Re: Lost Connection Upon Loading Dump

2016-04-21 Thread Peter Brawley

On 4/21/2016 10:51, Stephen R Guglielmo wrote:

Hello,

I have a empty db that I'm trying to load a .sql file (created via
mysqldump) into. The dump has 791611 lines and is 807 MB. Loading the
dump is consistently failing at line 1763. Line 1763 is an INSERT
statement. The line is 95610 characters long.

The error is:
ERROR 2013 (HY000) at line 1763: Lost connection to MySQL server during query

About 40 tables are restored correctly from the dump prior to it
failing at this line.

Based on advice from posts I've found on the internet, I've added the
follow settings to my.cnf
net_read_timeout=60
# 16 MB
max_allowed_packet=16777216

I added these to both the [mysqld] and [mysqld_safe] sections to be
sure. I restarted mysqld, but still get the same error upon loading
the dump.

I'm not seeing anything in my error log (do I need to enable more
verbose error logging?).

MySQL Ver 14.12 Distrib 5.0.95, for redhat-linux-gnu (x86_64) using readline 5.1

I would appreciate any advice on figuring this out.


Slow: change the mysqldump params to turn off multiple inserts per
statement, and run the dump again.

Faster: grow the mysqldump net_buffer_length setting, and the mysqld setting of 
the same name, to accommodate the largest multiple insert. You may also have to 
grow max_allowed_packet.

PB

-




Thanks,
Steve




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Lost Connection Upon Loading Dump

2016-04-21 Thread Stephen R Guglielmo
Hello,

I have a empty db that I'm trying to load a .sql file (created via
mysqldump) into. The dump has 791611 lines and is 807 MB. Loading the
dump is consistently failing at line 1763. Line 1763 is an INSERT
statement. The line is 95610 characters long.

The error is:
ERROR 2013 (HY000) at line 1763: Lost connection to MySQL server during query

About 40 tables are restored correctly from the dump prior to it
failing at this line.

Based on advice from posts I've found on the internet, I've added the
follow settings to my.cnf
net_read_timeout=60
# 16 MB
max_allowed_packet=16777216

I added these to both the [mysqld] and [mysqld_safe] sections to be
sure. I restarted mysqld, but still get the same error upon loading
the dump.

I'm not seeing anything in my error log (do I need to enable more
verbose error logging?).

MySQL Ver 14.12 Distrib 5.0.95, for redhat-linux-gnu (x86_64) using readline 5.1

I would appreciate any advice on figuring this out.

Thanks,
Steve

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Re: ERROR 2013 (HY000): Lost connection to MySQL server during query

2014-01-08 Thread Manuel Arostegui
2014/1/7 h...@tbbs.net

  2014/01/06 17:07 +0100, Reindl Harald 
 what about look in the servers logfiles
 most likely max_allowed_packet laughable low
 
 Is this then, too, likly when the server and the client are the same
 machine?

 I left this out, that it only then happens when the client has been idle,
 and right afterwards the client repeats the request and all goes well. The
 message is no more than an irritatind break between request and fulfillment.

 Hello,

That happens when you're trying to re-use an existing connection which
wasn't properly closed and as you said, it's been idle. When you repeat the
operation, the thread is created again and thus everything goes normal.

Review the following variables

wait_timeout
net_write_timeout
net_read_timeout


Manu


Re: ERROR 2013 (HY000): Lost connection to MySQL server during query

2014-01-07 Thread hsv
 2014/01/06 17:07 +0100, Reindl Harald 
what about look in the servers logfiles
most likely max_allowed_packet laughable low 

Is this then, too, likly when the server and the client are the same machine?

I left this out, that it only then happens when the client has been idle, and 
right afterwards the client repeats the request and all goes well. The message 
is no more than an irritatind break between request and fulfillment.


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ERROR 2013 (HY000): Lost connection to MySQL server during query

2014-01-06 Thread hsv
Now that I installed 5.6.14 on our Vista machine, when using mysql I often 
see that error-message, which under 5.5.8 I never saw. What is going on?


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Re: ERROR 2013 (HY000): Lost connection to MySQL server during query

2014-01-06 Thread Reindl Harald


Am 06.01.2014 15:36, schrieb h...@tbbs.net:
 Now that I installed 5.6.14 on our Vista machine, when using mysql I often 
 see that error-message, which under 5.5.8 I never saw. What is going on?

what about look in the servers logfiles
most likely max_allowed_packet laughable low



signature.asc
Description: OpenPGP digital signature


Lost connection to MySQL server - need help.

2013-10-12 Thread Jørn Dahl-Stamnes
Hello,

I got a strange problem related to a production server. It has been working OK 
for months, but yesterday it start to fail. There are several batch scripts 
using the database in addition to a web application using it.

The php scripts running in batch mode began to get:

mysql_connect(): Lost connection to MySQL server at 'reading initial 
communication packet', system error: 111

I stopped the server and restarted it and everything seems to work OK for 
hours but when the load start to increase, the errors begin to appear again.

Today I noticed that after I starte phpMyAdmin and selected one of the 
databases, phpMyAdmin was hanging and the batch scripts began to fail again. 
Seems like the server does not handle much load anymore.


What's strange is the memory usage. The server is a quad core cpu with 48 Gb 
memory, where 28 Gb is allocated to innodb (we mostly use innodb). But when 
using top command, I noticed this:

VIRT: 33.9g
RES: 9.4g
SWAP: 23g

at this time over 11G memory is free. vm.swappiness is set to 0. I find it 
strange that the server is not able to use physical memory but use swap 
instead. The amount of cpu time used for swapping is rather high during sql 
queries. The amount of RESident memory may increase slowly over time but very 
slowly (it can take hours before it increase to 20+ Gb).

[PS: I also got a MySQL server running at a dedicated host at home, where the 
it seem to use the memory as I except it to use:

  PID USER  PR  NI  VIRT  RES  SHR S %CPU %MEMTIME+  SWAP DATA COMMAND
 1462 mysql 20   0 30.0g  27g 3900 S  0.3 87.3   2633:14 844m  29g mysqld
]


I would like to have some suggestions what I can do to solve this problem.
I have google'd it but found nothing that seem to solve my case.

Server:
  OS: Debian 6
  MySQL: 5.1.61-0+squeeze1

my.cnf:
#
# The MySQL database server configuration file.
#

[client]
port= 3306
socket  = /var/run/mysqld/mysqld.sock

# Here is entries for some specific programs
# The following values assume you have at least 32M ram

# This was formally known as [safe_mysqld].
[mysqld_safe]
socket  = /var/run/mysqld/mysqld.sock
nice= 0

[mysqld]
#
# * Basic Settings
#
user= mysql
pid-file= /var/run/mysqld/mysqld.pid
socket  = /var/run/mysqld/mysqld.sock
port= 3306
basedir = /usr
datadir = /database/mysql
tmpdir  = /tmp
language= /usr/share/mysql/english
skip-external-locking
#
# Instead of skip-networking the default is now to listen only on
# localhost which is more compatible and is not less secure.
bind-address= 127.0.0.1
## All applications use 127.0.0.1 when connectiong to the db.

#
# * Fine Tuning
#
#key_buffer = 16M
max_allowed_packet  = 64M
thread_stack= 192K
#thread_cache_size   = 8

# This replaces the startup script and checks MyISAM tables if needed
# the first time they are touched
myisam-recover = BACKUP
#
# * Query Cache Configuration
#
query_cache_limit   = 1M

#
# The following can be used as easy to replay backup logs or for replication.
# note: if you are setting up a replication slave, see README.Debian about
#   other settings you may need to change.
#server-id  = 1
#log_bin= /var/log/mysql/mysql-bin.log
expire_logs_days= 10
max_binlog_size = 100M
#binlog_do_db   = include_database_name
#binlog_ignore_db   = include_database_name
#
# * InnoDB
#
# InnoDB is enabled by default with a 10MB datafile in /var/lib/mysql/.
# Read the manual for more InnoDB related options. There are many!

thread_cache_size = 192
table_cache = 768
## key_buffer = 64M
## sort_buffer_size = 256K
## read_buffer_size = 256K
## read_rnd_buffer_size = 256K
tmp_table_size=32M
max_heap_table_size=32M
query_cache_size=128M
query_cache_type=2

innodb_open_files=1000
innodb_buffer_pool_size = 28G
innodb_additional_mem_pool_size = 8M
innodb_flush_log_at_trx_commit = 1
innodb_support_xa = 0
innodb_lock_wait_timeout = 50
## innodb_flush_method=O_DIRECT
innodb_log_files_in_group = 2
## innodb_log_file_size = 128M
innodb_log_buffer_size = 8M
innodb_thread_concurrency = 14
innodb_file_per_table

max_connections = 100
binlog_cache_size   = 1M
sort_buffer_size= 16M
join_buffer_size= 16M
ft_min_word_len = 1
ft_max_word_len = 84
ft_stopword_file= ''
default_table_type  = InnoDB
key_buffer  = 2G
read_buffer_size= 2M
read_rnd_buffer_size= 16M
bulk_insert_buffer_size = 64M
myisam_sort_buffer_size = 128M
myisam_max_sort_file_size   = 10G
myisam_max_extra_sort_file_size = 10G
myisam_repair_threads   = 1
myisam_recover

[mysqldump]
quick
quote-names
max_allowed_packet = 16M

[mysql]
#no-auto-rehash # faster start of mysql but no tab

Re: Lost connection to MySQL server - need help.

2013-10-12 Thread nixofortune

You might want to comment

bind-address= 127.0.0.1

in your my.cnf and restart mysql server.



On 12/10/13 10:49, Jørn Dahl-Stamnes wrote:

Hello,

I got a strange problem related to a production server. It has been working OK
for months, but yesterday it start to fail. There are several batch scripts
using the database in addition to a web application using it.

The php scripts running in batch mode began to get:

mysql_connect(): Lost connection to MySQL server at 'reading initial
communication packet', system error: 111

I stopped the server and restarted it and everything seems to work OK for
hours but when the load start to increase, the errors begin to appear again.

Today I noticed that after I starte phpMyAdmin and selected one of the
databases, phpMyAdmin was hanging and the batch scripts began to fail again.
Seems like the server does not handle much load anymore.


What's strange is the memory usage. The server is a quad core cpu with 48 Gb
memory, where 28 Gb is allocated to innodb (we mostly use innodb). But when
using top command, I noticed this:

VIRT: 33.9g
RES: 9.4g
SWAP: 23g

at this time over 11G memory is free. vm.swappiness is set to 0. I find it
strange that the server is not able to use physical memory but use swap
instead. The amount of cpu time used for swapping is rather high during sql
queries. The amount of RESident memory may increase slowly over time but very
slowly (it can take hours before it increase to 20+ Gb).

[PS: I also got a MySQL server running at a dedicated host at home, where the
it seem to use the memory as I except it to use:

   PID USER  PR  NI  VIRT  RES  SHR S %CPU %MEMTIME+  SWAP DATA COMMAND
  1462 mysql 20   0 30.0g  27g 3900 S  0.3 87.3   2633:14 844m  29g mysqld
]


I would like to have some suggestions what I can do to solve this problem.
I have google'd it but found nothing that seem to solve my case.

Server:
   OS: Debian 6
   MySQL: 5.1.61-0+squeeze1

my.cnf:
#
# The MySQL database server configuration file.
#

[client]
port= 3306
socket  = /var/run/mysqld/mysqld.sock

# Here is entries for some specific programs
# The following values assume you have at least 32M ram

# This was formally known as [safe_mysqld].
[mysqld_safe]
socket  = /var/run/mysqld/mysqld.sock
nice= 0

[mysqld]
#
# * Basic Settings
#
user= mysql
pid-file= /var/run/mysqld/mysqld.pid
socket  = /var/run/mysqld/mysqld.sock
port= 3306
basedir = /usr
datadir = /database/mysql
tmpdir  = /tmp
language= /usr/share/mysql/english
skip-external-locking
#
# Instead of skip-networking the default is now to listen only on
# localhost which is more compatible and is not less secure.
bind-address= 127.0.0.1
## All applications use 127.0.0.1 when connectiong to the db.

#
# * Fine Tuning
#
#key_buffer = 16M
max_allowed_packet  = 64M
thread_stack= 192K
#thread_cache_size   = 8

# This replaces the startup script and checks MyISAM tables if needed
# the first time they are touched
myisam-recover = BACKUP
#
# * Query Cache Configuration
#
query_cache_limit   = 1M

#
# The following can be used as easy to replay backup logs or for replication.
# note: if you are setting up a replication slave, see README.Debian about
#   other settings you may need to change.
#server-id  = 1
#log_bin= /var/log/mysql/mysql-bin.log
expire_logs_days= 10
max_binlog_size = 100M
#binlog_do_db   = include_database_name
#binlog_ignore_db   = include_database_name
#
# * InnoDB
#
# InnoDB is enabled by default with a 10MB datafile in /var/lib/mysql/.
# Read the manual for more InnoDB related options. There are many!

thread_cache_size = 192
table_cache = 768
## key_buffer = 64M
## sort_buffer_size = 256K
## read_buffer_size = 256K
## read_rnd_buffer_size = 256K
tmp_table_size=32M
max_heap_table_size=32M
query_cache_size=128M
query_cache_type=2

innodb_open_files=1000
innodb_buffer_pool_size = 28G
innodb_additional_mem_pool_size = 8M
innodb_flush_log_at_trx_commit = 1
innodb_support_xa = 0
innodb_lock_wait_timeout = 50
## innodb_flush_method=O_DIRECT
innodb_log_files_in_group = 2
## innodb_log_file_size = 128M
innodb_log_buffer_size = 8M
innodb_thread_concurrency = 14
innodb_file_per_table

max_connections = 100
binlog_cache_size   = 1M
sort_buffer_size= 16M
join_buffer_size= 16M
ft_min_word_len = 1
ft_max_word_len = 84
ft_stopword_file= ''
default_table_type  = InnoDB
key_buffer  = 2G
read_buffer_size= 2M
read_rnd_buffer_size= 16M
bulk_insert_buffer_size = 64M
myisam_sort_buffer_size = 128M
myisam_max_sort_file_size   = 10G
myisam_max_extra_sort_file_size = 10G
myisam_repair_threads

Re: Lost connection to MySQL server - need help.

2013-10-12 Thread Jørn Dahl-Stamnes
On Saturday 12 October 2013 12:01, nixofortune wrote:
 You might want to comment

 bind-address= 127.0.0.1

 in your my.cnf and restart mysql server.

It does not explain why it works under low load and not under high load.

