spctools-discuss
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Re: [spctools-discuss] PTM Prophet Command Failure
Adam R
Re: [spctools-discuss] PTM Prophet Command Failure
Adam R
Re: [spctools-discuss] PTM Prophet Command Failure
David Shteynberg
Re: [spctools-discuss] PTM Prophet Command Failure
Adam R
Re: [spctools-discuss] PTM Prophet Command Failure
Adam R
Re: [spctools-discuss] PTM Prophet Command Failure
David Shteynberg
[spctools-discuss] How many proteins to be reported after database searching?
lwhbackup
[spctools-discuss] Spectral library generation_consensus library split
Fabia Simona
[spctools-discuss] Re: Spectral library generation_consensus library split
Fabia Simona
[spctools-discuss] SpectraST Consensus library unsplit vs. split
Fabia Simona
[spctools-discuss] Dimethylation quantification with XPRESS (TPP 5.0)
Oded
Re: [spctools-discuss] Dimethylation quantification with XPRESS (TPP 5.0)
Jimmy Eng
Re: [spctools-discuss] Dimethylation quantification with XPRESS (TPP 5.0)
Alejandro
Re: [spctools-discuss] Dimethylation quantification with XPRESS (TPP 5.0)
Jimmy Eng
Re: [spctools-discuss] Dimethylation quantification with XPRESS (TPP 5.0)
David Shteynberg
Re: [spctools-discuss] Dimethylation quantification with XPRESS (TPP 5.0)
Jimmy Eng
[spctools-discuss] Tandem search engine is getting time out after every single run.
Syed Azmal Ali
RE: [spctools-discuss] TPP Search Software not working with generated mzML files
Michael Hoopmann
Re: [spctools-discuss] TPP Search Software not working with generated mzML files
Connor Hoffmann
Re: [spctools-discuss] TPP Search Software not working with generated mzML files
Connor Hoffmann
[spctools-discuss] Error convert The GPM Human library (.hlf) to splib
Shadab Ahmad
[spctools-discuss] TPP v5.0 in Windows 7 not generating images in Xpress nor ASAP report and protxml legacy viewer not working
Alejandro
[spctools-discuss] Re: TPP v5.0 in Windows 7 not generating images in Xpress nor ASAP report and protxml legacy viewer not working
Jimmy Eng
Re: [spctools-discuss] Re: TPP v5.0 in Windows 7 not generating images in Xpress nor ASAP report and protxml legacy viewer not working
Jimmy Eng
Re: [spctools-discuss] Re: TPP v5.0 in Windows 7 not generating images in Xpress nor ASAP report and protxml legacy viewer not working
Alejandro
[spctools-discuss] How to include the iRT in the Library building mode SpecraST
Carolina
[spctools-discuss] PTMProphet -- command line
Victoria Lee
Re: [spctools-discuss] PTMProphet -- command line
David Shteynberg
[spctools-discuss] Upcoming TPP courses
Eric Deutsch
[spctools-discuss] win10:403 forbidden You don't have permission to access /tpp on this server.
ymstep2016
[spctools-discuss] SpectraST question about different charge states of candidate library spectra and query spectra
Jianqiao Shen
RE: [spctools-discuss] SpectraST question about different charge states of candidate library spectra and query spectra
Eric Deutsch
[spctools-discuss] Installing TPP on Fedora 25. Failure to build libspareparts.a.
Govind Chandra
[spctools-discuss] Analyze peptides- error
Ada A
Re: [spctools-discuss] Analyze peptides- error
David Shteynberg
Re: [spctools-discuss] Analyze peptides- error
Elkan Dong
Re: [spctools-discuss] Analyze peptides- error
David Shteynberg
Re: [spctools-discuss] Analyze peptides- error
np . dong572
Re: [spctools-discuss] Analyze peptides- error
Elkan Dong
Re: [spctools-discuss] Analyze peptides- error
David Shteynberg
Re: [spctools-discuss] Analyze peptides- error
Darya Laptanovich
[spctools-discuss] StPeter documentation
Brian Hampton
[spctools-discuss] Re: StPeter documentation
Jason Winget
Re: [spctools-discuss] Re: StPeter documentation
Hampton, Brian
Re: [spctools-discuss] Re: StPeter documentation
Filippo GENOVESE
Re: [spctools-discuss] Re: StPeter documentation
Jason Winget
RE: [spctools-discuss] Re: StPeter documentation
Michael Hoopmann
R: [spctools-discuss] Re: StPeter documentation
Filippo GENOVESE
Re: R: [spctools-discuss] Re: StPeter documentation
Jason
Re: [spctools-discuss] Re: StPeter documentation
Michael Hoopmann
[spctools-discuss] TMT 8-plex Libra Condition File Parameters
Linh Nguyen
Re: [spctools-discuss] TMT 8-plex Libra Condition File Parameters
Luis Mendoza
[spctools-discuss] for rhel based OSes (and tpp devel) - include glibc-static rpm as prerequisite to avoid: "cannot find -lpthread" & similar
lejeczek
[spctools-discuss] TPP 5.0 compilation on CentOS fails
Tomas
Re: [spctools-discuss] TPP 5.0 compilation on CentOS fails
Jimmy Eng
Re: [spctools-discuss] TPP 5.0 compilation on CentOS fails
Luis Mendoza
