(5): theta = i*1.3+1.5 xx = center[0]+(radius-4)*math.cos(theta) yy = center[1]+(radius-4)*math.s

Re: [Matplotlib-users] jagged line in eps from matplitlib

2010-12-18 Thread Jae-Joon Lee
Can you post your eps file? This may be related to the ps rasterizer you're using. Regards, -JJ On Thu, Dec 16, 2010 at 1:46 AM, andes wrote: > > hello, > > When I save as an "eps" a figure created by matplotlib I face the problem > that the inclined lines in the plot appear to be jagged when I

Re: [Matplotlib-users] jagged line in eps from matplitlib

2010-12-19 Thread Jae-Joon Lee
d" style. In case you must use "round" style, I guess you'd better upgrade your ghostscript. Regards, -JJ On Mon, Dec 20, 2010 at 8:53 AM, andes wrote: > > Hello JJ, > > Thanks so much for replying.. > I have attached the "eps" file. > > http://old

Re: [Matplotlib-users] Drawing a circle around a letter

2010-12-28 Thread Jae-Joon Lee
With bbox parameter, you can draw a box (or a path) around a text. http://matplotlib.sourceforge.net/users/annotations_guide.html#annotating-with-text-with-box There a several box styles, but unfortunately no circle. However, you can create a custom box style. http://matplotlib.sourceforge.net/u

Re: [Matplotlib-users] hatch can not be saved as eps

2010-12-28 Thread Jae-Joon Lee
On Wed, Dec 15, 2010 at 9:25 PM, Teng Liu wrote: > But it can not be saved as an eps file. Can you elaborate what you mean by this? Does it raise an exception? Or the output is wrong? -JJ -- Learn how Oracle Real Appli

Re: [Matplotlib-users] hatch can not be saved as eps

2010-12-28 Thread Jae-Joon Lee
Benjamin, Can you post the eps file? With matplotlib from the svn, everything is fine in my system. Regards, -JJ On Thu, Dec 16, 2010 at 12:47 AM, Benjamin Root wrote: > On Wed, Dec 15, 2010 at 6:25 AM, Teng Liu wrote: >> >> Linux 2.6.32-25-generic #45-Ubuntu SMP Sat Oct 16 19:48:22 UTC 201

Re: [Matplotlib-users] edit EPS

2010-12-28 Thread Jae-Joon Lee
I would try to recover the data from the plot. I often use g3data but there should other tools. http://www.frantz.fi/software/g3data.php IHTH, -JJ On Wed, Dec 29, 2010 at 9:14 AM, crwe crwe wrote: > Hello, > > I need your help! I have an image, saved in .eps (vector) format. > > Now the imag

Re: [Matplotlib-users] Legend in a multibars chart

2011-01-06 Thread Jae-Joon Lee
On Thu, Jan 6, 2011 at 12:43 PM, Benjamin Root wrote: > I can confirm the problem, and I have a few suspects as to the cause.  Most > notably that the legend code probably assumes that it is looking for line > objects, not patch objects and starts using its own color cycler when it > can't get a l

Re: [Matplotlib-users] Using legend with a stem plot

2011-01-06 Thread Jae-Joon Lee
On Thu, Jan 6, 2011 at 1:24 PM, Benjamin Root wrote: > I apologize for how long it has taken to get back to you.  I can confirm > your bug, and it is indeed a bug.  However, I am not sure how exactly it > should be dealt with.  To prevent it from getting lost, could you please > file a report on o

Re: [Matplotlib-users] hatch can not be saved as eps

2011-01-08 Thread Jae-Joon Lee
tialiasing for paths with "round" join style. Regards, -JJ On Tue, Jan 4, 2011 at 6:23 AM, Benjamin Root wrote: > On Tue, Dec 28, 2010 at 8:25 PM, Jae-Joon Lee wrote: >> >> Benjamin, >> Can you post the eps file? >> >> With matplotlib from th

Re: [Matplotlib-users] X and Y label position in axes_grid1.AxesGrid/ImageGrid

2011-01-25 Thread Jae-Joon Lee
On Tue, Jan 25, 2011 at 10:43 AM, Russell Hewett wrote: > Though, the top and right side are technically on the outside too.  Perhaps > that should be an available or the default setting?  Perhaps the top row > should default to labeling on the top, the right column default to labeling > on the ri

Re: [Matplotlib-users] too many values to unpack with a bar chart

2011-01-26 Thread Jae-Joon Lee
On Thu, Jan 27, 2011 at 10:07 AM, C M wrote: > I know the 2nd problem is that a dictionary cannot have a mutable > object like a list as a key.  But previously, as I said, I was able to > call line, (with the comma) and it would work.  In fact, line, with a > comma gives this type: > If you just

Re: [Matplotlib-users] zoomed copy of axis for grid of subplots

2011-01-30 Thread Jae-Joon Lee
Here is the axes_grid1 version. I only attach the *axins* part. It is not identical to your original example and have difference scales. -JJ ax1 = ax[ybins-1,1] from mpl_toolkits.axes_grid1.inset_locator import zoomed_inset_axes, \ mark_inset axins = zoomed_inset_axes(parent_axes=ax1, zoom

Re: [Matplotlib-users] hide labels

2011-02-06 Thread Jae-Joon Lee
For an interactive use, you may use callbacks to update the visibility of ticks automatically. Regards, -JJ import matplotlib.transforms as mtransforms def update_yticks(ax): axis = ax.yaxis interval = axis.get_view_interval() # get visible ticks myticks = [t for t in axis.ite

Re: [Matplotlib-users] Legend outside plot?