However, I seem to have found something. When I started phpMyAdmin and 
selected one of the database, the server went away again and I found this 
in /var/log/syslog:

Oct 12 11:53:33 cebycny mysqld: 131012 11:53:33  InnoDB: Assertion failure in 
thread 140182892447488 in file ../../../storage/innobase/handler/ha_innodb.cc 
line
 8066
Oct 12 11:53:33 cebycny mysqld: InnoDB: Failing assertion: auto_inc  0
Oct 12 11:53:33 cebycny mysqld: InnoDB: We intentionally generate a memory 
trap.
Oct 12 11:53:33 cebycny mysqld: InnoDB: Submit a detailed bug report to 
http://bugs.mysql.com.
Oct 12 11:53:33 cebycny mysqld: InnoDB: If you get repeated assertion failures 
or crashes, even
Oct 12 11:53:33 cebycny mysqld: InnoDB: immediately after the mysqld startup, 
there may be
Oct 12 11:53:33 cebycny mysqld: InnoDB: corruption in the InnoDB tablespace. 
Please refer to
Oct 12 11:53:33 cebycny mysqld: InnoDB: 
http://dev.mysql.com/doc/refman/5.1/en/forcing-innodb-recovery.html
Oct 12 11:53:33 cebycny mysqld: InnoDB: about forcing recovery.
Oct 12 11:53:33 cebycny mysqld: 09:53:33 UTC - mysqld got signal 6 ;
Oct 12 11:53:33 cebycny mysqld: This could be because you hit a bug. It is 
also possible that this binary
Oct 12 11:53:33 cebycny mysqld: or one of the libraries it was linked against 
is corrupt, improperly built,
Oct 12 11:53:33 cebycny mysqld: or misconfigured. This error can also be 
caused by malfunctioning hardware.
Oct 12 11:53:33 cebycny mysqld: We will try our best to scrape up some info 
that will hopefully help
Oct 12 11:53:33 cebycny mysqld: diagnose the problem, but since we have 
already crashed,
Oct 12 11:53:33 cebycny mysqld: something is definitely wrong and this may 
fail.
Oct 12 11:53:33 cebycny mysqld:
Oct 12 11:53:33 cebycny mysqld: key_buffer_size=2147483648
Oct 12 11:53:33 cebycny mysqld: read_buffer_size=2097152
Oct 12 11:53:33 cebycny mysqld: max_used_connections=8
Oct 12 11:53:33 cebycny mysqld: max_threads=100
Oct 12 11:53:33 cebycny mysqld: thread_count=2
Oct 12 11:53:33 cebycny mysqld: connection_count=2
Oct 12 11:53:33 cebycny mysqld: It is possible that mysqld could use up to
Oct 12 11:53:33 cebycny mysqld: key_buffer_size + (read_buffer_size + 
sort_buffer_size)*max_threads = 3941387 K  bytes of memory
Oct 12 11:53:33 cebycny mysqld: Hope that's ok; if not, decrease some 
variables in the equation.
Oct 12 11:53:33 cebycny mysqld:
Oct 12 11:53:33 cebycny mysqld: Thread pointer: 0x7f7f1bf997c0
Oct 12 11:53:33 cebycny mysqld: Attempting backtrace. You can use the 
following information to find out
Oct 12 11:53:33 cebycny mysqld: where mysqld died. If you see no messages 
after this, something went
Oct 12 11:53:33 cebycny mysqld: terribly wrong...
Oct 12 11:53:33 cebycny mysqld: stack_bottom = 7f7edf81fe88 thread_stack 
0x3
Oct 12 11:53:33 cebycny mysqld: /usr/sbin/mysqld(my_print_stacktrace+0x29) 
[0x7f7edff62b59]
Oct 12 11:53:33 cebycny mysqld: /usr/sbin/mysqld(handle_fatal_signal+0x483) 
[0x7f7edfd774a3]
Oct 12 11:53:33 cebycny mysqld: /lib/libpthread.so.0(+0xeff0) [0x7f7edf4c9ff0]
Oct 12 11:53:33 cebycny mysqld: /lib/libc.so.6(gsignal+0x35) [0x7f7eddf6c1b5]
Oct 12 11:53:33 cebycny mysqld: /lib/libc.so.6(abort+0x180) [0x7f7eddf6efc0]
Oct 12 11:53:33 cebycny 
mysqld: /usr/sbin/mysqld(ha_innobase::innobase_peek_autoinc()+0x8f) 
[0x7f7edfe1fa2f]
Oct 12 11:53:33 cebycny 
mysqld: /usr/sbin/mysqld(ha_innobase::info_low(unsigned int, bool)+0x18f) 
[0x7f7edfe2524f]
Oct 12 11:53:33 cebycny 
mysqld: 
/usr/sbin/mysqld(ha_innobase::update_create_info(st_ha_create_information*)+0x29)
 
[0x7f7edfe256b9]
Oct 12 11:53:33 cebycny mysqld: /usr/sbin/mysqld(+0x49e3dc) [0x7f7edfd953dc]
Oct 12 11:53:33 cebycny mysqld: /usr/sbin/mysqld(mysqld_show_create(THD*, 
TABLE_LIST*)+0x7a8) [0x7f7edfd9d388]
Oct 12 11:53:33 cebycny 
mysqld: /usr/sbin/mysqld(mysql_execute_command(THD*)+0x184a) [0x7f7edfc7cb0a]
Oct 12 11:53:33 cebycny mysqld: /usr/sbin/mysqld(mysql_parse(THD*, char*, 
unsigned int, char const**)+0x3fb) [0x7f7edfc80dbb]
Oct 12 11:53:33 cebycny 
mysqld: /usr/sbin/mysqld(dispatch_command(enum_server_command, THD*, char*, 
unsigned int)+0x115a) [0x7f7edfc81f2a]
Oct 12 11:53:33 cebycny mysqld: /usr/sbin/mysqld(do_command(THD*)+0xea) 
[0x7f7edfc8285a]
Oct 12 11:53:33 cebycny mysqld: /usr/sbin/mysqld(handle_one_connection+0x235) 
[0x7f7edfc74435]
Oct 12 11:53:33 cebycny mysqld: /lib/libpthread.so.0(+0x68ca) [0x7f7edf4c18ca]
Oct 12 11:53:33 cebycny mysqld: /lib/libc.so.6(clone+0x6d) [0x7f7ede00992d]
Oct 12 11:53:33 cebycny mysqld:
Oct 12 11:53:33 cebycny mysqld: Trying to get some variables.
Oct 12 11:53:33 cebycny mysqld: Some pointers may be invalid and cause the 
dump to abort.
Oct 12 11:53:33 cebycny mysqld: Query (7f7f1c0dcbc0): SHOW CREATE TABLE 
`calculation`
Oct 12 

Re: Lost connection to MySQL server - need help.

2013-10-12 Thread Andrew Moore
Could be a crash related to innodb data dictionary being out of sync. Could
be a bug.

http://bugs.mysql.com/bug.php?id=55277
On 12 Oct 2013 11:21, Jørn Dahl-Stamnes sq...@dahl-stamnes.net wrote:

 On Saturday 12 October 2013 12:01, nixofortune wrote:
  You might want to comment
 
  bind-address= 127.0.0.1
 
  in your my.cnf and restart mysql server.

 It does not explain why it works under low load and not under high load.

 However, I seem to have found something. When I started phpMyAdmin and
 selected one of the database, the server went away again and I found this
 in /var/log/syslog:

 Oct 12 11:53:33 cebycny mysqld: 131012 11:53:33  InnoDB: Assertion failure
 in
 thread 140182892447488 in file
 ../../../storage/innobase/handler/ha_innodb.cc
 line
  8066
 Oct 12 11:53:33 cebycny mysqld: InnoDB: Failing assertion: auto_inc  0
 Oct 12 11:53:33 cebycny mysqld: InnoDB: We intentionally generate a memory
 trap.
 Oct 12 11:53:33 cebycny mysqld: InnoDB: Submit a detailed bug report to
 http://bugs.mysql.com.
 Oct 12 11:53:33 cebycny mysqld: InnoDB: If you get repeated assertion
 failures
 or crashes, even
 Oct 12 11:53:33 cebycny mysqld: InnoDB: immediately after the mysqld
 startup,
 there may be
 Oct 12 11:53:33 cebycny mysqld: InnoDB: corruption in the InnoDB
 tablespace.
 Please refer to
 Oct 12 11:53:33 cebycny mysqld: InnoDB:
 http://dev.mysql.com/doc/refman/5.1/en/forcing-innodb-recovery.html
 Oct 12 11:53:33 cebycny mysqld: InnoDB: about forcing recovery.
 Oct 12 11:53:33 cebycny mysqld: 09:53:33 UTC - mysqld got signal 6 ;
 Oct 12 11:53:33 cebycny mysqld: This could be because you hit a bug. It is
 also possible that this binary
 Oct 12 11:53:33 cebycny mysqld: or one of the libraries it was linked
 against
 is corrupt, improperly built,
 Oct 12 11:53:33 cebycny mysqld: or misconfigured. This error can also be
 caused by malfunctioning hardware.
 Oct 12 11:53:33 cebycny mysqld: We will try our best to scrape up some info
 that will hopefully help
 Oct 12 11:53:33 cebycny mysqld: diagnose the problem, but since we have
 already crashed,
 Oct 12 11:53:33 cebycny mysqld: something is definitely wrong and this may
 fail.
 Oct 12 11:53:33 cebycny mysqld:
 Oct 12 11:53:33 cebycny mysqld: key_buffer_size=2147483648
 Oct 12 11:53:33 cebycny mysqld: read_buffer_size=2097152
 Oct 12 11:53:33 cebycny mysqld: max_used_connections=8
 Oct 12 11:53:33 cebycny mysqld: max_threads=100
 Oct 12 11:53:33 cebycny mysqld: thread_count=2
 Oct 12 11:53:33 cebycny mysqld: connection_count=2
 Oct 12 11:53:33 cebycny mysqld: It is possible that mysqld could use up to
 Oct 12 11:53:33 cebycny mysqld: key_buffer_size + (read_buffer_size +
 sort_buffer_size)*max_threads = 3941387 K  bytes of memory
 Oct 12 11:53:33 cebycny mysqld: Hope that's ok; if not, decrease some
 variables in the equation.
 Oct 12 11:53:33 cebycny mysqld:
 Oct 12 11:53:33 cebycny mysqld: Thread pointer: 0x7f7f1bf997c0
 Oct 12 11:53:33 cebycny mysqld: Attempting backtrace. You can use the
 following information to find out
 Oct 12 11:53:33 cebycny mysqld: where mysqld died. If you see no messages
 after this, something went
 Oct 12 11:53:33 cebycny mysqld: terribly wrong...
 Oct 12 11:53:33 cebycny mysqld: stack_bottom = 7f7edf81fe88 thread_stack
 0x3
 Oct 12 11:53:33 cebycny mysqld: /usr/sbin/mysqld(my_print_stacktrace+0x29)
 [0x7f7edff62b59]
 Oct 12 11:53:33 cebycny mysqld: /usr/sbin/mysqld(handle_fatal_signal+0x483)
 [0x7f7edfd774a3]
 Oct 12 11:53:33 cebycny mysqld: /lib/libpthread.so.0(+0xeff0)
 [0x7f7edf4c9ff0]
 Oct 12 11:53:33 cebycny mysqld: /lib/libc.so.6(gsignal+0x35)
 [0x7f7eddf6c1b5]
 Oct 12 11:53:33 cebycny mysqld: /lib/libc.so.6(abort+0x180)
 [0x7f7eddf6efc0]
 Oct 12 11:53:33 cebycny
 mysqld: /usr/sbin/mysqld(ha_innobase::innobase_peek_autoinc()+0x8f)
 [0x7f7edfe1fa2f]
 Oct 12 11:53:33 cebycny
 mysqld: /usr/sbin/mysqld(ha_innobase::info_low(unsigned int, bool)+0x18f)
 [0x7f7edfe2524f]
 Oct 12 11:53:33 cebycny
 mysqld:
 /usr/sbin/mysqld(ha_innobase::update_create_info(st_ha_create_information*)+0x29)
 [0x7f7edfe256b9]
 Oct 12 11:53:33 cebycny mysqld: /usr/sbin/mysqld(+0x49e3dc)
 [0x7f7edfd953dc]
 Oct 12 11:53:33 cebycny mysqld: /usr/sbin/mysqld(mysqld_show_create(THD*,
 TABLE_LIST*)+0x7a8) [0x7f7edfd9d388]
 Oct 12 11:53:33 cebycny
 mysqld: /usr/sbin/mysqld(mysql_execute_command(THD*)+0x184a)
 [0x7f7edfc7cb0a]
 Oct 12 11:53:33 cebycny mysqld: /usr/sbin/mysqld(mysql_parse(THD*, char*,
 unsigned int, char const**)+0x3fb) [0x7f7edfc80dbb]
 Oct 12 11:53:33 cebycny
 mysqld: /usr/sbin/mysqld(dispatch_command(enum_server_command, THD*, char*,
 unsigned int)+0x115a) [0x7f7edfc81f2a]
 Oct 12 11:53:33 cebycny mysqld: /usr/sbin/mysqld(do_command(THD*)+0xea)
 [0x7f7edfc8285a]
 Oct 12 11:53:33 cebycny mysqld:
 /usr/sbin/mysqld(handle_one_connection+0x235)
 [0x7f7edfc74435]
 Oct 12 11:53:33 cebycny mysqld: /lib/libpthread.so.0(+0x68ca)
 [0x7f7edf4c18ca]
 Oct 12 11:53:33 cebycny mysqld: /lib/libc.so.6(clone+0x6d) [0x7f7ede00992d]
 Oct 12 

Re: Lost connection to MySQL server - need help.

2013-10-12 Thread Jørn Dahl-Stamnes
On Saturday 12 October 2013 13:07, Andrew Moore wrote:
 Could be a crash related to innodb data dictionary being out of sync. Could
 be a bug.

Seems like a bug yes. However, we had a strange situation yesterday when we 
had several processes in the state copying to tmp table (if i remember the 
exact phrase). After witing 2 seconds, I restarted the server. It seemed 
to work OK until the backup started.

Perhaps we should restore the database that I suspect cause this, in order to 
rebuild the complete database.

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homepage: http://photo.dahl-stamnes.net/

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Re: Lost connection to MySQL server - need help.

2013-10-12 Thread Reindl Harald


Am 12.10.2013 17:02, schrieb Jørn Dahl-Stamnes:
 On Saturday 12 October 2013 13:07, Andrew Moore wrote:
 Could be a crash related to innodb data dictionary being out of sync. Could
 be a bug.
 
 Seems like a bug yes. However, we had a strange situation yesterday when we 
 had several processes in the state copying to tmp table (if i remember the 
 exact phrase). After witing 2 seconds, I restarted the server. It seemed 
 to work OK until the backup started

so someone did optimize table on a large table
you do yourself not a favour restarting the server in such a moment



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Re: Lost connection to MySQL server - need help.

2013-10-12 Thread Jørn Dahl-Stamnes
On Saturday 12 October 2013 17:36, Reindl Harald wrote:
 so someone did optimize table on a large table
 you do yourself not a favour restarting the server in such a moment

7 hours before the server was shut down, we did a alter table to add a primary 
key to a table that is read-only from the web application.

-- 
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homepage: http://photo.dahl-stamnes.net/

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Re: Lost connection to MySQL server - need help.

2013-10-12 Thread Reindl Harald


Am 12.10.2013 19:45, schrieb Jørn Dahl-Stamnes:
 On Saturday 12 October 2013 17:36, Reindl Harald wrote:
 so someone did optimize table on a large table
 you do yourself not a favour restarting the server in such a moment
 
 7 hours before the server was shut down, we did a alter table to add a 
 primary 
 key to a table that is read-only from the web application.

which means the table is most likely completly copied
in a temp file and depending on the table size this
takes time - you killed the alter table i guess



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Re: Lost connection to MySQL server - need help.

2013-10-12 Thread Chris McKeever
We had a similar issue a bit back - and although it sounds similar - based
on your followups it probably isnt, but will just toss this out there
anyhows.  We were experiencing connection timeouts when load would ramp up.
 Doing some digging we learned that our firewall between the servers
bandwidth would get consumed by a large wordpress load - and this in
essence backed up the rest of the requests until they timed out.