[spctools-discuss] release_5-0-0 build - archive_read_support_filter_lzop.c:434: undefined reference to `lzo1x_decompress_safe
lejeczek
[spctools-discuss] TPP release_5-0-0 compilation (boost) quirk
lejeczek
[spctools-discuss] comet component compliation fails
lejeczek
Re: [spctools-discuss] comet component compliation fails
Jimmy Eng
[spctools-discuss] negative probabilities in peptide prophet with results from SpectraST search with library with decoys
Carolina
Re: [spctools-discuss] negative probabilities in peptide prophet with results from SpectraST search with library with decoys
David Shteynberg
Re: [spctools-discuss] negative probabilities in peptide prophet with results from SpectraST search with library with decoys
Carolina
Re: [spctools-discuss] negative probabilities in peptide prophet with results from SpectraST search with library with decoys
Carolina
Re: [spctools-discuss] negative probabilities in peptide prophet with results from SpectraST search with library with decoys
David Shteynberg
Re: [spctools-discuss] negative probabilities in peptide prophet with results from SpectraST search with library with decoys
David Shteynberg
Re: [spctools-discuss] negative probabilities in peptide prophet with results from SpectraST search with library with decoys
Carolina
Re: [spctools-discuss] negative probabilities in peptide prophet with results from SpectraST search with library with decoys
David Shteynberg
Re: [spctools-discuss] negative probabilities in peptide prophet with results from SpectraST search with library with decoys
Carolina
Re: [spctools-discuss] negative probabilities in peptide prophet with results from SpectraST search with library with decoys
David Shteynberg
Re: [spctools-discuss] negative probabilities in peptide prophet with results from SpectraST search with library with decoys
Carolina
Re: [spctools-discuss] negative probabilities in peptide prophet with results from SpectraST search with library with decoys
Carolina
[spctools-discuss] TPP @ ASMS -- booth #127 + Tuesday Workshop
Luis Mendoza
[spctools-discuss] Peptide Prophet issues...help!
Aeon K
Re: [spctools-discuss] Peptide Prophet issues...help!
Luis Mendoza
[spctools-discuss] Re: Peptide Prophet issues...help!
David Lauenstein
[spctools-discuss] iProphet process
Yaarub Musa
Re: [spctools-discuss] iProphet process
David Shteynberg
[spctools-discuss] Re: iProphet process
Yaarub Musa
Re: [spctools-discuss] Re: iProphet process
David Shteynberg
[spctools-discuss] Re: iProphet process
Yaarub Musa
[spctools-discuss] Unable to kill command 6416! ()
Yaarub Musa
Re: [spctools-discuss] Unable to kill command 6416! ()
Luis Mendoza
Re: [spctools-discuss] Unable to kill command 6416! ()
Yaarub Musa
[spctools-discuss] Can't open spctools wiki
xu
RE: [spctools-discuss] Can't open spctools wiki
Eric Deutsch
Re: [spctools-discuss] Can't open spctools wiki
xu
[spctools-discuss] Re: Can't open spctools wiki
Jamie Walters
RE: [spctools-discuss] Re: Can't open spctools wiki
Eric Deutsch
[spctools-discuss] can't open SPC tools wiki
xu
[spctools-discuss] Advanced TPP course July 19-21
Eric Deutsch
Re: [spctools-discuss] Comet can not perform search
Jimmy Eng
Re: [spctools-discuss] Comet can not perform search
钟传奇
[spctools-discuss] idconvert error
Emma Whittington
[spctools-discuss] ProteinProphet Error (TPP 5.0.0)
Marc Isaksson
[spctools-discuss] libra calculation
richard chiang
[spctools-discuss] libra calculation
richard chiang
[spctools-discuss] TPP 5.0.0 compile error on comet.exe build: /usr/bin/ld: cannot find -lpthread
Joe
Re: [spctools-discuss] TPP 5.0.0 compile error on comet.exe build: /usr/bin/ld: cannot find -lpthread
Jimmy Eng
Re: [spctools-discuss] TPP 5.0.0 compile error on comet.exe build: /usr/bin/ld: cannot find -lpthread
J
[spctools-discuss] Re: Beginner Problem - Data Conversion from .D to .mzXML
Yuqi Shi
[spctools-discuss] Problem when using trapper to convert agilent.d into .mzXML file
Yuqi Shi
Re: [spctools-discuss] Problem when using trapper to convert agilent.d into .mzXML file
Luis Mendoza
[spctools-discuss] Parameters in X!tandem inputfile for itraq 8
richard chiang
RE: [spctools-discuss] Parameters in X!tandem inputfile for itraq 8
Eric Deutsch
Re: [spctools-discuss] Parameters in X!tandem inputfile for itraq 8
richard chiang
RE: [spctools-discuss] Parameters in X!tandem inputfile for itraq 8
Eric Deutsch
Re: [spctools-discuss] Parameters in X!tandem inputfile for itraq 8
richard chiang
Re: [spctools-discuss] Parameters in X!tandem inputfile for itraq 8
richard chiang
[spctools-discuss] Extended TMT multiplexing
Phil
[spctools-discuss] Re: Extended TMT multiplexing
Phil
[spctools-discuss] Automatic spectral library download not working?