2011-02-11 Thread Jae-Joon Lee
On Fri, Feb 11, 2011 at 8:38 AM, Jeff Layton wrote: >  I hate to be the first one to comment on this post but I forgot to give > the error message and version of matplotlib. The error is, > > Traceback (most recent call last): >   File "./multi_file_test_2.py", line 460, in >     ax.legend( (p1[0

Re: [Matplotlib-users] axisGrid - blank subplots

2011-02-28 Thread Jae-Joon Lee
You may use "ngrids" keyword parameter. i.e.,., nrows_ncols=(3,2), ngrids=5 Regards, -JJ On Tue, Mar 1, 2011 at 1:40 AM, Boyle, Jim wrote: > I am using AxesGrid (from mpl_toolkits.axes_grid1 import AxesGrid) to > generate multi-panel plots. > It does very well except I have a problem with a

Re: [Matplotlib-users] savefig bbox_inches='tight' does not consider suptitle

2011-02-28 Thread Jae-Joon Lee
On Fri, Feb 25, 2011 at 9:15 PM, Yuri D'Elia wrote: > In the following: > > <<< > import matplotlib as mpl > import matplotlib.figure > import matplotlib.backends.backend_agg > > fig = mpl.figure.Figure() > cvs = mpl.backends.backend_agg.FigureCanvasAgg(fig) > fig.set_size_inches((20,20))

Re: [Matplotlib-users] savefig bbox_inches='tight' does not consider suptitle

2011-03-07 Thread Jae-Joon Lee
On Mon, Mar 7, 2011 at 7:36 PM, Yuri D'Elia wrote: > I consider bbox_extra_artists some kind of a hack (IMHO, all artists should > be considered with a 'tight' box), but coming from gnuplot/asymptote maybe my > point of view is biased. > What would be the point of a 'tight' box that excludes par

Re: [Matplotlib-users] savefig bbox_inches='tight' does not consider suptitle

2011-03-07 Thread Jae-Joon Lee
On Tue, Mar 8, 2011 at 2:20 AM, Benjamin Root wrote: > And this appears to be a bug.  Looks like the call signature for the legend > object's get_window_extent() doesn't match the call signature for all other > artists. > Yes. It is a bug. Meanwhile, you may use bbox_extra_artists=[leg.legendPa

Re: [Matplotlib-users] Legend outside the plot

2011-03-07 Thread Jae-Joon Lee
On Mon, Mar 7, 2011 at 8:22 PM, Yuri D'Elia wrote: > With matplotlib, I have to do the following: > > legend(bbox_to_anchor=(1, 1 + ?), loc=2) > > but how do I calculate the vertical location? Maybe you want to try something like leg = legend([l1], ["Test"], borderaxespad=0, bbox_to

Re: [Matplotlib-users] demo_curvelinear_grid.py and lines over 100 points?

2011-03-08 Thread Jae-Joon Lee
This is a bug and I just pushed a fix to the git repo. Meanwhile, a workaround is l1, = ax2.plot(range(150),[10.]*150,color='g') l1._transformed_path = None l1._subslice = False Regards, -JJ On Tue, Mar 8, 2011 at 6:48 AM, Hatch, Sara J (343D) wrote: > Matlplotlib folks, > > > > I copied th

Re: [Matplotlib-users] imshow only half of each unit

2011-03-08 Thread Jae-Joon Lee
The easiest would be using a masked array. arr = np.arange(100).reshape((10,10)) iny, inx = np.indices(arr.shape) mymask=inx+iny>=10 imshow(np.ma.array(arr, mask=mymask), cmap="gray") imshow(np.ma.array(arr, mask=~mymask), cmap="jet") However, I recommend you to use the clippath. http://matplot

Re: [Matplotlib-users] Issue with imshow and usetex

2011-03-08 Thread Jae-Joon Lee
With current master at git repo, I cannot reproduce this. Both test_1.eps and test_2.eps are ~4M in size. Can you check if the file size varies significantly with rc parameters ps.usedistiller? I'm not sure how text setting can affect the images. Regards, -JJ On Tue, Mar 1, 2011 at 7:23 AM, T

Re: [Matplotlib-users] Aspect ratio of a circle

2011-03-09 Thread Jae-Joon Lee
You may use offsetbox module. Here is an complete example. Note that the circle always has a size of 25 point and also is draggable, Regards, -JJ import numpy as np import matplotlib.pyplot as plt from matplotlib.patches import CirclePolygon, Circle x = np.arange(0, 10, 0.1) y = np.exp(-x/2.

Re: [Matplotlib-users] Issue with imshow and usetex

2011-03-12 Thread Jae-Joon Lee
\n\n' + fh.read()) > RuntimeError: pdftops was not able to process your image. > Here is the full report generated by pdftops: > > I don't have a matplotlibrc file, and I am using: > > Ghostscript: GPL Ghostscript  9.00 (2010-09-14) > LaTeX: Version 3.1415926-1.40.10 (T

Re: [Matplotlib-users] Issue with imshow and usetex

2011-03-13 Thread Jae-Joon Lee
uot; with "ps2write". Regards, -JJ On Sun, Mar 13, 2011 at 1:45 AM, Thomas Robitaille wrote: > Hi Jae-Joon, > > Ok, that makes sense - I tried upgrading to 9.0.1 and it looks like there is > still an issue: > > 6204    test_1.eps > 34104   test_2.eps > &

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