We fixed that load issue which reduced the data passing through and have
expereinced a significant performance boost in our app let alone reduction
of these timeout issues




On Sat, Oct 12, 2013 at 12:56 PM, Reindl Harald h.rei...@thelounge.netwrote:



 Am 12.10.2013 19:45, schrieb Jørn Dahl-Stamnes:
  On Saturday 12 October 2013 17:36, Reindl Harald wrote:
  so someone did optimize table on a large table
  you do yourself not a favour restarting the server in such a moment
 
  7 hours before the server was shut down, we did a alter table to add a
 primary
  key to a table that is read-only from the web application.

 which means the table is most likely completly copied
 in a temp file and depending on the table size this
 takes time - you killed the alter table i guess




Re: Lost connection to MySQL server - need help.

2013-10-12 Thread Reindl Harald
sounds like a scheduler issue

did you try deadline?
http://en.wikipedia.org/wiki/Deadline_scheduler

on Linux systems pass elevator=deadline as kernel param

Am 12.10.2013 20:58, schrieb Chris McKeever:
 We had a similar issue a bit back - and although it sounds similar - based
 on your followups it probably isnt, but will just toss this out there
 anyhows.  We were experiencing connection timeouts when load would ramp up.
  Doing some digging we learned that our firewall between the servers
 bandwidth would get consumed by a large wordpress load - and this in
 essence backed up the rest of the requests until they timed out.
 
 We fixed that load issue which reduced the data passing through and have
 expereinced a significant performance boost in our app let alone reduction
 of these timeout issues
 
 On Sat, Oct 12, 2013 at 12:56 PM, Reindl Harald h.rei...@thelounge.netwrote:
 


 Am 12.10.2013 19:45, schrieb Jørn Dahl-Stamnes:
 On Saturday 12 October 2013 17:36, Reindl Harald wrote:
 so someone did optimize table on a large table
 you do yourself not a favour restarting the server in such a moment

 7 hours before the server was shut down, we did a alter table to add a
 primary
 key to a table that is read-only from the web application.

 which means the table is most likely completly copied
 in a temp file and depending on the table size this
 takes time - you killed the alter table i guess




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Re: Exporting to CSV. Error Code: 2013. Lost connection to MySQL server during query

2012-08-01 Thread Fred G
Hi Monty,

First of all, thanks so much for responding to my question! I am using
MySQLworkbench 5.2.37CE.  I'm pretty sure the issue has to do with
something on the administrator side of things. We managed to get it so that
I can click the icon to export the file, but he's still working on getting
it so that we can write an sql query to do this. So for all practical
purposes on my end, the question is being resolved.

But I don't understand how clicking the icon after running a select query
works for exporting, but the command to outfile in a sql query would not
work.

Thanks again

On Tue, Jul 31, 2012 at 5:36 AM, Michael Widenius mo...@askmonty.orgwrote:


 Hi!

  Fred == Fred G Fred writes:

 Fred Thanks Dhaval.  Putting the join condition before INTO outfile
 doesn't seem
 Fred to work, either.

 Fred When I try to use the same outfile name 'test123.csv' I get Error
 Code:
 Fred 1086 File 'test123.csv' already exists.  But then when I try to find
 the
 Fred csv file on my computer, there is a folder with that name, but weird
 files
 Fred in it, none of which are a csv-- and certainly not in the location
 that I
 Fred thought it would be (the same directory that the .sql query is in).

 It's the mysqld server that is writing the .csv file. This means that
 the path is related to the mysql data directory and not to where your
 .sql file is.

 When using select into outfile it's always best to give a full path!


 Fred  Additionally, when I try to identify a different path, such as
 'C:\\' etc,
 Fred I get an error.  This error is: Error Code: 1. Can't create/write to
 file
 Fred C:\test123.csv(Errocde: 2).

 This probably means that you don't have write access to C:\


 Fred I tried running the query outputting to a different named .csv file,
 but it
 Fred is still just running... and seems like it was like yesterday
 where after
 Fred 10 minutes I will get the Error that the MySQL connection was lost.

 The reason that your connection is lost are ether:
 - There is timeout in the client you are using
   (The server never gives a timeout for running queries).
 - The mysqld server died (not likely but possible).
 - Some process in your system is killing quries that runs too long.

 One way to quickly check that things are working are by adding LIMIT 1
 to the query.

 Fred Does anyone have an idea of what is going on?

  The query without exporting the file works fine, in about 12 sec/77
 sec.
  I
  read online how to export MySQL queries into csv's, and I'm not sure
 what
  I
  am doing wrong.  I keep getting the error:
  Error Code: 2013.  Lost connection to MySQL server during query, where
 the
  duration/fetch values are 600.547 sec (~10 minutes).

 What is the exact error message?
 Which client are you using to do the query?

 It's strange that the query works fine when you are not using select
 into outfile.

 What MySQL version are you using

 Regards,
 Monty
 Creator of MySQL and MariaDB



Re: Exporting to CSV. Error Code: 2013. Lost connection to MySQL server during query

2012-07-31 Thread Michael Widenius

Hi!

 Fred == Fred G Fred writes:

Fred Thanks Dhaval.  Putting the join condition before INTO outfile doesn't 
seem
Fred to work, either.

Fred When I try to use the same outfile name 'test123.csv' I get Error Code:
Fred 1086 File 'test123.csv' already exists.  But then when I try to find the
Fred csv file on my computer, there is a folder with that name, but weird files
Fred in it, none of which are a csv-- and certainly not in the location that I
Fred thought it would be (the same directory that the .sql query is in).

It's the mysqld server that is writing the .csv file. This means that
the path is related to the mysql data directory and not to where your
.sql file is.

When using select into outfile it's always best to give a full path!


Fred  Additionally, when I try to identify a different path, such as 'C:\\' 
etc,
Fred I get an error.  This error is: Error Code: 1. Can't create/write to file
Fred C:\test123.csv(Errocde: 2).

This probably means that you don't have write access to C:\


Fred I tried running the query outputting to a different named .csv file, but 
it
Fred is still just running... and seems like it was like yesterday where 
after
Fred 10 minutes I will get the Error that the MySQL connection was lost.

The reason that your connection is lost are ether:
- There is timeout in the client you are using
  (The server never gives a timeout for running queries).
- The mysqld server died (not likely but possible).
- Some process in your system is killing quries that runs too long.

One way to quickly check that things are working are by adding LIMIT 1
to the query.

Fred Does anyone have an idea of what is going on?

 The query without exporting the file works fine, in about 12 sec/77 sec.
 I
 read online how to export MySQL queries into csv's, and I'm not sure what
 I
 am doing wrong.  I keep getting the error:
 Error Code: 2013.  Lost connection to MySQL server during query, where the
 duration/fetch values are 600.547 sec (~10 minutes).

What is the exact error message?
Which client are you using to do the query?

It's strange that the query works fine when you are not using select
into outfile.

What MySQL version are you using

Regards,
Monty
Creator of MySQL and MariaDB

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Re: Exporting to CSV. Error Code: 2013. Lost connection to MySQL server during query

2012-07-26 Thread Fred G
Thanks Dhaval.  Putting the join condition before INTO outfile doesn't seem
to work, either.

When I try to use the same outfile name 'test123.csv' I get Error Code:
1086 File 'test123.csv' already exists.  But then when I try to find the
csv file on my computer, there is a folder with that name, but weird files
in it, none of which are a csv-- and certainly not in the location that I
thought it would be (the same directory that the .sql query is in).
 Additionally, when I try to identify a different path, such as 'C:\\' etc,
I get an error.  This error is: Error Code: 1. Can't create/write to file
C:\test123.csv(Errocde: 2).

I tried running the query outputting to a different named .csv file, but it
is still just running... and seems like it was like yesterday where after
10 minutes I will get the Error that the MySQL connection was lost.

Does anyone have an idea of what is going on?

On Wed, Jul 25, 2012 at 9:22 PM, Dhaval Jaiswal dhaval.jais...@via.comwrote:

 SELECT * FROM test INTO OUTFILE '/home/test.csv' FIELDS TERMINATED BY ','
 ENCLOSED BY '' LINES TERMINATED BY '\n'

 as above give your join condition before INTO OUTFILE.



 On Thu, Jul 26, 2012 at 1:32 AM, Fred G bayespoker...@gmail.com wrote:

 Hi--

 I'm trying to do the following:
 SELECT db.emp.emp_fname, db.emp.emp_fname, db.sale.sale_date,
 db.sale.sale_no, db.sale.sale_total_amt
 into outfile 'test123.csv'
 FIELDS terminated by ','
 FROM db.emp
 LEFT OUTER JOIN db.sale
 ON db.sale.emp_id = db.emp.emp_id;

 The query without exporting the file works fine, in about 12 sec/77 sec.
  I
 read online how to export MySQL queries into csv's, and I'm not sure what
 I
 am doing wrong.  I keep getting the error:
 Error Code: 2013.  Lost connection to MySQL server during query, where the
 duration/fetch values are 600.547 sec (~10 minutes).

 I'm wondering:
 a) What is going on?
 b) How do I fix it?

 Thanks so much!!




 --

 [image: Inline image 2] http://www.via.com/

 *Dhaval* | Database  System

 *E:* dhaval.jais...@via.com ra...@via.com| *T:* 080 4043 3000 | *M:* +91
 - 8095 397 843

 [image: all-icon.jpg] http://www.via.com/




Re: Exporting to CSV. Error Code: 2013. Lost connection to MySQL server during query

2012-07-26 Thread hsv
 2012/07/26 06:52 +0530, Dhaval Jaiswal 
SELECT * FROM test INTO OUTFILE '/home/test.csv' FIELDS TERMINATED BY ',' 
ENCLOSED BY '' LINES TERMINATED BY '\n'

as above give your join condition before INTO OUTFILE.

Right: MySQL server writes into some directory where it is, not where MySQL 
client is. If less than a full path name is given, almost certainly the server 
will attempt to write into a directory to which it has no permission, and 
almost certainly also not into one that you want it to write into. If server 
and client run on separate machines with separate disks, there is no means 
through OUTFILE of there setting the output where the client is, only through 
client s standard output, where you get no choice of field separator, line 
separator, or field-quote character (there is none), although you can keep or 
skip the column names (-N for skipping them), and suppress the one-character 
escape character (-r), same as FIELDS ESCAPED BY ''. There is no means of 
skipping NULL or \N for nulls, which is not CSV format.

And if your MySQL is under Windows, be sure to read all instructions about 
entering full pathnames. It is best to avoid the backslash (\), because that is 
a C-escape introduced (along with much other C-stuff) into SQL s original PL1.


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Re: Exporting to CSV. Error Code: 2013. Lost connection to MySQL server during query

2012-07-26 Thread Fred G
Thanks!

On Thu, Jul 26, 2012 at 12:05 AM, h...@tbbs.net wrote:

  2012/07/26 06:52 +0530, Dhaval Jaiswal 
 SELECT * FROM test INTO OUTFILE '/home/test.csv' FIELDS TERMINATED BY ','
 ENCLOSED BY '' LINES TERMINATED BY '\n'

 as above give your join condition before INTO OUTFILE.
 
 Right: MySQL server writes into some directory where it is, not where
 MySQL client is. If less than a full path name is given, almost certainly
 the server will attempt to write into a directory to which it has no
 permission, and almost certainly also not into one that you want it to
 write into. If server and client run on separate machines with separate
 disks, there is no means through OUTFILE of there setting the output where
 the client is, only through client s standard output, where you get no
 choice of field separator, line separator, or field-quote character (there
 is none), although you can keep or skip the column names (-N for skipping
 them), and suppress the one-character escape character (-r), same as FIELDS
 ESCAPED BY ''. There is no means of skipping NULL or \N for nulls,
 which is not CSV format.

 And if your MySQL is under Windows, be sure to read all instructions about
 entering full pathnames. It is best to avoid the backslash (\), because
 that is a C-escape introduced (along with much other C-stuff) into SQL s
 original PL1.


 --
 MySQL General Mailing List
 For list archives: http://lists.mysql.com/mysql
 To unsubscribe:http://lists.mysql.com/mysql




Exporting to CSV. Error Code: 2013. Lost connection to MySQL server during query

2012-07-25 Thread Fred G
Hi--

I'm trying to do the following:
SELECT db.emp.emp_fname, db.emp.emp_fname, db.sale.sale_date,
db.sale.sale_no, db.sale.sale_total_amt
into outfile 'test123.csv'
FIELDS terminated by ','
FROM db.emp
LEFT OUTER JOIN db.sale
ON db.sale.emp_id = db.emp.emp_id;

The query without exporting the file works fine, in about 12 sec/77 sec.  I
read online how to export MySQL queries into csv's, and I'm not sure what I
am doing wrong.  I keep getting the error:
Error Code: 2013.  Lost connection to MySQL server during query, where the
duration/fetch values are 600.547 sec (~10 minutes).

I'm wondering:
a) What is going on?
b) How do I fix it?

Thanks so much!!


Re: Exporting to CSV. Error Code: 2013. Lost connection to MySQL server during query

2012-07-25 Thread Dhaval Jaiswal
SELECT * FROM test INTO OUTFILE '/home/test.csv' FIELDS TERMINATED BY ','
ENCLOSED BY '' LINES TERMINATED BY '\n'

as above give your join condition before INTO OUTFILE.


On Thu, Jul 26, 2012 at 1:32 AM, Fred G bayespoker...@gmail.com wrote:

 Hi--

 I'm trying to do the following:
 SELECT db.emp.emp_fname, db.emp.emp_fname, db.sale.sale_date,
 db.sale.sale_no, db.sale.sale_total_amt
 into outfile 'test123.csv'
 FIELDS terminated by ','
 FROM db.emp
 LEFT OUTER JOIN db.sale
 ON db.sale.emp_id = db.emp.emp_id;

 The query without exporting the file works fine, in about 12 sec/77 sec.  I
 read online how to export MySQL queries into csv's, and I'm not sure what I
 am doing wrong.  I keep getting the error:
 Error Code: 2013.  Lost connection to MySQL server during query, where the
 duration/fetch values are 600.547 sec (~10 minutes).

 I'm wondering:
 a) What is going on?
 b) How do I fix it?

 Thanks so much!!




-- 

[image: Inline image 2] http://www.via.com/

*Dhaval* | Database  System

*E:* dhaval.jais...@via.com ra...@via.com| *T:* 080 4043 3000 | *M:* +91
- 8095 397 843

[image: all-icon.jpg] http://www.via.com/


Re: ERROR 2013 (HY000): Lost connection to MySQL server during query

2012-03-07 Thread Blog Tieng Viet
If you did not work directly on mysql server (login
by mysql command), please try this. 
Using script (PHP, ...) may lose connection, as my experience.

Best

--- On Mon, 3/5/12, Singer X.J. Wang w...@singerwang.com wrote:

 From: Singer X.J. Wang w...@singerwang.com
 Subject: Re: ERROR 2013 (HY000): Lost connection to MySQL server during query
 To: javad bakhshi javadbakh...@yahoo.com
 Cc: mysql@lists.mysql.com mysql@lists.mysql.com
 Date: Monday, March 5, 2012, 10:40 PM
 Checking your firewall settings..
 
 S
 
 
 On Mon, Mar 5, 2012 at 08:39, javad bakhshi javadbakh...@yahoo.com
 wrote:
 
  Hi,
 
  Still have the same problem and changing
 connect_timeout didn't help.
  Any other Ideas? Is there even any solution to this?
 