sfghuis
Re: [spctools-discuss] Automatic spectral library download not working?
Luis Mendoza
Re: [spctools-discuss] Automatic spectral library download not working?
sfghuis
Re: [spctools-discuss] Automatic spectral library download not working?
Luis Mendoza
[spctools-discuss] Can PeptideProphet take beyond top hit for probability calculation?
Chih-Chiang Tsou
Re: [spctools-discuss] Can PeptideProphet take beyond top hit for probability calculation?
David Shteynberg
Re: [spctools-discuss] Can PeptideProphet take beyond top hit for probability calculation?
Chih-Chiang Tsou
Re: [spctools-discuss] Can PeptideProphet take beyond top hit for probability calculation?
David Shteynberg
Re: [spctools-discuss] Can PeptideProphet take beyond top hit for probability calculation?
Chih-Chiang Tsou
Re: [spctools-discuss] Can PeptideProphet take beyond top hit for probability calculation?
David Shteynberg
Re: [spctools-discuss] Can PeptideProphet take beyond top hit for probability calculation?
Chih-Chiang Tsou
[spctools-discuss] Comet search of data on D:\ [Windows 10] error
Joey Davis
Re: [spctools-discuss] Comet search of data on D:\ [Windows 10] error
Luis Mendoza
Re: [spctools-discuss] Comet search of data on D:\ [Windows 10] error
Joey Davis
Re: [spctools-discuss] Comet search of data on D:\ [Windows 10] error
Luis Mendoza
Re: [spctools-discuss] Comet search of data on D:\ [Windows 10] error
Joey Davis
Re: [spctools-discuss] Comet search of data on D:\ [Windows 10] error
Luis Mendoza
Re: [spctools-discuss] Comet search of data on D:\ [Windows 10] error
Jimmy Eng
Re: [spctools-discuss] Comet search of data on D:\ [Windows 10] error
Joey Davis
[spctools-discuss] TPP Peptide prophet – XInteract, error when using the .comet.pep.xml file but not with the corresponding .tandem file
Murielle Ålund
Re: [spctools-discuss] TPP Peptide prophet – XInteract, error when using the .comet.pep.xml file but not with the corresponding .tandem file
Luis Mendoza
[spctools-discuss] Export to Spreadsheet function doesn't work
David Zhao
Re: [spctools-discuss] Export to Spreadsheet function doesn't work
Luis Mendoza
[spctools-discuss] Database search of heavy isotope labeled peptides
Sim Kae Hwan
RE: [spctools-discuss] Database search of heavy isotope labeled peptides
Eric Deutsch
[spctools-discuss] URL /tpp/cgi-bin/tpp/cgi-bin/tpp_gui.pl was not found
Robert
Re: [spctools-discuss] URL /tpp/cgi-bin/tpp/cgi-bin/tpp_gui.pl was not found
Luis Mendoza
[spctools-discuss] How does RT model in PeptideProphet work?
Ali
[spctools-discuss] tandem.exe command line parameters (other than the input.xml file)
Mike Rightmire
[spctools-discuss] Re: tandem.exe command line parameters (other than the input.xml file)
Mike Rightmire
RE: [spctools-discuss] Re: tandem.exe command line parameters (other than the input.xml file)
Eric Deutsch
Re: [spctools-discuss] Re: tandem.exe command line parameters (other than the input.xml file)
Mike Rightmire
RE: [spctools-discuss] Re: tandem.exe command line parameters (other than the input.xml file)
Eric Deutsch
Re: [spctools-discuss] Re: tandem.exe command line parameters (other than the input.xml file)
Mike Rightmire
[spctools-discuss] tpp_gui.pl: Error: invoking tpp_hostname to look up installation property 'HomePath!'
Mike Rightmire
Re: [spctools-discuss] tpp_gui.pl: Error: invoking tpp_hostname to look up installation property 'HomePath!'