  Best regards,
  Javad Bakhshi,
 
 
  
   From: mail...@securitylabs.it
 mail...@securitylabs.it
  To: mysql@lists.mysql.com
  Sent: Thursday, March 1, 2012 11:09 AM
  Subject: Re: ERROR 2013 (HY000): Lost connection to
 MySQL server during
  query
 
  Il 01/03/2012 11:03, javad bakhshi ha scritto:
   Hi,
  
   I am trying to load data into my table from a very
 large file but after
  some time I get this error:
  
   ERROR 2013 (HY000): Lost connection to MySQL
 server during query
  
  
   My file size is around 4G and I have 220M lines in
 my file which have to
  be loaded in to my table. I have 10 of these files
 which have to loaded in
  the same table. My MySQL version is 5.1.59, I have
 changed the
  max_allowed_packet to 346030080.
  
   any ideas how I can solve this problem?
     Best regards,
   Javad Bakhshi,
  In order to resolve the problem you may need to
 increase these two values
  in mysql.ini or my.cnf, and restart mysql:
 
  wait_timeout = 28800
  connect_timeout = 28800
 
  -- MySQL General Mailing List
  For list archives: http://lists.mysql.com/mysql
  To unsubscribe:    http://lists.mysql.com/mysql
 
 
 -- 
 --
 Pythian proud winner of Oracle North America Titan Award for
 Exadata 
 Solution...watch the video on pythian.com


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To unsubscribe:http://lists.mysql.com/mysql



Re: ERROR 2013 (HY000): Lost connection to MySQL server during query

2012-03-05 Thread javad bakhshi
Hi,

Still have the same problem and changing connect_timeout didn't help. 
Any other Ideas? Is there even any solution to this?
 
Best regards,
Javad Bakhshi,



 From: mail...@securitylabs.it mail...@securitylabs.it
To: mysql@lists.mysql.com 
Sent: Thursday, March 1, 2012 11:09 AM
Subject: Re: ERROR 2013 (HY000): Lost connection to MySQL server during query
 
Il 01/03/2012 11:03, javad bakhshi ha scritto:
 Hi,
 
 I am trying to load data into my table from a very large file but after some 
 time I get this error:
 
 ERROR 2013 (HY000): Lost connection to MySQL server during query
 
 
 My file size is around 4G and I have 220M lines in my file which have to be 
 loaded in to my table. I have 10 of these files which have to loaded in the 
 same table. My MySQL version is 5.1.59, I have changed the  
 max_allowed_packet to 346030080.
 
 any ideas how I can solve this problem?
   Best regards,
 Javad Bakhshi,
In order to resolve the problem you may need to increase these two values in 
mysql.ini or my.cnf, and restart mysql:

wait_timeout = 28800
connect_timeout = 28800

-- MySQL General Mailing List
For list archives: http://lists.mysql.com/mysql
To unsubscribe:    http://lists.mysql.com/mysql

Re: ERROR 2013 (HY000): Lost connection to MySQL server during query

2012-03-05 Thread Singer X.J. Wang
Checking your firewall settings..

S


On Mon, Mar 5, 2012 at 08:39, javad bakhshi javadbakh...@yahoo.com wrote:

 Hi,

 Still have the same problem and changing connect_timeout didn't help.
 Any other Ideas? Is there even any solution to this?

 Best regards,
 Javad Bakhshi,


 
  From: mail...@securitylabs.it mail...@securitylabs.it
 To: mysql@lists.mysql.com
 Sent: Thursday, March 1, 2012 11:09 AM
 Subject: Re: ERROR 2013 (HY000): Lost connection to MySQL server during
 query

 Il 01/03/2012 11:03, javad bakhshi ha scritto:
  Hi,
 
  I am trying to load data into my table from a very large file but after
 some time I get this error:
 
  ERROR 2013 (HY000): Lost connection to MySQL server during query
 
 
  My file size is around 4G and I have 220M lines in my file which have to
 be loaded in to my table. I have 10 of these files which have to loaded in
 the same table. My MySQL version is 5.1.59, I have changed the
 max_allowed_packet to 346030080.
 
  any ideas how I can solve this problem?
Best regards,
  Javad Bakhshi,
 In order to resolve the problem you may need to increase these two values
 in mysql.ini or my.cnf, and restart mysql:

 wait_timeout = 28800
 connect_timeout = 28800

 -- MySQL General Mailing List
 For list archives: http://lists.mysql.com/mysql
 To unsubscribe:http://lists.mysql.com/mysql


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--
Pythian proud winner of Oracle North America Titan Award for Exadata 
Solution...watch the video on pythian.com


ERROR 2013 (HY000): Lost connection to MySQL server during query

2012-03-01 Thread javad bakhshi
Hi,

I am trying to load data into my table from a very large file but after some 
time I get this error:

ERROR 2013 (HY000): Lost connection to MySQL server during query


My file size is around 4G and I have 220M lines in my file which have to be 
loaded in to my table. 
I have 10 of these files which have to loaded in the same table. 
My MySQL version is 5.1.59, I have changed the  max_allowed_packet to 346030080.

any ideas how I can solve this problem?
 
Best regards,
Javad Bakhshi,

Re: ERROR 2013 (HY000): Lost connection to MySQL server during query

2012-03-01 Thread mail...@securitylabs.it

Il 01/03/2012 11:03, javad bakhshi ha scritto:

Hi,

I am trying to load data into my table from a very large file but after some 
time I get this error:

ERROR 2013 (HY000): Lost connection to MySQL server during query


My file size is around 4G and I have 220M lines in my file which have to be loaded in to my table. 
I have 10 of these files which have to loaded in the same table. 
My MySQL version is 5.1.59, I have changed the  max_allowed_packet to 346030080.


any ideas how I can solve this problem?
  
Best regards,

Javad Bakhshi,
In order to resolve the problem you may need to increase these two 
values in mysql.ini or my.cnf, and restart mysql:


wait_timeout = 28800
connect_timeout = 28800

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Update table on lost connection

2011-09-28 Thread Alex Schaft

Hi,

We're busy moving legacy apps from foxpro tables to mysql. User logins 
were tracked via a record in a table which the app then locked, 
preventing multiple logins for the same user code.


I want to simulate this via a locked column in a mysql table, but 
would need the field to be cleared if the server loses the connection to 
the client. How would I do this, or is there an alternative?


Thanks,
Alex



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Re: Update table on lost connection

2011-09-28 Thread Hank
Check out the GET_LOCK and RELEASE_LOCK virtual lock functions in MySQL.

-Hank



On Wed, Sep 28, 2011 at 9:15 AM, Alex Schaft al...@quicksoftware.co.za wrote:
 Hi,

 We're busy moving legacy apps from foxpro tables to mysql. User logins were
 tracked via a record in a table which the app then locked, preventing
 multiple logins for the same user code.

 I want to simulate this via a locked column in a mysql table, but would
 need the field to be cleared if the server loses the connection to the
 client. How would I do this, or is there an alternative?

 Thanks,
 Alex




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Re: Lost connection to MySQL server during query

2009-09-09 Thread Claudio Nanni
Can you provide more details?
network layout, type of client/app used, connectors,etc,etc?
Thanks

Claudio


2009/9/9 stutiredboy stutired...@gmail.com

 hi,all:

 we met a problem that:

 * Lost connection to MySQL server during query
 SHOW TABLE STATUS WHERE ENGINE='MyISAM'

 *sometimes it works well, sometimes not

 our mysql version is 5.0.84

 our system is FreeBSD 6.2

 thanks

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Re: Lost connection to MySQL server during query

2009-09-09 Thread Claudio Nanni
Since it is very unlikely that you lose connection on the socket file,
I guess you are using a PHP app, that uses the mysql driver and the problem
must be in the driver.
I would not look at mysql but at the PHP and PHP2MYSQL layer, mainly at the
later one.

Try different PHP (and driver) versions.


Claudio


2009/9/9 stutiredboy stutired...@gmail.com

 the application program and mysql server are in the same host
 and i have add skip-name-resolv to the my.cnf and
 extend the max_allowed_packet from 16M to 32M

 our application connected to mysql server from mysql.sock

 before the query which cause lost connection to MySQLserver..
 we only ran some sql that create table(s)

 i have read this article
 http://dev.mysql.com/doc/refman/5.1/en/gone-away.html
 and can get rid of the problems this article referred

 it seems that our problem is similar to this bug:
 http://lists.mysql.com/commits/9447
 http://bugs.mysql.com/bug.php?id=15752

 but, this bug has been fixed in 5.0.25

 are there any suggestions ? or any other informaion (s) should i post here?

 thanks!

 stutiredboy


 Claudio Nanni wrote:

 Can you provide more details?
 network layout, type of client/app used, connectors,etc,etc?
 Thanks

 Claudio


 2009/9/9 stutiredboy stutired...@gmail.com mailto:stutired...@gmail.com
 

hi,all:

we met a problem that:

* Lost connection to MySQL server during query
SHOW TABLE STATUS WHERE ENGINE='MyISAM'

*sometimes it works well, sometimes not

our mysql version is 5.0.84

our system is FreeBSD 6.2

thanks

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Re: Lost connection to MySQL server during query

2009-09-09 Thread stutiredboy

the application program and mysql server are in the same host
and i have add skip-name-resolv to the my.cnf and
extend the max_allowed_packet from 16M to 32M

our application connected to mysql server from mysql.sock

before the query which cause lost connection to MySQLserver..
we only ran some sql that create table(s)

i have read this article 
http://dev.mysql.com/doc/refman/5.1/en/gone-away.html

and can get rid of the problems this article referred

it seems that our problem is similar to this bug:
http://lists.mysql.com/commits/9447
http://bugs.mysql.com/bug.php?id=15752

but, this bug has been fixed in 5.0.25

are there any suggestions ? or any other informaion (s) should i post here?

thanks!

stutiredboy


Claudio Nanni wrote:

Can you provide more details?
network layout, type of client/app used, connectors,etc,etc?
Thanks

Claudio


2009/9/9 stutiredboy stutired...@gmail.com 
mailto:stutired...@gmail.com


hi,all:

we met a problem that:

* Lost connection to MySQL server during query
SHOW TABLE STATUS WHERE ENGINE='MyISAM'

*sometimes it works well, sometimes not

our mysql version is 5.0.84

our system is FreeBSD 6.2

thanks

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Lost connection to MySQL server during query

2009-09-08 Thread stutiredboy
hi,all:

we met a problem that:

* Lost connection to MySQL server during query
SHOW TABLE STATUS WHERE ENGINE='MyISAM'

*sometimes it works well, sometimes not

our mysql version is 5.0.84

our system is FreeBSD 6.2

thanks

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Re: mysql error 2013 Lost connection to MySQL server during query

2009-06-02 Thread Per Jessen
Per Jessen wrote:

 It happened agaIn this morning, but slightly different:
 
 [snip]
 thd=0x7fe0140c7e00
 Attempting backtrace. You can use the following information to find
 out where mysqld died. If you see no messages after this, something
 went terribly wrong...
 Cannot determine thread, fp=0xb, backtrace may not be correct.
 Bogus stack limit or frame pointer, fp=0xb, stack_bottom=0x4514,
 thread_stack=262144, aborting backtrace.
 Trying to get some variables.
 Some pointers may be invalid and cause the dump to abort...
 thd-query at 0x1355140 = INSERT IGNORE INTO quarantine_archive SELECT
 * FROM quarantine WHERE state=1 AND domain='example.com'
 thd-thread_id=1493537
 
 The context is the same as previously, except the query:
 
 INSERT IGNORE INTO quarantine_archive SELECT * FROM quarantine WHERE
 state=1 AND domain='example.com'

This is not exactly reproducable, but it is fairly predictable - happens
every morning towards 0600 - I have an archive job starting at 0500. 
For the last three days, the query has been roughly the same, except
the 'example.com' varies.  

 Is there nothing I can do to attempt to diagnose crashes such as this?

Still no suggestions? 


/Per Jessen, Zürich


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Re: mysql error 2013 Lost connection to MySQL server during query

2009-05-27 Thread Per Jessen
Per Jessen wrote:

 I have just discovered that my mysql server was restarted this
 morning, which is what gave me the 2013.  In the log I found this:

[snip]

It happened agaIn this morning, but slightly different:

[snip]
thd=0x7fe0140c7e00
Attempting backtrace. You can use the following information to find out
where mysqld died. If you see no messages after this, something went
terribly wrong...
Cannot determine thread, fp=0xb, backtrace may not be correct.
Bogus stack limit or frame pointer, fp=0xb, stack_bottom=0x4514,
thread_stack=262144, aborting backtrace.
Trying to get some variables.
Some pointers may be invalid and cause the dump to abort...
thd-query at 0x1355140 = INSERT IGNORE INTO quarantine_archive SELECT *
FROM quarantine WHERE state=1 AND domain='example.com'
thd-thread_id=1493537

The context is the same as previously, except the query: 

INSERT IGNORE INTO quarantine_archive SELECT * FROM quarantine WHERE
state=1 AND domain='example.com'

It's getting to be a bit annoying - not all our apps were written to be
able to handle the database connection disappearing at any time.  Yes,
they should have been, but it is a pretty unusual situation after all. 

Is there nothing I can do to attempt to diagnose crashes such as this?  


/Per Jessen, Zürich


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mysql error 2013 Lost connection to MySQL server during query

2009-05-25 Thread Per Jessen
This weekend we completed migrating a large(ish) mysql server from
5.0.26 on 32bit to 5.0.51a on 64bit.  Everything went relatively
smoothly, until this morning when I noticed an application had choked
on getting Error 2013 Lost connection to MySQL server during query.
The application is running remotely on 32bit using mysql library from
version 5.0.67.

I've been googling quite a bit, but haven't really found anything of any
use.  I've checked the two configurations, and they are the same. Can
anyone help point me in the right direction? Thanks.


/Per Jessen, Zürich


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Re: mysql error 2013 Lost connection to MySQL server during query

2009-05-25 Thread Per Jessen
Per Jessen wrote:

 This weekend we completed migrating a large(ish) mysql server from
 5.0.26 on 32bit to 5.0.51a on 64bit.  Everything went relatively
 smoothly, until this morning when I noticed an application had choked
 on getting Error 2013 Lost connection to MySQL server during query.

I have just discovered that my mysql server was restarted this morning,
which is what gave me the 2013.  In the log I found this:

090525  6:04:35 - mysqld got signal 11;
This could be because you hit a bug. It is also possible that this
binary or one of the libraries it was linked against is corrupt,
improperly built, or misconfigured. This error can also be caused by
malfunctioning hardware. We will try our best to scrape up some info
that will hopefully help diagnose the problem, but since we have
already crashed, something is definitely wrong and this may fail.

key_buffer_size=6442450944
read_buffer_size=258048
max_used_connections=43
max_connections=100
threads_connected=26
It is possible that mysqld could use up to
key_buffer_size + (read_buffer_size + sort_buffer_size)*max_connections
= 6367855 Kbytes of memory
Hope that's ok; if not, decrease some variables in the equation.

thd=0x7fa6fc0173e0
Attempting backtrace. You can use the following information to find out
where mysqld died. If you see no messages after this, something went
terribly wrong...
Cannot determine thread, fp=0xb, backtrace may not be correct.
Bogus stack limit or frame pointer, fp=0xb, stack_bottom=0x41a6,
thread_stack=262144, aborting backtrace.
Trying to get some variables.
Some pointers may be invalid and cause the dump to abort...
thd-query at 0x1340aa0 = SELECT domain,domain FROM
dodgy_domain,spamdns_ipaddr WHERE
dodgy_domain.ipaddr=spamdns_ipaddr.ipaddr group by domain having
min(first)='2009-05-25 00:00:00'
thd-thread_id=434983


/Per Jessen, Zürich


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Re: mysql error 2013 Lost connection to MySQL server during query

2009-05-25 Thread Per Jessen

Michael Dykman wrote:


It might be helpful if you could tell us how you affected your data
migration 


Sorry, I'm not familiar with reporting problems in/on mysql.

The data migration was done with a full database dump (mysqldump) from 
the 32bit system, then a reload on the new 64bit system.  I think it 
took 6-8 hours.


 and what kind of job was running at the time it went down.

The job executing the SQL mentioned in the log ran on another server. It 
is a SELECT running from the command line (in a Makefile). I'm not sure 
what else to tell you.



Having the server go away mid-query generally does mean you have run
into a bug of some sort but, more often than not, you were doing
something ill-advised at the time.


The setup has been running for at least two years with no such problems.

Let me know what other info would be interesting.


best regards
Per Jessen

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Re: mysql error 2013 Lost connection to MySQL server during query

2009-05-25 Thread Michael Steinfeld
just a thought: Did you run mysql_upgrade after the import?

On Mon, May 25, 2009 at 10:19 AM, Per Jessen p...@computer.org wrote:
 Michael Dykman wrote:

 It might be helpful if you could tell us how you affected your data
 migration

 Sorry, I'm not familiar with reporting problems in/on mysql.

 The data migration was done with a full database dump (mysqldump) from the
 32bit system, then a reload on the new 64bit system.  I think it took 6-8
 hours.

 and what kind of job was running at the time it went down.

 The job executing the SQL mentioned in the log ran on another server. It is
 a SELECT running from the command line (in a Makefile). I'm not sure what
 else to tell you.

 Having the server go away mid-query generally does mean you have run
 into a bug of some sort but, more often than not, you were doing
 something ill-advised at the time.

 The setup has been running for at least two years with no such problems.

 Let me know what other info would be interesting.


 best regards
 Per Jessen

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Re: mysql error 2013 Lost connection to MySQL server during query

2009-05-25 Thread Per Jessen
Michael Steinfeld wrote:

 just a thought: Did you run mysql_upgrade after the import?
 

No, I didn't - I didn't think of it as I really only moved the data
across.  


best regards
Per Jessen, Zürich


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Re: mysql error 2013 Lost connection to MySQL server during query

2009-05-25 Thread Per Jessen
Per Jessen wrote:

 Michael Steinfeld wrote:
 
 just a thought: Did you run mysql_upgrade after the import?
 
 
 No, I didn't - I didn't think of it as I really only moved the data
 across.
 

Okay, have done a mysqlcheck --check-upgrade - came back all clean.  I
don't see a need to run mysql_fix_privilege as I manually copied the
necessary privilege data.


/Per Jessen, Zürich


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Re: mysql error 2013 Lost connection to MySQL server during query

2009-05-25 Thread Michael Dykman
Have you tried running the offending SQL manually against you new
installation?  Does it come back clean in the isolated case?  Is there
anything else which runs against this database at night?  crons?
Could you post the script that you are running to give some context to
the statement which winds up in your error log?

Considering that you did use mysqldump to manually inject your data,
cross-version incompatibilities are pretty much out of the question.

 - michael

On Mon, May 25, 2009 at 11:19 AM, Per Jessen p...@computer.org wrote:
 Per Jessen wrote:

 Michael Steinfeld wrote:

 just a thought: Did you run mysql_upgrade after the import?


 No, I didn't - I didn't think of it as I really only moved the data
 across.


 Okay, have done a mysqlcheck --check-upgrade - came back all clean.  I
 don't see a need to run mysql_fix_privilege as I manually copied the
 necessary privilege data.


 /Per Jessen, Zürich


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Re: mysql error 2013 Lost connection to MySQL server during query

2009-05-25 Thread Michael Steinfeld
On Mon, May 25, 2009 at 11:19 AM, Per Jessen p...@computer.org wrote:
 Per Jessen wrote:

 Michael Steinfeld wrote:

 just a thought: Did you run mysql_upgrade after the import?


 No, I didn't - I didn't think of it as I really only moved the data
 across.



I suspect that will solve your issue. Keep me posted.

 Okay, have done a mysqlcheck --check-upgrade - came back all clean.  I
 don't see a need to run mysql_fix_privilege as I manually copied the
 necessary privilege data.


 /Per Jessen, Zürich


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Re: mysql error 2013 Lost connection to MySQL server during query

2009-05-25 Thread Per Jessen
Michael Dykman wrote:

 Have you tried running the offending SQL manually against you new
 installation?  Does it come back clean in the isolated case? 

No, not manually, but the job/the SQL is run several times a day, maybe
2-3 times per hour.  

 Is there anything else which runs against this database at night? 
 crons? 

Yes, lots of stuff.  Cron-jobs, jobs submitted by daemons, etc.

 Could you post the script that you are running to give some context to
 the statement which winds up in your error log?

I'm generating a zonefile for rbldnsd with entries from my table since
midnight.  Entries from before midnight are put in a main-table,
entries after are in this regular diff.

The statement is this:

SELECT domain,domain FROM dodgy_domain,spamdns_ipaddr WHERE
dodgy_domain.ipaddr=spamdns_ipaddr.ipaddr group by domain having
min(first)='midnight'

Tonight it will be changed to:  (single domain, not domain,domain)

SELECT domain FROM dodgy_domain,spamdns_ipaddr WHERE
dodgy_domain.ipaddr=spamdns_ipaddr.ipaddr group by domain having
min(first)='midnight'


Additional context: The server is brandnew, an HP Proliant with dual
quad-core Xeons and 10Gb RAM.  The filesystem is JFS on hardware RAID6. 


/Per Jessen, Zürich


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Re: mysql error 2013 Lost connection to MySQL server during query

2009-05-25 Thread Per Jessen
Per Jessen wrote:

 Michael Dykman wrote:
 
 Have you tried running the offending SQL manually against you new
 installation?  Does it come back clean in the isolated case?
 
 No, not manually, but the job/the SQL is run several times a day,
 maybe 2-3 times per hour.

I've also just run the query manually a couple of times, no problems.


/Per Jessen, Zürich


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Re: mysql error 2013 Lost connection to MySQL server during query

2009-05-25 Thread Michael Dykman
Given the new hardware, I'm now suspecting the RAID controller. I have
seen misconfigured RAIDs or bad RAID drivers take out a server in just
such a manner.  I had a debian server connected to an EMC SAN..  As
debian isn't supported, we had this open-source driver which gave us
no end of problems.

If a logical drive acts up or does something unexpected, MySQL could
react to that in a manner consistent with what you are seeing in your
log.

I would be tempted to put the hardware through a stress test.  I know
that's not much help.

 - michael

On Mon, May 25, 2009 at 12:02 PM, Per Jessen p...@computer.org wrote:
 Per Jessen wrote:

 Michael Dykman wrote:

 Have you tried running the offending SQL manually against you new
 installation?  Does it come back clean in the isolated case?

 No, not manually, but the job/the SQL is run several times a day,
 maybe 2-3 times per hour.

 I've also just run the query manually a couple of times, no problems.


 /Per Jessen, Zürich


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Re: mysql error 2013 Lost connection to MySQL server during query

2009-05-25 Thread Per Jessen
Michael Dykman wrote:

 Given the new hardware, I'm now suspecting the RAID controller. I have
 seen misconfigured RAIDs or bad RAID drivers take out a server in just
 such a manner.  I had a debian server connected to an EMC SAN..  As
 debian isn't supported, we had this open-source driver which gave us
 no end of problems.
 
 If a logical drive acts up or does something unexpected, MySQL could
 react to that in a manner consistent with what you are seeing in your
 log.

Shouldn't/wouldn't the filesystem complain first?  There is a lot of
activity on the filesystem, mysql is just a tiny part of it. 

 I would be tempted to put the hardware through a stress test.  I know
 that's not much help.

I really have no reason to suspect the hardware.  It's new, but it's
been running in burn-in mode for about a month (although not with
much load, mostly idling).  I might as well suspect the mysql build and
try upgrading to a newer one. 


/Per Jessen, Zürich


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Re: mysql error 2013 Lost connection to MySQL server during query

2009-05-25 Thread Michael Dykman
The issues that we saw only came to light under stress.  The
application I am referring to ran under a fair bit of load at the best
of times but it was during sustained spikes that the flaws in our
driver made themselves apparent.

Mind you, we weren't using JFS, so I'm not sure how that would have reacted.

 - michael

On Mon, May 25, 2009 at 12:19 PM, Per Jessen p...@computer.org wrote:
 Michael Dykman wrote:

 Given the new hardware, I'm now suspecting the RAID controller. I have
 seen misconfigured RAIDs or bad RAID drivers take out a server in just
 such a manner.  I had a debian server connected to an EMC SAN..  As
 debian isn't supported, we had this open-source driver which gave us
 no end of problems.

 If a logical drive acts up or does something unexpected, MySQL could
 react to that in a manner consistent with what you are seeing in your
 log.

 Shouldn't/wouldn't the filesystem complain first?  There is a lot of
 activity on the filesystem, mysql is just a tiny part of it.

 I would be tempted to put the hardware through a stress test.  I know
 that's not much help.

 I really have no reason to suspect the hardware.  It's new, but it's
 been running in burn-in mode for about a month (although not with
 much load, mostly idling).  I might as well suspect the mysql build and
 try upgrading to a newer one.


 /Per Jessen, Zürich


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Re: mysql error 2013 Lost connection to MySQL server during query

2009-05-25 Thread Darryle Steplight
Hi Per,

Maybe you need to beef up your CONNECT_TIMEOUT setting in your .my.cnf
file. Are these queries appearing in your slow query logs?What is your
LOG_QUERY_TIMES set too?

Here are some other settings you may want to play around wtih
CONNECT_TIMEOUT
INTERACTIVE_TIMEOUT
WAIT_TIMEOUT
NET_WRITE_TIMEOUT
NET_READ_TIMEOUT
MAX_CONNECT_ERRORS

On Mon, May 25, 2009 at 3:06 AM, Per Jessen p...@computer.org wrote:
 This weekend we completed migrating a large(ish) mysql server from
 5.0.26 on 32bit to 5.0.51a on 64bit.  Everything went relatively
 smoothly, until this morning when I noticed an application had choked
 on getting Error 2013 Lost connection to MySQL server during query.
 The application is running remotely on 32bit using mysql library from
 version 5.0.67.

 I've been googling quite a bit, but haven't really found anything of any
 use.  I've checked the two configurations, and they are the same. Can
 anyone help point me in the right direction? Thanks.


 /Per Jessen, Zürich


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Re: mysql error 2013 Lost connection to MySQL server during query

2009-05-25 Thread Per Jessen
Darryle Steplight wrote:

 Hi Per,
 
 Maybe you need to beef up your CONNECT_TIMEOUT setting in your .my.cnf
 file. Are these queries appearing in your slow query logs?What is your
 LOG_QUERY_TIMES set too?
 
 Here are some other settings you may want to play around wtih
 CONNECT_TIMEOUT
 INTERACTIVE_TIMEOUT
 WAIT_TIMEOUT
 NET_WRITE_TIMEOUT
 NET_READ_TIMEOUT
 MAX_CONNECT_ERRORS
 

Hi Darryle

I did notice references to some of those when I was googling, but
because I didn't change any settings in my migration except up the
key_buffer space, I didn't really pay much attention. 


/Per Jessen, Zürich


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? Solved ? Re: mysqldump: Error 2 013: Lost connection to MySQL server

2009-01-13 Thread Dan
On Tue, 2009-01-13 at 12:19 +0530, Chandru wrote:

 Hi,
 
   Did u try using this command 
 
 
 mysqldump --opt db_name  db_name.sql -p 2bkp.err

Not quite. Firstly, I had to alter the normal backup cron job, and that
doesn't happen until late at night.

Secondly, yes I added the redirection to capture errors. There were none
( empty file this time ).

Thirdly, I didn't use '--opt'. I had no other suggestions yesterday
( before I went to bed anyway - there's 1 in my inbox this morning ), so
I did some experimenting of my own and changed the dump command to:

mysqldump --skip-opt --add-drop-table --add-locks --create-options
--quick --lock-tables --set-charset --disable-keys dbmail  dbmail.sql
-pSOME_PASSWORD 2bkp.err

This made mysql do 1 insert per record.

The backup *appears* to have completed successfully. At least the end of
the dump file looks valid. It ends dumping the last table, then a view,
then I get:

-- Dump completed on 2009-01-13 17:23:13

Previously it just finished part-way through dumping a blob.

I have yet to do extensive testing on it. I suppose I should try
importing the dump file into another server and see if I get the correct
number of rows in each table ...

The only issue now is that the dump file is much smaller than I would
have expected. When using --opt, I was getting 30GB dump files. I would
have expected the current format ( 1 insert statement per record ) to be
much bigger, but it's 23GB. Now having said that, I did email the
current DB administrator and ask him to get people to archive all emails
with huge attachments somewhere on a network share ( people have some
pretty big attachments ). Also I asked him to get people to clean out
their Trash ( which happens only when we tell them to ). So I suppose
it's not completely infeasible that this alone is responsible for the
difference.

Anyway, it's been a very disconcerting experience. It goes without
saying that people would expect that anything that gets into a MySQL
database should be able to be backed up by mysqldump. And it's worrying
that the default --opt can't do that. When I get some time I'll enter a
bug ...

Thanks for you help Chandru.

Dan



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Re: ? Solved ? Re: mysqldump: Error 2013: Lost connection to MySQL server

2009-01-13 Thread Andrew Garner
This sounds like you need to raise max_allowed_packet for mysqldump
(and possibly mysqld) - these are separate settings for both the
client and the server.  You can do this via the my.cnf (or ~/.my.cnf)
or specify it as an option on the command line mysqldump --opt ...
--max_allowed_packet=1G dbname  backup-file.

On Tue, Jan 13, 2009 at 2:58 PM, Dan d...@entropy.homelinux.org wrote:
 On Tue, 2009-01-13 at 12:19 +0530, Chandru wrote:

 Hi,

   Did u try using this command


 mysqldump --opt db_name  db_name.sql -p 2bkp.err

 Not quite. Firstly, I had to alter the normal backup cron job, and that
 doesn't happen until late at night.

 Secondly, yes I added the redirection to capture errors. There were none
 ( empty file this time ).

 Thirdly, I didn't use '--opt'. I had no other suggestions yesterday
 ( before I went to bed anyway - there's 1 in my inbox this morning ), so
 I did some experimenting of my own and changed the dump command to:

 mysqldump --skip-opt --add-drop-table --add-locks --create-options
 --quick --lock-tables --set-charset --disable-keys dbmail  dbmail.sql
 -pSOME_PASSWORD 2bkp.err

 This made mysql do 1 insert per record.

 The backup *appears* to have completed successfully. At least the end of
 the dump file looks valid. It ends dumping the last table, then a view,
 then I get:

 -- Dump completed on 2009-01-13 17:23:13

 Previously it just finished part-way through dumping a blob.

 I have yet to do extensive testing on it. I suppose I should try
 importing the dump file into another server and see if I get the correct
 number of rows in each table ...

 The only issue now is that the dump file is much smaller than I would
 have expected. When using --opt, I was getting 30GB dump files. I would
 have expected the current format ( 1 insert statement per record ) to be
 much bigger, but it's 23GB. Now having said that, I did email the
 current DB administrator and ask him to get people to archive all emails
 with huge attachments somewhere on a network share ( people have some
 pretty big attachments ). Also I asked him to get people to clean out
 their Trash ( which happens only when we tell them to ). So I suppose
 it's not completely infeasible that this alone is responsible for the
 difference.