Luis Mendoza
RE: [spctools-discuss] tpp_gui.pl: Error: invoking tpp_hostname to look up installation property 'HomePath!'
Eric Deutsch
[spctools-discuss] No rule to make target `/usr/local/tpp/bin/crypt', needed by `install'. Stop.
Mike Rightmire
Re: [spctools-discuss] No rule to make target `/usr/local/tpp/bin/crypt', needed by `install'. Stop.
Luis Mendoza
[spctools-discuss] prevent xinteract from creating output?
Jesse
Re: [spctools-discuss] prevent xinteract from creating output?
Luis Mendoza
Re: [spctools-discuss] TPP update paths, return code 512, printscreen attached
michaela . filiou
[spctools-discuss] TPP 5.0 Compilation problem on Linux(es), TARGET/ pwiz
Robert
Re: [spctools-discuss] TPP 5.0 Compilation problem on Linux(es), TARGET/ pwiz
Luis Mendoza
Re: [spctools-discuss] Comet search not working in TPP; return code: 256
Luis Mendoza
Re: [spctools-discuss] Comet search not working in TPP; return code: 256
Francesca Barry
[spctools-discuss] Problems installing TPP 5.0 on Linux
Cedar McKay
Re: [spctools-discuss] Problems installing TPP 5.0 on Linux
Luis Mendoza
Re: [spctools-discuss] Problems installing TPP 5.0 on Linux
Cedar McKay
Re: [spctools-discuss] Problems installing TPP 5.0 on Linux
Luis Mendoza
[spctools-discuss] msconvert not working with TPP 5.0 on windows
Cedar McKay
Re: [spctools-discuss] msconvert not working with TPP 5.0 on windows
Luis Mendoza
Re: [spctools-discuss] msconvert not working with TPP 5.0 on windows
Cedar McKay
[spctools-discuss] TPP update paths error, return code 512
michaela . filiou
[spctools-discuss] update paths, command failed, return code:512
Michaela Filiou
[spctools-discuss] Spectra assignment in libra/peptideprophet
Veit Schwaemmle
Re: [spctools-discuss] Spectra assignment in libra/peptideprophet
Luis Mendoza
Re: [spctools-discuss] Spectra assignment in libra/peptideprophet
Veit Schwaemmle
[spctools-discuss] Data file on a network drive?
Chris Barnes
Re: [spctools-discuss] Data file on a network drive?
Luis Mendoza
Re: [spctools-discuss] Data file on a network drive?
Vis Sw
Re: [spctools-discuss] Data file on a network drive?
Chris Barnes
Re: [spctools-discuss] Data file on a network drive?
Vis Sw
Re: [spctools-discuss] Query regarding searching in Comet in TPP
Jimmy Eng
[spctools-discuss] ProteinPilot-Search -> PepXML -> PeptideProphet
Ivan Silbern
Re: [spctools-discuss] ProteinPilot-Search -> PepXML -> PeptideProphet
David Shteynberg
RE: [spctools-discuss] Error while conversion of files
Eric Deutsch
Re: [spctools-discuss] Error while conversion of files
Joel Christie
RE: [spctools-discuss] Error while conversion of files
Eric Deutsch
RE: [spctools-discuss] Error while conversion of files
Eric Deutsch
Re: [spctools-discuss] Error while conversion of files
Luis Mendoza
Re: [spctools-discuss] Error while conversion of files
Jimmy Eng
[spctools-discuss] PeptideProphetParser error on Kojak searches
Van Kelly
Re: [spctools-discuss] PeptideProphetParser error on Kojak searches
David Shteynberg
[spctools-discuss] SQT file to text file
gaurav saxena
Re: [spctools-discuss] SQT file to text file
Jimmy Eng
Re: [spctools-discuss] SQT file to text file
gaurav saxena
Re: [spctools-discuss] SQT file to text file
Jimmy Eng
[spctools-discuss] pepxml to mzid file conversion
Francesca Barry
Re: [spctools-discuss] pepxml to mzid file conversion
Robert Winkler
[spctools-discuss] Re: pepxml to mzid file conversion
Francesca Barry
[spctools-discuss] Spectrast slow processing with .msp file under Linux
Jianqiao Shen
RE: [spctools-discuss] Spectrast slow processing with .msp file under Linux
Eric Deutsch
[spctools-discuss] Re: Spectrast slow processing with .msp file under Linux
Jianqiao Shen
RE: [spctools-discuss] Re: Spectrast slow processing with .msp file under Linux
Eric Deutsch
[spctools-discuss] RT and RTCAT options in PeptideProphet
Ali
Re: [spctools-discuss] RT and RTCAT options in PeptideProphet
David Shteynberg
Re: [spctools-discuss] RT and RTCAT options in PeptideProphet
Ali
[spctools-discuss] query on TPP(X!Tandem)
PRATIP SAHA
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