 Anyway, it's been a very disconcerting experience. It goes without
 saying that people would expect that anything that gets into a MySQL
 database should be able to be backed up by mysqldump. And it's worrying
 that the default --opt can't do that. When I get some time I'll enter a
 bug ...

 Thanks for you help Chandru.

 Dan



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Re: ? Solved ? Re: mysqldump: Error 2013: Lost connection to MySQL server

2009-01-13 Thread Dan
On Tue, 13 Jan 2009 18:34:44 -0600, Andrew Garner
andrew.b.gar...@gmail.com wrote:

 This sounds like you need to raise max_allowed_packet for mysqldump
 (and possibly mysqld) - these are separate settings for both the
 client and the server.  You can do this via the my.cnf (or ~/.my.cnf)
 or specify it as an option on the command line mysqldump --opt ...
 --max_allowed_packet=1G dbname  backup-file.

This is certainly the most common advice for this error, yes. I increased
the max_allowed_packet size from 1M to 128M when the problem initially
occured. This didn't fix anything.

Since dbmail splits up all email body / attachments into small chunks and
inserts these chunks in separate records, I really don't see how a
max_allowed_packet size of 128M would fail ... especially since the data
got in there with a max_allowed_packet size of 1M to begin with. The
biggest email in the database is 50M. So even if dbmail *hadn't* split the
email into separate records, a max_allowed_packet size of 128M should be
*easily* big enough, shouldn't it?

As for a max_allowed_packet size of 1G, that just sounds dangerous. The
server has 900MB or so of chip RAM and 512MB of swap. It's also running a
LOT of other services. I don't want something stupid happening like Linux's
out-of-memory-killer coming along and killing MySQL, causing database
corruption. Can someone please comment on this? If it's not dangerous, I
will try it. As noted in a prior post, I 'successfully' completed a backup
last night, and I'm testing it now, but it took 10 hours to complete, and
was still running when people came in this morning, which is obviously not
desirable, so if I can somehow still use the --opt option of mysqldump by
making max_allowed_packet to some absolutely astronomical level without
endangering things, maybe that's the way to go. Maybe ...

Anyway, thanks for the comments Andrew.

Dan


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Re: ? Solved ? Re: mysqldump: Error 2013: Lost connection to MySQL server

2009-01-13 Thread Andrew Garner
On Tue, Jan 13, 2009 at 6:06 PM, Dan d...@entropy.homelinux.org wrote:
 On Tue, 13 Jan 2009 18:34:44 -0600, Andrew Garner
 andrew.b.gar...@gmail.com wrote:

 This sounds like you need to raise max_allowed_packet for mysqldump
 (and possibly mysqld) - these are separate settings for both the
 client and the server.  You can do this via the my.cnf (or ~/.my.cnf)
 or specify it as an option on the command line mysqldump --opt ...
 --max_allowed_packet=1G dbname  backup-file.

 This is certainly the most common advice for this error, yes. I increased
 the max_allowed_packet size from 1M to 128M when the problem initially
 occured. This didn't fix anything.

My apologies.  I hadn't read up-thread where this was discussed, and
given that, max_allowed_packet is almost certainly not the problem.
Sorry for the noise.

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mysqldump: Error 2013: Lost connection to MySQL server

2009-01-12 Thread Daniel Kasak
Hi all. I have a 30GB innodb-only database in mysql-5.0.54. I have
always done nightly backups with:

mysqldump --opt db_name  db_name.sql -p

Recently this started failing with:
Error 2013: Lost connection to MySQL server

I have checked all tables for corruption - nothing found. Also as far as
I can tell there are no issues with clients using the database. There
have been no crashes since I did a full restore. So I assume we can rule
out corruption.

I have searched around for the error message, and found people
discussing the max_allowed_packet option. I've tried increasing the
server's max_allowed_packet to many different values. Currently it's at
128M, which is *way* over the default. I have also used the
--max_allowed_packet option simultaneously with mysqldump. And lastly, I
have been restarting the server after each my.cnf change.

The data was inserted via the 'dbmail' application
( http://www.dbmail.org ), while the server was set up with the default
max_allowed_packet size. DBMail breaks up message into chunks, and
stores these chunks in individual records. I'm not sure what the default
size of these chunks is, but I belive it's a reasonable value anyway.

What next? I *must* get regular backups working again ...

Dan


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Re: mysqldump: Error 2013: Lost connection to MySQL server

2009-01-12 Thread Chandru
Hi,

 please increase your interactive_timeout variable to some big number and
also try to log the erros if any thing by using the command:

mysqldump --opt db_name  db_name.sql -p 2bkp.err

check if you get some thing in the bkp.err file.

Regards,

Chandru,

www.mafiree.com

On Mon, Jan 12, 2009 at 9:07 AM, Daniel Kasak d...@entropy.homelinux.orgwrote:

 Hi all. I have a 30GB innodb-only database in mysql-5.0.54. I have
 always done nightly backups with:

 mysqldump --opt db_name  db_name.sql -p

 Recently this started failing with:
 Error 2013: Lost connection to MySQL server

 I have checked all tables for corruption - nothing found. Also as far as
 I can tell there are no issues with clients using the database. There
 have been no crashes since I did a full restore. So I assume we can rule
 out corruption.

 I have searched around for the error message, and found people
 discussing the max_allowed_packet option. I've tried increasing the
 server's max_allowed_packet to many different values. Currently it's at
 128M, which is *way* over the default. I have also used the
 --max_allowed_packet option simultaneously with mysqldump. And lastly, I
 have been restarting the server after each my.cnf change.

 The data was inserted via the 'dbmail' application
 ( http://www.dbmail.org ), while the server was set up with the default
 max_allowed_packet size. DBMail breaks up message into chunks, and
 stores these chunks in individual records. I'm not sure what the default
 size of these chunks is, but I belive it's a reasonable value anyway.

 What next? I *must* get regular backups working again ...

 Dan


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Re: mysqldump: Error 2013: Lost connection to MySQL server

2009-01-12 Thread Dan
  | | 
| ssl_capath  | | 
| ssl_cert| | 
| ssl_cipher  | | 
| ssl_key | | 
| storage_engine  | MyISAM  | 
| sync_binlog | 0   | 
| sync_frm| ON  |
| system_time_zone| EST | 
| table_cache | 64  | 
| table_lock_wait_timeout | 50  | 
| table_type  | MyISAM  | 
| thread_cache_size   | 0   | 
| thread_stack| 196608  | 
| time_format | %H:%i:%s| 
| time_zone   | SYSTEM  | 
| timed_mutexes   | OFF | 
| tmp_table_size  | 33554432| 
| tmpdir  | /tmp/   | 
| transaction_alloc_block_size| 8192| 
| transaction_prealloc_size   | 4096| 
| tx_isolation| REPEATABLE-READ | 
| updatable_views_with_limit  | YES | 
| version | 5.0.54-log  | 
| version_comment | Gentoo Linux mysql-5.0.54   | 
| version_compile_machine | i686| 
| version_compile_os  | pc-linux-gnu| 
| wait_timeout| 28800   | 
+-+-+

Thanks again.

Dan

 
 Regards,
 
 Chandru,
 
 www.mafiree.com
 
 On Mon, Jan 12, 2009 at 9:07 AM, Daniel Kasak
 d...@entropy.homelinux.orgwrote:
 
 Hi all. I have a 30GB innodb-only database in mysql-5.0.54. I have
 always done nightly backups with:

 mysqldump --opt db_name  db_name.sql -p

 Recently this started failing with:
 Error 2013: Lost connection to MySQL server

 I have checked all tables for corruption - nothing found. Also as far as
 I can tell there are no issues with clients using the database. There
 have been no crashes since I did a full restore. So I assume we can rule
 out corruption.

 I have searched around for the error message, and found people
 discussing the max_allowed_packet option. I've tried increasing the
 server's max_allowed_packet to many different values. Currently it's at
 128M, which is *way* over the default. I have also used the
 --max_allowed_packet option simultaneously with mysqldump. And lastly, I
 have been restarting the server after each my.cnf change.

 The data was inserted via the 'dbmail' application
 ( http://www.dbmail.org ), while the server was set up with the default
 max_allowed_packet size. DBMail breaks up message into chunks, and
 stores these chunks in individual records. I'm not sure what the default
 size of these chunks is, but I belive it's a reasonable value anyway.

 What next? I *must* get regular backups working again ...

 Dan


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Re: mysqldump: Error 2013: Lost connection to MySQL server

2009-01-12 Thread Aaron Blew
I'm also having a similar issue with some tables I've been trying to dump
(total data set is around 3TB).  I'm dumping directly from one host to
another (mysqldump -hSOURCE DATABASE | mysql -hLOCALHOST DATABASE) using
mysql 4.1.22.  One system is Solaris 10 SPARC, while the other is Solaris 10
x64 (64bit MySQL as well).

I wrote a script that starts a mysqldump process for each table within a
database, which shouldn't be a problem since the host currently has around
12G unused memory.  Midway through the dump I seem to lose the connection as
Dan described.  After attempting to drop/re-import (using a single process),
the larger tables continue to fail (though at different points) while some
of the small-medium sized tables made it across.

Anyone else run into this before? Ideas?

Thanks,
-Aaron


Re: lost connection to mysql server during query errors

2008-10-30 Thread Moon's Father
In my experiences, there're three reasons below.
1. Your network is not stable.
2. Your mysqld's parameter called max_allowed_packet is adjusted too small,
trying to increase it.
3. Your mysqld's parameter called connect_timeout is  adjusted too small,
trying to increase it.
On Thu, Oct 30, 2008 at 1:05 PM, mos [EMAIL PROTECTED] wrote:

 At 10:21 PM 10/29/2008, you wrote:

 I've never had a lot of luck tracking down this sort of problem. One
 thing I've found to be a good first step is to add each server
 involved to the other server's /etc/hosts file (and restart MySQL so
 it notices).

 Don't have much more to offer other than the usual suspects: recent
 versions, persistent vs. non-persistent connections, etc. A long shot
 would be to make sure your always talking to the same database server-
 if you're doing, say, DNS round-robin or load balancing or something,
 maybe you're getting shunted to a different db server and it's killing
 the connection... don't know what your setup is. Another long shot in
 a multi-db-server config would be to make sure they all have different
 server ID's.

 Good luck... hopefully someone else has better advice :)

 Jake


 Just a guess, but maybe it's your network card?

 I'm using MySQL 5.01 with MyISAM tables and my application will
 occasionally hang for hours in the midst of executing a simple 1 table
 Select statement. I usually end up killing the program. There are no
 processes running on the MySQL server. I think the problem was the number of
 connections the program created. Although there were only at most 10
 simultaneous connections, my program when the query finished executing, it
 threw the connection away and recreated a new one for each query, and MySQL
 reported there were some 10k connections made to the server. I ended up
 using connection pooling and now the number of connections reaches a high of
 around 10 and I haven't had the problem since.

 Mike

  On Wed, Oct 29, 2008 at 2:47 AM, Waynn Lue [EMAIL PROTECTED] wrote:
  We've started seeing mysql errors in the logs, and when i look at the
 output
  of mysql_error() (in php), i get lost connection to mysql server during
  query. Here's an example stack trace:
 
  'Can't connect to name database [Lost connection to MySQL server
 during
  query]'
 
  Similarly, we're seeing stack traces here as well:
 
  'Can't connect to name database []'
 
  I usually only see this mesasge when I don't use a connection for awhile
 and
  it timeouts, but in this case, the connection is only opened for the
  duration of a script, which can't be running for more than a second. The
  mysql error logs don't show anything, and wait_timeout is set to 28800.
 
  At first, I thought it was because I was calling mysql_select_db too
 much,
  so I ended up using two mysql connections per page load, but that didn't
  seem to change anything. How can we prevent this error from happening,
 what
  else can I do to diagnose this further?  Google brings up some more
  discussions about it, but nothing seems related to this, like
 packetsize.
  This is happening when we select two ids from a database.  And SHOW
  PROCESSLIST shows that the number of connections aren't even coming
 close to
  max connections.
 
  Thanks for any advice,
  Waynn
 

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lost connection to mysql server during query errors

2008-10-29 Thread Waynn Lue
We've started seeing mysql errors in the logs, and when i look at the output
of mysql_error() (in php), i get lost connection to mysql server during
query. Here's an example stack trace:

'Can't connect to name database [Lost connection to MySQL server during
query]'

Similarly, we're seeing stack traces here as well:

'Can't connect to name database []'

I usually only see this mesasge when I don't use a connection for awhile and
it timeouts, but in this case, the connection is only opened for the
duration of a script, which can't be running for more than a second. The
mysql error logs don't show anything, and wait_timeout is set to 28800.

At first, I thought it was because I was calling mysql_select_db too much,
so I ended up using two mysql connections per page load, but that didn't
seem to change anything. How can we prevent this error from happening, what
else can I do to diagnose this further?  Google brings up some more
discussions about it, but nothing seems related to this, like packetsize.
This is happening when we select two ids from a database.  And SHOW
PROCESSLIST shows that the number of connections aren't even coming close to
max connections.

Thanks for any advice,
Waynn


Re: lost connection to mysql server during query errors

2008-10-29 Thread Jake Maul
I've never had a lot of luck tracking down this sort of problem. One
thing I've found to be a good first step is to add each server
involved to the other server's /etc/hosts file (and restart MySQL so
it notices).

Don't have much more to offer other than the usual suspects: recent
versions, persistent vs. non-persistent connections, etc. A long shot
would be to make sure your always talking to the same database server-
if you're doing, say, DNS round-robin or load balancing or something,
maybe you're getting shunted to a different db server and it's killing
the connection... don't know what your setup is. Another long shot in
a multi-db-server config would be to make sure they all have different
server ID's.

Good luck... hopefully someone else has better advice :)

Jake

On Wed, Oct 29, 2008 at 2:47 AM, Waynn Lue [EMAIL PROTECTED] wrote:
 We've started seeing mysql errors in the logs, and when i look at the output
 of mysql_error() (in php), i get lost connection to mysql server during
 query. Here's an example stack trace:

 'Can't connect to name database [Lost connection to MySQL server during
 query]'

 Similarly, we're seeing stack traces here as well:

 'Can't connect to name database []'

 I usually only see this mesasge when I don't use a connection for awhile and
 it timeouts, but in this case, the connection is only opened for the
 duration of a script, which can't be running for more than a second. The
 mysql error logs don't show anything, and wait_timeout is set to 28800.

 At first, I thought it was because I was calling mysql_select_db too much,
 so I ended up using two mysql connections per page load, but that didn't
 seem to change anything. How can we prevent this error from happening, what
 else can I do to diagnose this further?  Google brings up some more
 discussions about it, but nothing seems related to this, like packetsize.
 This is happening when we select two ids from a database.  And SHOW
 PROCESSLIST shows that the number of connections aren't even coming close to
 max connections.

 Thanks for any advice,
 Waynn


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Re: lost connection to mysql server during query errors

2008-10-29 Thread mos

At 10:21 PM 10/29/2008, you wrote:

I've never had a lot of luck tracking down this sort of problem. One
thing I've found to be a good first step is to add each server
involved to the other server's /etc/hosts file (and restart MySQL so
it notices).

Don't have much more to offer other than the usual suspects: recent
versions, persistent vs. non-persistent connections, etc. A long shot
would be to make sure your always talking to the same database server-
if you're doing, say, DNS round-robin or load balancing or something,
maybe you're getting shunted to a different db server and it's killing
the connection... don't know what your setup is. Another long shot in
a multi-db-server config would be to make sure they all have different
server ID's.

Good luck... hopefully someone else has better advice :)

Jake


Just a guess, but maybe it's your network card?

I'm using MySQL 5.01 with MyISAM tables and my application will 
occasionally hang for hours in the midst of executing a simple 1 table 
Select statement. I usually end up killing the program. There are no 
processes running on the MySQL server. I think the problem was the number 
of connections the program created. Although there were only at most 10 
simultaneous connections, my program when the query finished executing, it 
threw the connection away and recreated a new one for each query, and MySQL 
reported there were some 10k connections made to the server. I ended up 
using connection pooling and now the number of connections reaches a high 
of around 10 and I haven't had the problem since.


Mike


On Wed, Oct 29, 2008 at 2:47 AM, Waynn Lue [EMAIL PROTECTED] wrote:
 We've started seeing mysql errors in the logs, and when i look at the 
output

 of mysql_error() (in php), i get lost connection to mysql server during
 query. Here's an example stack trace:

 'Can't connect to name database [Lost connection to MySQL server during
 query]'

 Similarly, we're seeing stack traces here as well:

 'Can't connect to name database []'

 I usually only see this mesasge when I don't use a connection for 
awhile and

 it timeouts, but in this case, the connection is only opened for the
 duration of a script, which can't be running for more than a second. The
 mysql error logs don't show anything, and wait_timeout is set to 28800.

 At first, I thought it was because I was calling mysql_select_db too much,
 so I ended up using two mysql connections per page load, but that didn't
 seem to change anything. How can we prevent this error from happening, what
 else can I do to diagnose this further?  Google brings up some more
 discussions about it, but nothing seems related to this, like packetsize.
 This is happening when we select two ids from a database.  And SHOW
 PROCESSLIST shows that the number of connections aren't even coming 
close to

 max connections.

 Thanks for any advice,
 Waynn


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Re: Lost connection

2008-08-26 Thread Moon's Father
Only increase max_allowed_packet is ok.

On Tue, Aug 19, 2008 at 5:49 PM, Warren Young [EMAIL PROTECTED] wrote:

 Mad Unix wrote:


 During the update of the MySQL DB (delete/insert), I keep getting the
 following message
 Lost connection to MySQL server during query...


 By default, the MySQL server drops a connection after 8 hours of receiving
 no queries on that connection.  This can happen in an application that keeps
 its connection open constantly, and people don't use it overnight or over a
 weekend.

 You can either increase the timeout in my.cnf, or you can ping the
 connection occasionally with mysql_ping().  Or, you can add code to your
 applications to detect this, and reestablish the connection and retry the
 command.

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Lost connection

2008-08-19 Thread Mad Unix
Hi all

During the update of the MySQL DB (delete/insert), I keep getting the
following message
Lost connection to MySQL server during query...
Any thoughts about this issue, could it be a network, code or tunning
problem ...

Thanks


Re: Lost connection

2008-08-19 Thread Warren Young

Mad Unix wrote:


During the update of the MySQL DB (delete/insert), I keep getting the
following message
Lost connection to MySQL server during query...


By default, the MySQL server drops a connection after 8 hours of 
receiving no queries on that connection.  This can happen in an 
application that keeps its connection open constantly, and people don't 
use it overnight or over a weekend.


You can either increase the timeout in my.cnf, or you can ping the 
connection occasionally with mysql_ping().  Or, you can add code to your 
applications to detect this, and reestablish the connection and retry 
the command.


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Re: Lost Connection each hour :(

2008-01-17 Thread Matthias Witte
On Tue, Jan 15, 2008 at 09:27:10PM +0100, MAS! wrote:
 Can anyone help me to understand why my site (php 4.4.2 / ubuntu  
 dapper) loose all connections to mysql server when /etc/cron/hourly  
 starts? (there are no process to start hourly, the directory is empty)

Is the assumption correct, that this happens each hour at exactly the
same time, in exact 60min intervals?

Grep the syslog then for corresponding CRON entries.

Hourly cronjobs will more likely be found in /etc/cron.d or in
/var/spool/cron/crontabs.

Regards,

Matthias Witte
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Re: Lost Connection each hour :(

2008-01-16 Thread MAS!


Il giorno 16 gen 2008, alle ore 02:59, Moon's Father ha scritto:


Post your error message here.


(from php)

Error message: mysql_connect(): Lost connection to MySQL server  
during query


and I have that for _each_ apache2 thread/php-page opened

MAS!


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Re: Lost Connection each hour :(

2008-01-16 Thread Moon's Father
Enter your mysql shell and enter the command:
set global max_allowed_packet=10M
The value of the variable can be set whatever you want .

On Jan 16, 2008 4:36 PM, MAS! [EMAIL PROTECTED] wrote:


 Il giorno 16 gen 2008, alle ore 02:59, Moon's Father ha scritto:

  Post your error message here.

 (from php)

 Error message: mysql_connect(): Lost connection to MySQL server
 during query

 and I have that for _each_ apache2 thread/php-page opened

 MAS!




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Re: Lost Connection each hour :(

2008-01-16 Thread MAS!

Enter your mysql shell and enter the command:
set global max_allowed_packet=10M


I have it setted at 32M, but that is not the problem; the data are  
not too much ...


and it's strange because _ALL_ clients seems to died/be disconnected  
each hour, when the hourly cron runs..




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Re: Lost Connection each hour :(

2008-01-16 Thread Moon's Father
You should give me an error message here.

On Jan 16, 2008 4:44 PM, MAS! [EMAIL PROTECTED] wrote:

  Enter your mysql shell and enter the command:
  set global max_allowed_packet=10M

 I have it setted at 32M, but that is not the problem; the data are
 not too much ...

 and it's strange because _ALL_ clients seems to died/be disconnected
 each hour, when the hourly cron runs..





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Re: Lost Connection each hour :(

2008-01-16 Thread Dušan Pavlica

Marco,

can you post values of wait_timeout and interactive_timeout variables. 
You can get them from SHOW VARIABLES output. If they are set to 3600 (1 
hour in secs), set them to something bigger like one week and then you 
will see if it helps or not. You can read more about those timeouts also 
in manual.


HTH,
Dusan

MAS! napsal(a):
Can anyone help me to understand why my site (php 4.4.2 / ubuntu 
dapper) loose all connections to mysql server when /etc/cron/hourly 
starts? (there are no process to start hourly, the directory is empty)


I have heavvy web/apache2 traffic on my site and that is not so nice 
for my users..


thank you in advance

regards

marco



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Re: Lost Connection each hour :(

2008-01-16 Thread MAS!
can you post values of wait_timeout and interactive_timeout  
variables. You can get them from SHOW VARIABLES output. If they are  
set to 3600 (1 hour in secs), set them to something bigger like one  
week and then you will see if it helps or not. You can read more about


+--+---+
| Variable_name| Value |
+--+---+
| connect_timeout  | 5 |
| delayed_insert_timeout   | 300   |
| innodb_lock_wait_timeout | 50|
| interactive_timeout  | 28800 |
| net_read_timeout | 30|
| net_write_timeout| 60|
| slave_net_timeout| 3600  |
| table_lock_wait_timeout  | 50|
| wait_timeout | 28800 |
+--+---+

:( may be I have to increase the net_% variables?


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Re: Lost Connection each hour :(

2008-01-16 Thread Dušan Pavlica

MAS! napsal(a):
can you post values of wait_timeout and interactive_timeout 
variables. You can get them from SHOW VARIABLES output. If they are 
set to 3600 (1 hour in secs), set them to something bigger like one 
week and then you will see if it helps or not. You can read more about


+--+---+
| Variable_name| Value |
+--+---+
| connect_timeout  | 5 |
| delayed_insert_timeout   | 300   |
| innodb_lock_wait_timeout | 50|
| interactive_timeout  | 28800 |
| net_read_timeout | 30|
| net_write_timeout| 60|
| slave_net_timeout| 3600  |
| table_lock_wait_timeout  | 50|
| wait_timeout | 28800 |
+--+---+

:( may be I have to increase the net_% variables?

I don't think that slave_net_timeout can cause you those problems but 
you can increase its value and you will see if it  it helps or not. But 
read about those timeouts anyway. Also try to look at: 
http://dev.mysql.com/doc/refman/5.0/en/gone-away.html


Dusan

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Re: Lost Connection each hour :(

2008-01-16 Thread Baron Schwartz
Hi,

On Jan 16, 2008 3:36 AM, MAS! [EMAIL PROTECTED] wrote:

 Il giorno 16 gen 2008, alle ore 02:59, Moon's Father ha scritto:

  Post your error message here.

 (from php)

 Error message: mysql_connect(): Lost connection to MySQL server
 during query

 and I have that for _each_ apache2 thread/php-page opened

 MAS!



MySQL is probably crashing and restarting.  Look in the error logs for clues.

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Lost Connection each hour :(

2008-01-15 Thread MAS!
Can anyone help me to understand why my site (php 4.4.2 / ubuntu  
dapper) loose all connections to mysql server when /etc/cron/hourly  
starts? (there are no process to start hourly, the directory is empty)


I have heavvy web/apache2 traffic on my site and that is not so nice  
for my users..


thank you in advance

regards

marco

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Re: Lost Connection each hour :(

2008-01-15 Thread Moon's Father
Post your error message here.

On Jan 16, 2008 4:27 AM, MAS! [EMAIL PROTECTED] wrote:

 Can anyone help me to understand why my site (php 4.4.2 / ubuntu
 dapper) loose all connections to mysql server when /etc/cron/hourly
 starts? (there are no process to start hourly, the directory is empty)

 I have heavvy web/apache2 traffic on my site and that is not so nice
 for my users..

 thank you in advance

 regards

 marco

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Lost Connection

2007-07-23 Thread krishna chandra prajapati

Hi All,

I have connect to mysql-server using client. When i run the query it give
message lost connection to mysql. The details is as below.

mysql select user_id, user_name from user_info;
ERROR 2013 (HY000): Lost connection to MySQL server during query.

System configuration is
Pentium 2.6 Ghz
Ram 1 GB

My.cnf
key_buffer  = 16M
max_allowed_packet  = 16M
thread_stack= 128K
thread_cache_size   = 8
max_connections= 50
#table_cache= 64
#thread_concurrency = 10

sort_buffer_size= 1M
innodb_buffer_pool_size = 70M
innodb_log_buffer_size  = 2M
innodb_additional_mem_pool_size = 8M

table_cache = 64
thread_cache_size   = 8
read_buffer_size= 1M
read_rnd_buffer_size= 2M
myisam_sort_buffer_size = 4M


#
# * Query Cache Configuration
#
query_cache_limit   = 1M
query_cache_size= 16M

I don't understand  why the connection get lost during simplest query also.

Regards,
Krishna


Lost Connection

2007-07-23 Thread krishna chandra prajapati

Hi All,

I have connect to mysql-server using client. When i run the query it give
message lost connection to mysql. The details is as below.

mysql select user_id, user_name from user_info;
ERROR 2013 (HY000): Lost connection to MySQL server during query.

System configuration is
Pentium 2.6 Ghz
Ram 1 GB

My.cnf
key_buffer  = 16M
max_allowed_packet  = 16M
thread_stack= 128K
thread_cache_size   = 8
max_connections= 50
#table_cache= 64
#thread_concurrency = 10

sort_buffer_size= 1M
innodb_buffer_pool_size = 70M
innodb_log_buffer_size  = 2M
innodb_additional_mem_pool_size = 8M

table_cache = 64
thread_cache_size   = 8
read_buffer_size= 1M
read_rnd_buffer_size= 2M
myisam_sort_buffer_size = 4M


#
# * Query Cache Configuration
#
query_cache_limit   = 1M
query_cache_size= 16M

I don't understand  why the connection get lost during simplest query also.

Regards,
Krishna


Re: Lost Connection

2007-07-23 Thread Carlos Proal


This can be a serious issue, maybe a sign of some kind of  data corruption.
If you lost the connection, probably the server is restarting (you can 
check that on the error log), do this happen only with this table ?


Carlos


krishna chandra prajapati wrote:

Hi All,

I have connect to mysql-server using client. When i run the query it give
message lost connection to mysql. The details is as below.

mysql select user_id, user_name from user_info;
ERROR 2013 (HY000): Lost connection to MySQL server during query.

System configuration is
Pentium 2.6 Ghz
Ram 1 GB

My.cnf
key_buffer  = 16M
max_allowed_packet  = 16M
thread_stack= 128K
thread_cache_size   = 8
max_connections= 50
#table_cache= 64
#thread_concurrency = 10

sort_buffer_size= 1M
innodb_buffer_pool_size = 70M
innodb_log_buffer_size  = 2M
innodb_additional_mem_pool_size = 8M

table_cache = 64
thread_cache_size   = 8
read_buffer_size= 1M
read_rnd_buffer_size= 2M
myisam_sort_buffer_size = 4M


#
# * Query Cache Configuration
#
query_cache_limit   = 1M
query_cache_size= 16M

I don't understand  why the connection get lost during simplest query 
also.


Regards,
Krishna




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Error 2013 (Lost Connection to MySQL Server) On A Solaris 10 Box

2007-06-12 Thread Rajesh Mehrotra
Hi,
 
We copied over a test copy of a multi-GB database to a new Sun V440 box
running Solaris 10 (64-bit) with a 64-bit MySQL install. When trying to
connect to the database, we consistently get Error 2013.
 
Any pointers?
 
TIA.
 
Sincerely,

Raj Mehrotra
hccs
[EMAIL PROTECTED] mailto:[EMAIL PROTECTED] 



Re: Error 2013 (Lost Connection to MySQL Server) On A Solaris 10 Box

2007-06-12 Thread Baron Schwartz

Rajesh Mehrotra wrote:

Hi,
 
We copied over a test copy of a multi-GB database to a new Sun V440 box

running Solaris 10 (64-bit) with a 64-bit MySQL install. When trying to
connect to the database, we consistently get Error 2013.
 
Any pointers?


Check the server's error log and see if there's anything in it.

Baron

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A question about how to debug the error 2013, 'Lost connection to MySQL server during query'

2007-05-23 Thread aiton
I am running the 64 bit version of mysql server 5.1.18, and on the
client side I am running python with the mysqldb module.  While
running a very large insert query I get the following error :

2013, 'Lost connection to MySQL server during query'

I have --log-warnings set to 3, but I get no corresponding errors in
the error log.

The question is : how do I go about debugging this problem?


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Re: A question about how to debug the error 2013, 'Lost connection to MySQL server during query'

2007-05-23 Thread Sebastian Mendel
[EMAIL PROTECTED] schrieb:
 I am running the 64 bit version of mysql server 5.1.18, and on the
 client side I am running python with the mysqldb module.  While
 running a very large insert query I get the following error :
 
 2013, 'Lost connection to MySQL server during query'
 
 I have --log-warnings set to 3, but I get no corresponding errors in
 the error log.
 
 The question is : how do I go about debugging this problem?

the most common error in this case is a crash of the thread processing your
query


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Re: Mysterious 'Lost connection' errors

2007-05-11 Thread Jon Ribbens
On Thu, May 10, 2007 at 05:17:12PM +0100, Jon Ribbens wrote:
 I suspect some sort of bug in the MySQLd authentication code.

I've managed to discover using --debug that it's due to MySQLd failing
to handle EINTR from read() in the authentication stage.

I've filed a bug report: http://bugs.mysql.com/bug.php?id=28359

Does anyone know how/where to best attract the attention of a MySQL
developer to this bug?

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Re: Mysterious 'Lost connection' errors

2007-05-10 Thread Jon Ribbens
On Thu, May 10, 2007 at 03:37:26AM +0100, Jon Ribbens wrote:
 I've just upgraded all the clients and servers to 5.0.41 (which looks
 like it just came out); I'll see what happens.

It hasn't solved the problem, but it has changed the error message to:

  OperationalError:
(2013, Lost connection to MySQL server at 'reading
authorization packet', system error: 0)

(still nothing in the logfile).

Does this ring any bells for anyone?

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Re: Mysterious 'Lost connection' errors

2007-05-10 Thread mos

At 06:03 AM 5/10/2007, you wrote:

reading
authorization packet


If you do a google search:
http://www.google.ca/search?q=lost+mysql+connection+%22reading+authorization+packet%22hl=enstart=90sa=N

you'll find about a hundred web sites encountering the exact same error. 
Ironically these errors were caught by the google indexing engine when the 
site failed to display the HTML page, so it got the error message instead. 
If you click on the link today, the error of course is gone. But if you 
click on the cache link, you'll see the same error message as it occurred 
(frozen in time as it were).


Maybe the problem is with the hardware, like your network card 
disconnecting from the MySQL server machine? Or TCP/IP?


Mike 


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Re: Mysterious 'Lost connection' errors

2007-05-10 Thread Jon Ribbens
On Thu, May 10, 2007 at 08:58:37AM -0600, mos wrote:
 If you do a google search:
 http://www.google.ca/search?q=lost+mysql+connection+%22reading+authorization+packet%22hl=enstart=90sa=N
 
 you'll find about a hundred web sites encountering the exact same error. 

Indeed, I noticed that ;-)

 Maybe the problem is with the hardware, like your network card 
 disconnecting from the MySQL server machine? Or TCP/IP?

The only comment I could find from a MySQL employee suggested that.
But I don't believe them. There are no other network problems visible,
and the 'authorization packet' is mid-way through the connection setup
(i.e. the TCP/IP connection has already been successfully used to both
send and receive data if we get as far as the 'authorization packet').
I suspect some sort of bug in the MySQLd authentication code.

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Mysterious 'Lost connection' errors

2007-05-09 Thread Jon Ribbens
We are using MySQL 5.0.27 on RedHat Enterprise Linux ES release 4,
and the MySQL-python-1.2.1_p2 connector.

We are getting intermittent mysterious errors as follows:

  OperationalError:
(2013, 'Lost connection to MySQL server during query')

when attempting to connect to the MySQL server (note: on the actual
connection attempt, this is before even trying a query). There doesn't
appear to be any particular pattern to when these errors occur.

The client and server are on different machines, communicating via
TCP, but I have not managed to find any networking problems.

Does anyone have any suggestions as to what the problem might be, or
how we might go about trying to solve it?

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Re: Mysterious 'Lost connection' errors

2007-05-09 Thread Michael Dykman

we ran into a similar condition using 5.0.27 in a PHP application.. in
our case it had nothing to do with the version.  check your server
logs for evidence of a restart. What we had done was naively imported
innodb extents from a v.4 datbase which seemed to work fine at first
but in fact setup an edge condition whereby certain perfectly valid
SQL was triggering a GPF on the server.  I realize that's quite
unlikely that you have performed a similar sloppy import but there is
likely some edge condition on your server (wierd permissions in the
data directory, corruoted tables, etc.) but I still recommend that you
scrutinize your server logs for evidence of a spontaneous restart.  If
that turns up nothing, you might try a fresh install of mysql on a
separate host to see if the problem persists.  Worst case, there is an
upgrade patch available which might magically raise you above the
problem.

On 5/9/07, Jon Ribbens [EMAIL PROTECTED] wrote:

We are using MySQL 5.0.27 on RedHat Enterprise Linux ES release 4,
and the MySQL-python-1.2.1_p2 connector.

We are getting intermittent mysterious errors as follows:

  OperationalError:
(2013, 'Lost connection to MySQL server during query')

when attempting to connect to the MySQL server (note: on the actual
connection attempt, this is before even trying a query). There doesn't
appear to be any particular pattern to when these errors occur.

The client and server are on different machines, communicating via
TCP, but I have not managed to find any networking problems.

Does anyone have any suggestions as to what the problem might be, or
how we might go about trying to solve it?

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Re: Mysterious 'Lost connection' errors

2007-05-09 Thread Jon Ribbens
On Wed, May 09, 2007 at 09:22:34AM -0400, Michael Dykman wrote:
 I realize that's quite unlikely that you have performed a similar
 sloppy import but there is likely some edge condition on your server
 (wierd permissions in the data directory, corruoted tables, etc.)
 but I still recommend that you scrutinize your server logs for
 evidence of a spontaneous restart.  If that turns up nothing, you
 might try a fresh install of mysql on a separate host to see if the
 problem persists.

Thanks for your suggestions. The hostname.err log contains absolutely
nothing however, just the usual 'mysqld started' and 'Version:' lines.
Certainly there's nothing about any restart.

 Worst case, there is an upgrade patch available which might
 magically raise you above the problem.

Indeed, I see there is 5.0.37 now. I'd rather not go through an
upgrade though unless I knew it was likely to fix the problem.

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Re: Mysterious 'Lost connection' errors

2007-05-09 Thread Michael Dykman

When we first examined our server logs, we saw the same..  in our case
(again) it was only when we slowed down and examined the timestamps on
the start/stop messages that we realized that the server was
restarting at unexpected intervals.  Over the course of our
development, we came across this issue a couple of times..  the
problem was never found to be on the clint or have anything to do with
nefarious sql being executed..  we found binary data issues, build
issues (how did you get your binaries?  pre-compiled from the archive
or build your own? and for what OS?) and server config problems..
When you do find the cause let me know; Im thinking of starting a
collection :-)

- michael


On 5/9/07, Jon Ribbens [EMAIL PROTECTED] wrote:

On Wed, May 09, 2007 at 09:22:34AM -0400, Michael Dykman wrote:
 I realize that's quite unlikely that you have performed a similar
 sloppy import but there is likely some edge condition on your server
 (wierd permissions in the data directory, corruoted tables, etc.)
 but I still recommend that you scrutinize your server logs for
 evidence of a spontaneous restart.  If that turns up nothing, you
 might try a fresh install of mysql on a separate host to see if the
 problem persists.

Thanks for your suggestions. The hostname.err log contains absolutely
nothing however, just the usual 'mysqld started' and 'Version:' lines.
Certainly there's nothing about any restart.

 Worst case, there is an upgrade patch available which might
 magically raise you above the problem.

Indeed, I see there is 5.0.37 now. I'd rather not go through an
upgrade though unless I knew it was likely to fix the problem.

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Re: Mysterious 'Lost connection' errors

2007-05-09 Thread mos
We also have random lost connections on simple queries, but we are running 
MySQL v5.024a on Windows XP. We've checked the logs and nothing abnormal 
has turned up and we're using only MyISAM tables with InnoDb disabled.


The only thing that I could suggest is to look for other copies of 
libmysql.dll and make sure you don't have an older version on your path. 
3rd party products like to install older copies of these files.


As for me, I'll have to upgrade MySQL in the hopes of correcting the 
problem. It is a PIA to come in in the morning only to find the overnight 
job has hung because a simple query has lost the connection. :(


Mike

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Re: Mysterious 'Lost connection' errors

2007-05-09 Thread Jon Ribbens
On Wed, May 09, 2007 at 11:17:59AM -0400, Michael Dykman wrote:
 When we first examined our server logs, we saw the same..  in our case
 (again) it was only when we slowed down and examined the timestamps on
 the start/stop messages that we realized that the server was
 restarting at unexpected intervals.

The last restart, according to both the content of the log, and the
operating system timestamp on the log file itself, was 6 days ago.
The 'lost connection' message has happened several times today,
however.

 (how did you get your binaries?  pre-compiled from the archive
 or build your own? and for what OS?)

We used the official RPMs from www.mysql.com for our exact version of
RedHat Linux (RedHat Enterprise Linux ES Release 4, 64-bit).

 When you do find the cause let me know; Im thinking of starting a
 collection :-)

I'll keep you informed ;-)

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Re: Mysterious 'Lost connection' errors

2007-05-09 Thread Mathieu Bruneau
Jon Ribbens a écrit :
 We are using MySQL 5.0.27 on RedHat Enterprise Linux ES release 4,
 and the MySQL-python-1.2.1_p2 connector.
 
 We are getting intermittent mysterious errors as follows:
 
   OperationalError:
 (2013, 'Lost connection to MySQL server during query')
 
 when attempting to connect to the MySQL server (note: on the actual
 connection attempt, this is before even trying a query). There doesn't
 appear to be any particular pattern to when these errors occur.
 
 The client and server are on different machines, communicating via
 TCP, but I have not managed to find any networking problems.
 
 Does anyone have any suggestions as to what the problem might be, or
 how we might go about trying to solve it?
 

We found a similar issue because we were using persistent connection in
php and had a firewall between the mysql and the webserver. The problem
is that our persistent connection were setup for lasting up to something
like 8 hours but the firewall was keeping state of the connection only
for up to 1 hour when no data was transferred. After the firewall had
flushed the state of the connection and that the webserver were trying
to communicate through it, he was reporting Lost connection to mysql
server during query

We adjust the setting of the persistent connection to 45 mins and the
problem went away.

This don't have anything to do with the version, but that was with 4.1 :)

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Re: Mysterious 'Lost connection' errors

2007-05-09 Thread Jon Ribbens
On Wed, May 09, 2007 at 10:07:41PM -0400, Mathieu Bruneau wrote:
 We found a similar issue because we were using persistent connection in
 php and had a firewall between the mysql and the webserver. The problem
 is that our persistent connection were setup for lasting up to something
 like 8 hours but the firewall was keeping state of the connection only
 for up to 1 hour when no data was transferred. After the firewall had
 flushed the state of the connection and that the webserver were trying
 to communicate through it, he was reporting Lost connection to mysql
 server during query

It's a good suggestion, but I'm pretty sure there's no firewall
acting between the client and the server, and that the connection is
not being persisted (i.e. all connection attempts are genuine new
connections).

I've just upgraded all the clients and servers to 5.0.41 (which looks
like it just came out); I'll see what happens.

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ERROR 2013 (HY000): Lost connection to MySQL server during query, 061220 14:48:44 mysqld restarted

2006-12-20 Thread Kieran Kelleher
I have MySQL 4.1.22 source installation on a 1.66 Intel Core Duo Mac  
Mini running OS X Server 10.4.8. It is a slave replicating to a  
master over ssl. Replication works fine, however I get this error  
always if I execute the STOP SLAVE statement

([EMAIL PROTECTED]) (none) stop slave;
ERROR 2013 (HY000): Lost connection to MySQL server during query
([EMAIL PROTECTED]) (none) 061220 14:48:44  mysqld restarted

Also, if I execute mysqladmin shutdown, it restarts also
slmini:/usr/local admin$ mysqladmin -u root -p shutdown
Enter password:
slmini:/usr/local admin$ 061220 14:59:19  mysqld restarted

The source has been compiled with SSL feature.

I have exact same installation on a single CPU powerpc G4 XServe with  
no problems.


My installation procedure/flags are here:

Any ideas what the problem might be? Should I just rebuild the OS  
from scratch? Could it be corrupt data that needs to be recopied form  
the master? I'm baffled at this point.


Regards, Kieran

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Re: ERROR 2013 (HY000): Lost connection to MySQL server during query, 061220 14:48:44 mysqld restarted

2006-12-20 Thread Kieran Kelleher
I left out URL to source compilation procedure and flags in original  
message. Here it is:
http://homepage.mac.com/kelleherk/iblog/C711669388/E20061121141451/ 
index.html


ANy advice would be really appreciated.

Regards, Kieran

On Dec 20, 2006, at 3:08 PM, Kieran Kelleher wrote:

I have MySQL 4.1.22 source installation on a 1.66 Intel Core Duo  
Mac Mini running OS X Server 10.4.8. It is a slave replicating to a  
master over ssl. Replication works fine, however I get this error  
always if I execute the STOP SLAVE statement

([EMAIL PROTECTED]) (none) stop slave;
ERROR 2013 (HY000): Lost connection to MySQL server during query
([EMAIL PROTECTED]) (none) 061220 14:48:44  mysqld restarted

Also, if I execute mysqladmin shutdown, it restarts also
slmini:/usr/local admin$ mysqladmin -u root -p shutdown
Enter password:
slmini:/usr/local admin$ 061220 14:59:19  mysqld restarted

The source has been compiled with SSL feature.

I have exact same installation on a single CPU powerpc G4 XServe  
with no problems.


My installation procedure/flags are here:

Any ideas what the problem might be? Should I just rebuild the OS  
from scratch? Could it be corrupt data that needs to be recopied  
form the master? I'm baffled at this point.


Regards, Kieran

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Re: ERROR 2013 (HY000): Lost connection to MySQL server during query, 061220 14:48:44 mysqld restarted

2006-12-20 Thread Kieran Kelleher

Replying to myself again...

OK, some more light on the subject. I did a complete dump of the  
master and reloaded the slave thinking maybe I had corrupt tables or  
something. Having started the slave with skip-start-slave, I found  
that I could stop mysqld on command line using mysqladmin without  
problems. As soon as I started the slave and tried to issue a stop  
slave, then the crash happened again. So basically the crash only  
happens if we try and stop the slave threads. This wouls explain why  
mysaadmin shutdown crashed when slave IO was on, but not when slave  
IO was stopped. Here is error I got this time for stop slave:


 stop slave;
ERROR 2013 (HY000): Lost connection to MySQL server during query
([EMAIL PROTECTED]) (none) /usr/local/mysql/bin/mysqld_safe: line  
1:   401 Illegal instruction nohup /usr/local/mysql/libexec/ 
mysqld --defaults-extra-file=/usr/local/mysql/data/my.cnf --basedir=/ 
usr/local/mysql --datadir=/usr/local/mysql/data --user=mysql --pid- 
file=/usr/local/mysql/data/slmini.local.pid --socket=/tmp/mysql.sock  
--skip-slave-start /usr/local/mysql/data/slmini.local.err 21

061220 16:02:05  mysqld restarted

Any ideas what could be wrong here or is this possibly a bug?

Regards, Kieran

On Dec 20, 2006, at 3:08 PM, Kieran Kelleher wrote:

I have MySQL 4.1.22 source installation on a 1.66 Intel Core Duo  
Mac Mini running OS X Server 10.4.8. It is a slave replicating to a  
master over ssl. Replication works fine, however I get this error  
always if I execute the STOP SLAVE statement

([EMAIL PROTECTED]) (none) stop slave;
ERROR 2013 (HY000): Lost connection to MySQL server during query
([EMAIL PROTECTED]) (none) 061220 14:48:44  mysqld restarted

Also, if I execute mysqladmin shutdown, it restarts also
slmini:/usr/local admin$ mysqladmin -u root -p shutdown
Enter password:
slmini:/usr/local admin$ 061220 14:59:19  mysqld restarted

The source has been compiled with SSL feature.

I have exact same installation on a single CPU powerpc G4 XServe  
with no problems.


My installation procedure/flags are here:

Any ideas what the problem might be? Should I just rebuild the OS  
from scratch? Could it be corrupt data that needs to be recopied  
form the master? I'm baffled at this point.


Regards, Kieran

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lost connection to MySQL server during qu ery

2006-11-29 Thread wq
i've done a non-stop insert test for 3 days, using mysql++ to connect to MySQL 
server 
i only use one connection, if it fails to execute ,it will reconnect
during this test , this exception came out twice 
 
is that because of the server or the client?

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